Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001895 20 509 NP_001091680 20 509 NP_001091679 20 509 XP_006713048 20 509 XP_006713047 20 509 XP_006713046 20 509 XP_005264943 20 509 NP_002221 18 1482 NP_068831 18 1482 XP_006721941 18 1482 XP_006721940 18 1482 XP_006721939 18 1482 XP_006721938 18 1482 XP_006721937 18 1482 XP_006721936 18 1482 XP_006721935 18 1482 XP_006721934 18 1482 XP_005257370 18 1482 NP_000229 16 7355 NP_001191727 16 7355 NP_742053 16 7355 NP_742054 16 7355 NP_001229825 16 7355 NP_001229826 16 7355 NP_055477 16 7355 NP_001129501 16 7355 NP_110406 16 7355 NP_001265848 16 7355 NP_001265849 16 7355 NP_775115 16 7355 XP_006724448 16 7355 XP_006724447 16 7355 XP_005261922 16 7355 XP_005261921 16 7355 XP_005261920 16 7355 XP_005261919 16 7355 XP_005260020 16 7355 XP_006716040 16 7355 NP_060152 16 7355 NP_001192136 15 9605 NP_919231 15 9605 NP_001192135 15 9605 NP_055099 15 9605 NP_001014839 15 9605 XP_005261221 15 9605 NP_001014841 15 9605>NP_001895 Length = 781 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 YAAAVLFQM 9 YAAAVLF+M Sbjct: 654 YAAAVLFRM 662>NP_001091680 Length = 781 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 YAAAVLFQM 9 YAAAVLF+M Sbjct: 654 YAAAVLFRM 662>NP_001091679 Length = 781 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 YAAAVLFQM 9 YAAAVLF+M Sbjct: 654 YAAAVLFRM 662>XP_006713048 Length = 720 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 YAAAVLFQM 9 YAAAVLF+M Sbjct: 654 YAAAVLFRM 662>XP_006713047 Length = 774 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 YAAAVLFQM 9 YAAAVLF+M Sbjct: 647 YAAAVLFRM 655>XP_006713046 Length = 774 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 YAAAVLFQM 9 YAAAVLF+M Sbjct: 647 YAAAVLFRM 655>XP_005264943 Length = 781 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 YAAAVLFQM 9 YAAAVLF+M Sbjct: 654 YAAAVLFRM 662>NP_002221 Length = 745 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 YAAAVLFQM 9 YAAAVLF++ Sbjct: 644 YAAAVLFRI 652>NP_068831 Length = 745 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 YAAAVLFQM 9 YAAAVLF++ Sbjct: 644 YAAAVLFRI 652>XP_006721941 Length = 745 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 YAAAVLFQM 9 YAAAVLF++ Sbjct: 644 YAAAVLFRI 652>XP_006721940 Length = 745 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 YAAAVLFQM 9 YAAAVLF++ Sbjct: 644 YAAAVLFRI 652>XP_006721939 Length = 745 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 YAAAVLFQM 9 YAAAVLF++ Sbjct: 644 YAAAVLFRI 652>XP_006721938 Length = 745 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 YAAAVLFQM 9 YAAAVLF++ Sbjct: 644 YAAAVLFRI 652>XP_006721937 Length = 745 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 YAAAVLFQM 9 YAAAVLF++ Sbjct: 644 YAAAVLFRI 652>XP_006721936 Length = 745 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 YAAAVLFQM 9 YAAAVLF++ Sbjct: 644 YAAAVLFRI 652>XP_006721935 Length = 762 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 YAAAVLFQM 9 YAAAVLF++ Sbjct: 661 YAAAVLFRI 669>XP_006721934 Length = 783 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 YAAAVLFQM 9 YAAAVLF++ Sbjct: 682 YAAAVLFRI 690>XP_005257370 Length = 783 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 YAAAVLFQM 9 YAAAVLF++ Sbjct: 682 YAAAVLFRI 690>NP_000229 Length = 1159 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 YAAAVLF 7 Y AAVLF Sbjct: 545 YGAAVLF 551>NP_001191727 Length = 548 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 YAAAVLF 7 Y AAVLF Sbjct: 205 YGAAVLF 211>NP_742053 Length = 888 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 YAAAVLF 7 Y AAVLF Sbjct: 545 YGAAVLF 551>NP_742054 Length = 819 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 YAAAVLF 7 Y AAVLF Sbjct: 205 YGAAVLF 211>NP_001229825 Length = 1603 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 AAVLFQM 9 AAVLF+M Sbjct: 1395 AAVLFEM 1401>NP_001229826 Length = 1503 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 AAVLFQM 9 AAVLF+M Sbjct: 1295 AAVLFEM 1301>NP_055477 Length = 1572 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 AAVLFQM 9 AAVLF+M Sbjct: 1364 AAVLFEM 1370>NP_001129501 Length = 1594 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 AAVLFQM 9 AAVLF+M Sbjct: 1386 AAVLFEM 1392>NP_110406 Length = 994 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 YAAAVLF 7 Y AAVLF Sbjct: 396 YGAAVLF 402>NP_001265848 Length = 958 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 YAAAVLF 7 Y AAVLF Sbjct: 396 YGAAVLF 402>NP_001265849 Length = 835 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 YAAAVLF 7 Y AAVLF Sbjct: 273 YGAAVLF 279>NP_775115 Length = 905 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 YAAAVLF 7 Y AAVLF Sbjct: 396 YGAAVLF 402>XP_006724448 Length = 1490 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 AAVLFQM 9 AAVLF+M Sbjct: 1282 AAVLFEM 1288>XP_006724447 Length = 1516 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 AAVLFQM 9 AAVLF+M Sbjct: 1308 AAVLFEM 1314>XP_005261922 Length = 1525 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 AAVLFQM 9 AAVLF+M Sbjct: 1317 AAVLFEM 1323>XP_005261921 Length = 1581 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 AAVLFQM 9 AAVLF+M Sbjct: 1373 AAVLFEM 1379>XP_005261920 Length = 1594 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 AAVLFQM 9 AAVLF+M Sbjct: 1386 AAVLFEM 1392>XP_005261919 Length = 1603 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 AAVLFQM 9 AAVLF+M Sbjct: 1395 AAVLFEM 1401>XP_005260020 Length = 509 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 YAAAVLFQM 9 Y AA +FQ+ Sbjct: 347 YTAATVFQL 355>XP_006716040 Length = 1137 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 YAAAVLF 7 Y AAVLF Sbjct: 545 YGAAVLF 551>NP_060152 Length = 509 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 YAAAVLFQM 9 Y AA +FQ+ Sbjct: 347 YTAATVFQL 355>NP_001192136 Length = 551 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 YAAAVLFQ 8 YAA VLF+ Sbjct: 326 YAAFVLFR 333>NP_919231 Length = 591 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 YAAAVLFQ 8 YAA VLF+ Sbjct: 366 YAAFVLFR 373>NP_001192135 Length = 489 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 YAAAVLFQ 8 YAA VLF+ Sbjct: 366 YAAFVLFR 373>NP_055099 Length = 729 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 YAAAVLF 7 +AAA+LF Sbjct: 596 FAAAILF 602>NP_001014839 Length = 729 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 YAAAVLF 7 +AAA+LF Sbjct: 596 FAAAILF 602>XP_005261221 Length = 473 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 YAAAVLFQ 8 YAA VLF+ Sbjct: 248 YAAFVLFR 255>NP_001014841 Length = 712 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 YAAAVLF 7 +AAA+LF Sbjct: 579 FAAAILF 585Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.345 0.136 0.374 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 305,257 Number of extensions: 408 Number of successful extensions: 46 Number of sequences better than 10000.0: 46 Number of HSP's gapped: 46 Number of HSP's successfully gapped: 46 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.5 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |