Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000258 16 5631 NP_001035957 16 5631 NP_056312 16 5631 NP_001273416 16 5631 XP_006721991 16 5631 XP_006721990 16 5631 XP_006721989 16 5631 XP_005258041 16 5631 XP_006721988 16 5631 XP_006721987 16 5631 XP_006721986 16 5631 XP_005258040 16 5631 XP_006721985 16 5631 XP_006720531 16 5631 XP_005254344 16 5631 NP_078966 16 7355 NP_005572 16 7355 NP_056362 16 7355 NP_001139447 16 7355 NP_003975 16 7355 NP_001013275 16 7355 XP_006722228 16 7355 XP_006716315 16 7355 NP_001269117 15 9605 NP_001269116 15 9605 NP_001269115 15 9605 NP_006630 15 9605 NP_001129490 15 9605 NP_579875 15 9605 NP_758847 15 9605 NP_001278092 15 9605 NP_000111 15 9605 NP_001231800 15 9605 NP_001334 15 9605 NP_775796 15 9605 NP_001005169 15 9605 NP_001005170 15 9605 XP_006710090 15 9605>NP_000258 Length = 2818 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 WISISLTSA 9 W S++LTS+ Sbjct: 1538 WSSLNLTSS 1546>NP_001035957 Length = 2839 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 WISISLTSA 9 W S++LTS+ Sbjct: 1559 WSSLNLTSS 1567>NP_056312 Length = 555 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 WISISLT 7 WI ISLT Sbjct: 377 WIFISLT 383>NP_001273416 Length = 494 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 WISISLT 7 WI ISLT Sbjct: 316 WIFISLT 322>XP_006721991 Length = 1632 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 WISISLTSA 9 W S++LTS+ Sbjct: 1569 WSSLNLTSS 1577>XP_006721990 Length = 2823 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 WISISLTSA 9 W S++LTS+ Sbjct: 1569 WSSLNLTSS 1577>XP_006721989 Length = 2823 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 WISISLTSA 9 W S++LTS+ Sbjct: 1569 WSSLNLTSS 1577>XP_005258041 Length = 2836 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 WISISLTSA 9 W S++LTS+ Sbjct: 1538 WSSLNLTSS 1546>XP_006721988 Length = 2846 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 WISISLTSA 9 W S++LTS+ Sbjct: 1548 WSSLNLTSS 1556>XP_006721987 Length = 2849 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 WISISLTSA 9 W S++LTS+ Sbjct: 1569 WSSLNLTSS 1577>XP_006721986 Length = 2854 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 WISISLTSA 9 W S++LTS+ Sbjct: 1556 WSSLNLTSS 1564>XP_005258040 Length = 2857 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 WISISLTSA 9 W S++LTS+ Sbjct: 1559 WSSLNLTSS 1567>XP_006721985 Length = 2867 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 WISISLTSA 9 W S++LTS+ Sbjct: 1569 WSSLNLTSS 1577>XP_006720531 Length = 415 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 WISISLT 7 WI ISLT Sbjct: 237 WIFISLT 243>XP_005254344 Length = 556 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 WISISLT 7 WI ISLT Sbjct: 378 WIFISLT 384>NP_078966 Length = 14507 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 WISISLT 7 W+S SLT Sbjct: 1460 WLSTSLT 1466>NP_005572 Length = 628 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 WISISLT 7 W+S SLT Sbjct: 502 WVSSSLT 508>NP_056362 Length = 607 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 WISISLT 7 W+ +SLT Sbjct: 546 WVRVSLT 552>NP_001139447 Length = 641 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 WISISLTSA 9 WIS + TSA Sbjct: 187 WISNTATSA 195>NP_003975 Length = 592 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 WISISLTSA 9 WIS + TSA Sbjct: 138 WISNTATSA 146>NP_001013275 Length = 588 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 WISISLT 7 W+S SLT Sbjct: 502 WVSSSLT 508>XP_006722228 Length = 549 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 WISISLTSA 9 WIS + TSA Sbjct: 94 WISNTATSA 102>XP_006716315 Length = 442 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 WISISLT 7 W S+SLT Sbjct: 412 WSSVSLT 418>NP_001269117 Length = 337 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 WISISLTSA 9 WI + LTS+ Sbjct: 148 WIFVILTSS 156>NP_001269116 Length = 337 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 WISISLTSA 9 WI + LTS+ Sbjct: 148 WIFVILTSS 156>NP_001269115 Length = 337 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 WISISLTSA 9 WI + LTS+ Sbjct: 148 WIFVILTSS 156>NP_006630 Length = 337 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 WISISLTSA 9 WI + LTS+ Sbjct: 148 WIFVILTSS 156>NP_001129490 Length = 455 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 WISISLTS 8 W+ I LTS Sbjct: 2 WLEILLTS 9>NP_579875 Length = 436 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 WISISLTS 8 W+ IS+T+ Sbjct: 366 WVIISMTT 373>NP_758847 Length = 425 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 WISISLTS 8 W+ IS+T+ Sbjct: 355 WVIISMTT 362>NP_001278092 Length = 455 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 WISISLTS 8 W+ I LTS Sbjct: 2 WLEILLTS 9>NP_000111 Length = 455 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 WISISLTS 8 W+ I LTS Sbjct: 2 WLEILLTS 9>NP_001231800 Length = 749 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 WISISLT 7 W++ISL+ Sbjct: 94 WVNISLS 100>NP_001334 Length = 770 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 WISISLT 7 W++ISL+ Sbjct: 94 WVNISLS 100>NP_775796 Length = 333 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 1 WISISLTS 8 W+ + LTS Sbjct: 170 WLQLGLTS 177>NP_001005169 Length = 324 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 WISISLTS 8 W++ISL++ Sbjct: 30 WLAISLSA 37>NP_001005170 Length = 350 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 WISISLTS 8 W++ISL++ Sbjct: 56 WLAISLSA 63>XP_006710090 Length = 255 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 WISISLT 7 WI +SLT Sbjct: 4 WIFLSLT 10Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.316 0.117 0.370 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 351,333 Number of extensions: 357 Number of successful extensions: 38 Number of sequences better than 10000.0: 38 Number of HSP's gapped: 38 Number of HSP's successfully gapped: 38 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.9 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |