Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_443179 20 390 XP_005266703 20 390 NP_004841 17 3301 NP_065829 17 3301 XP_005246247 17 3301 NP_001092753 17 4312 NP_001092752 17 4312 XP_005271889 17 4312 XP_006718066 17 4312 XP_005271888 17 4312 XP_006718065 17 4312 XP_005271886 17 4312 XP_005271885 17 4312 XP_006718064 17 4312 NP_005665 17 4312 NP_001092754 17 4312 NP_116166 16 5631 NP_008999 16 5631 NP_001076048 16 5631 NP_001076047 16 5631 NP_001076045 16 5631 NP_001026865 16 5631 XP_005261494 16 5631 XP_005261489 16 5631 XP_005261488 16 5631 XP_005261487 16 5631 XP_006724250 16 5631 XP_006724174 16 5631 XP_006724173 16 5631 XP_005273528 16 5631 XP_006716388 16 5631 NP_001137296 16 7355 NP_060488 16 7355 XP_005269054 16 7355 NP_060395 15 9605 NP_004696 15 9605 NP_060309 15 9605 XP_006721274 15 9605 XP_006716870 15 9605 XP_006716869 15 9605 XP_006716868 15 9605 XP_006716867 15 9605>NP_443179 Length = 2170 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 YAKIYTAEA 9 YAKIY AEA Sbjct: 1991 YAKIYAAEA 1999>XP_005266703 Length = 1501 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 YAKIYTAEA 9 YAKIY AEA Sbjct: 1322 YAKIYAAEA 1330>NP_004841 Length = 1388 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 YAKIYTAE 8 +AK YTAE Sbjct: 190 WAKFYTAE 197>NP_065829 Length = 1907 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 YAKIYTAEA 9 Y KI+ AEA Sbjct: 1683 YCKIFAAEA 1691>XP_005246247 Length = 1417 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 YAKIYTAE 8 +AK YTAE Sbjct: 190 WAKFYTAE 197>NP_001092753 Length = 458 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 YAKIYTAE 8 Y KI+TAE Sbjct: 197 YEKIHTAE 204>NP_001092752 Length = 458 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 YAKIYTAE 8 Y KI+TAE Sbjct: 197 YEKIHTAE 204>XP_005271889 Length = 458 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 YAKIYTAE 8 Y KI+TAE Sbjct: 197 YEKIHTAE 204>XP_006718066 Length = 458 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 YAKIYTAE 8 Y KI+TAE Sbjct: 197 YEKIHTAE 204>XP_005271888 Length = 458 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 YAKIYTAE 8 Y KI+TAE Sbjct: 197 YEKIHTAE 204>XP_006718065 Length = 458 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 YAKIYTAE 8 Y KI+TAE Sbjct: 197 YEKIHTAE 204>XP_005271886 Length = 458 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 YAKIYTAE 8 Y KI+TAE Sbjct: 197 YEKIHTAE 204>XP_005271885 Length = 458 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 YAKIYTAE 8 Y KI+TAE Sbjct: 197 YEKIHTAE 204>XP_006718064 Length = 500 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 YAKIYTAE 8 Y KI+TAE Sbjct: 239 YEKIHTAE 246>NP_005665 Length = 458 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 YAKIYTAE 8 Y KI+TAE Sbjct: 197 YEKIHTAE 204>NP_001092754 Length = 458 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 YAKIYTAE 8 Y KI+TAE Sbjct: 197 YEKIHTAE 204>NP_116166 Length = 1338 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KIYTAEA 9 ++YTAEA Sbjct: 448 RVYTAEA 454>NP_008999 Length = 340 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 YAKIYTAE 8 YA+ YT+E Sbjct: 190 YARAYTSE 197>NP_001076048 Length = 450 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 YAKIYTAE 8 Y ++YTA+ Sbjct: 413 YGRVYTAD 420>NP_001076047 Length = 451 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 YAKIYTAE 8 Y ++YTA+ Sbjct: 414 YGRVYTAD 421>NP_001076045 Length = 376 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 YAKIYTAE 8 Y ++YTA+ Sbjct: 339 YGRVYTAD 346>NP_001026865 Length = 380 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 YAKIYTAE 8 Y ++YTA+ Sbjct: 343 YGRVYTAD 350>XP_005261494 Length = 381 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 YAKIYTAE 8 Y ++YTA+ Sbjct: 344 YGRVYTAD 351>XP_005261489 Length = 446 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 YAKIYTAE 8 Y ++YTA+ Sbjct: 409 YGRVYTAD 416>XP_005261488 Length = 447 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 YAKIYTAE 8 Y ++YTA+ Sbjct: 410 YGRVYTAD 417>XP_005261487 Length = 448 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 YAKIYTAE 8 Y ++YTA+ Sbjct: 411 YGRVYTAD 418>XP_006724250 Length = 452 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 YAKIYTAE 8 Y ++YTA+ Sbjct: 415 YGRVYTAD 422>XP_006724174 Length = 326 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 YAKIYTAE 8 YA+ YT+E Sbjct: 176 YARAYTSE 183>XP_006724173 Length = 340 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 YAKIYTAE 8 YA+ YT+E Sbjct: 190 YARAYTSE 197>XP_005273528 Length = 813 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KIYTAEA 9 ++YTAEA Sbjct: 448 RVYTAEA 454>XP_006716388 Length = 1314 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KIYTAEA 9 ++YTAEA Sbjct: 424 RVYTAEA 430>NP_001137296 Length = 547 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 YAKIYTAE 8 Y+K+YT + Sbjct: 402 YSKVYTLD 409>NP_060488 Length = 547 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 YAKIYTAE 8 Y+K+YT + Sbjct: 402 YSKVYTLD 409>XP_005269054 Length = 547 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 YAKIYTAE 8 Y+K+YT + Sbjct: 402 YSKVYTLD 409>NP_060395 Length = 1909 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 YAKIYT 6 YAK YT Sbjct: 612 YAKFYT 617>NP_004696 Length = 761 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 YAKIYTAEA 9 Y K+YT+++ Sbjct: 740 YIKLYTSKS 748>NP_060309 Length = 544 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 YAKIYT 6 YAKI+T Sbjct: 496 YAKIFT 501>XP_006721274 Length = 488 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 YAKIYT 6 YAKI+T Sbjct: 440 YAKIFT 445>XP_006716870 Length = 1456 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 YAKIYT 6 YAK YT Sbjct: 110 YAKFYT 115>XP_006716869 Length = 1722 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 YAKIYT 6 YAK YT Sbjct: 376 YAKFYT 381>XP_006716868 Length = 1894 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 YAKIYT 6 YAK YT Sbjct: 612 YAKFYT 617>XP_006716867 Length = 1958 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 YAKIYT 6 YAK YT Sbjct: 612 YAKFYT 617Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.313 0.121 0.321 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 411,465 Number of extensions: 452 Number of successful extensions: 42 Number of sequences better than 10000.0: 42 Number of HSP's gapped: 42 Number of HSP's successfully gapped: 42 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.7 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |