Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_060872 18 1135 NP_659206 18 1482 NP_659205 18 1482 NP_006790 18 1482 NP_004680 17 3301 NP_001254483 17 4312 NP_689716 17 4312 NP_000122 17 4312 NP_062562 17 4312 XP_006720026 17 4312 NP_001181 16 5631 NP_777576 16 5631 NP_060733 16 5631 NP_055634 16 5631 NP_071342 16 7355 NP_001094282 16 7355 NP_001005512 16 7355 NP_892018 16 7355 XP_005259608 16 7355 XP_006719430 16 7355 XP_006719428 16 7355 XP_005253933 16 7355 XP_006718293 16 7355 XP_006714288 16 7355 NP_001084 16 7355 NP_001188478 15 9605 NP_004687 15 9605 NP_001188475 15 9605 NP_001165903 15 9605 NP_975010 15 9605 NP_006828 15 9605 NP_005038 15 9605 NP_079416 15 9605 NP_001712 15 9605 NP_001257356 15 9605 XP_006724573 15 9605 XP_005253682 15 9605 XP_006719674 15 9605 XP_005253681 15 9605 XP_005245481 15 9605 XP_005271374 15 9605>NP_060872 Length = 171 Score = 18.5 bits (36), Expect = 1135 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 WIRKLMSSS 9 WI+KL+ SS Sbjct: 162 WIKKLLESS 170>NP_659206 Length = 300 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 WIRKLMSSS 9 WI+KLM+ S Sbjct: 266 WIQKLMAQS 274>NP_659205 Length = 312 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 WIRKLMSSS 9 WI+KLM+ S Sbjct: 278 WIQKLMAQS 286>NP_006790 Length = 314 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 WIRKLMSSS 9 WI+KLM+ S Sbjct: 280 WIQKLMAQS 288>NP_004680 Length = 715 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 IRKLMSSS 9 IRKL+SSS Sbjct: 668 IRKLLSSS 675>NP_001254483 Length = 382 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 WIRKLMSS 8 W++KLM S Sbjct: 362 WLQKLMRS 369>NP_689716 Length = 1052 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 WIRKLMSSS 9 W++KLM S Sbjct: 1042 WLQKLMGRS 1050>NP_000122 Length = 466 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 WIRKLMSS 8 W++KLM S Sbjct: 446 WLQKLMRS 453>NP_062562 Length = 444 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 WIRKLMSS 8 W++KLM S Sbjct: 424 WLQKLMRS 431>XP_006720026 Length = 397 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 WIRKLMSS 8 W++KLM S Sbjct: 377 WLQKLMRS 384>NP_001181 Length = 392 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 WIRKLMS 7 W RKL+S Sbjct: 10 WARKLLS 16>NP_777576 Length = 1749 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 WIRKLMSSS 9 W+ K+MS S Sbjct: 320 WMNKIMSYS 328>NP_060733 Length = 1435 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 WIRKLMSSS 9 W RK+ SSS Sbjct: 131 WKRKVSSSS 139>NP_055634 Length = 708 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 IRKLMSSS 9 +RKL+SSS Sbjct: 318 VRKLISSS 325>NP_071342 Length = 273 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 WIRKLMS 7 W+++LMS Sbjct: 108 WVQELMS 114>NP_001094282 Length = 273 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 WIRKLMS 7 W+++LMS Sbjct: 108 WVQELMS 114>NP_001005512 Length = 309 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 WIRKLMSSS 9 W R L+SSS Sbjct: 300 WRRDLISSS 308>NP_892018 Length = 1059 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 WIRKLMSS 8 WI ++MSS Sbjct: 730 WILEIMSS 737>XP_005259608 Length = 1093 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 WIRKLMSS 8 WI ++MSS Sbjct: 764 WILEIMSS 771>XP_006719430 Length = 2256 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 WIRKLM 6 W++KLM Sbjct: 822 WVQKLM 827>XP_006719428 Length = 2458 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 WIRKLM 6 W++KLM Sbjct: 1024 WVQKLM 1029>XP_005253933 Length = 2458 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 WIRKLM 6 W++KLM Sbjct: 1024 WVQKLM 1029>XP_006718293 Length = 309 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 WIRKLMSSS 9 W R L+SSS Sbjct: 300 WRRDLISSS 308>XP_006714288 Length = 183 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 WIRKLM 6 W+RKL+ Sbjct: 8 WLRKLL 13>NP_001084 Length = 2458 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 WIRKLM 6 W++KLM Sbjct: 1024 WVQKLM 1029>NP_001188478 Length = 319 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 WIRKLMSS 8 WI +MSS Sbjct: 61 WIGSIMSS 68>NP_004687 Length = 487 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 WIRKLMSS 8 WI +MSS Sbjct: 61 WIGSIMSS 68>NP_001188475 Length = 439 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 WIRKLMSS 8 WI +MSS Sbjct: 61 WIGSIMSS 68>NP_001165903 Length = 374 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 WIRKLMS 7 WI KLM+ Sbjct: 366 WIGKLMA 372>NP_975010 Length = 675 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 IRKLMSSS 9 +RKL SSS Sbjct: 246 VRKLKSSS 253>NP_006828 Length = 334 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 WIRKLMSSS 9 W+ L SSS Sbjct: 246 WVNTLSSSS 254>NP_005038 Length = 504 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 WIRKLMSSS 9 W +KLM +S Sbjct: 426 WAQKLMFNS 434>NP_079416 Length = 331 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RKLMSSS 9 +KLMSSS Sbjct: 167 KKLMSSS 173>NP_001712 Length = 675 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 IRKLMSSS 9 +RKL SSS Sbjct: 246 VRKLKSSS 253>NP_001257356 Length = 461 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 WIRKLMSSS 9 W +KLM +S Sbjct: 383 WAQKLMFNS 391>XP_006724573 Length = 674 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 IRKLMSSS 9 +RKL SSS Sbjct: 246 VRKLKSSS 253>XP_005253682 Length = 331 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RKLMSSS 9 +KLMSSS Sbjct: 167 KKLMSSS 173>XP_006719674 Length = 331 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RKLMSSS 9 +KLMSSS Sbjct: 167 KKLMSSS 173>XP_005253681 Length = 331 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RKLMSSS 9 +KLMSSS Sbjct: 167 KKLMSSS 173>XP_005245481 Length = 512 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 WIRKLMSS 8 W RKL+++ Sbjct: 5 WARKLLAA 12>XP_005271374 Length = 487 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 WIRKLMSS 8 WI +MSS Sbjct: 61 WIGSIMSS 68Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.321 0.119 0.394 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 425,293 Number of extensions: 815 Number of successful extensions: 41 Number of sequences better than 10000.0: 41 Number of HSP's gapped: 41 Number of HSP's successfully gapped: 41 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.1 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |