Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005269 17 2528 NP_001001996 17 2528 NP_001001995 17 2528 NP_001001994 17 2528 NP_722576 17 2528 XP_005262424 17 2528 XP_005274547 17 2528 XP_005274546 17 2528 NP_694983 17 3301 NP_001273567 17 3301 XP_006719861 17 3301 XP_006719860 17 3301 XP_006719859 17 3301 XP_006719858 17 3301 NP_001001924 16 5631 NP_001001925 16 5631 NP_002909 16 5631 XP_006722894 16 5631 XP_006722893 16 5631 XP_006722892 16 5631 XP_005273640 16 5631 XP_005273639 16 5631 XP_005273638 16 5631 XP_005273637 16 5631 XP_005273636 16 5631 XP_005273635 16 5631 XP_005273634 16 5631 NP_001036040 16 7355 NP_001123481 16 7355 NP_004990 16 7355 NP_872431 16 7355 XP_005248783 16 7355 XP_005248782 16 7355 XP_005248781 16 7355 XP_005248779 16 7355 XP_005248778 16 7355 XP_005248777 16 7355 XP_005248776 16 7355 XP_006713677 16 7355 XP_006712069 16 7355 XP_006712068 16 7355 XP_005262670 16 7355 NP_001230178 15 9605 NP_001258820 15 9605 NP_001258819 15 9605 NP_001230176 15 9605 NP_001025046 15 9605 NP_001034565 15 9605 NP_001070818 15 9605 NP_001230177 15 9605 XP_005248559 15 9605 XP_006714677 15 9605>NP_005269 Length = 265 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 YTTSAIK 8 YTTSA+K Sbjct: 111 YTTSAVK 117>NP_001001996 Length = 305 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 YTTSAIK 8 YTTSA+K Sbjct: 151 YTTSAVK 157>NP_001001995 Length = 328 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 YTTSAIK 8 YTTSA+K Sbjct: 151 YTTSAVK 157>NP_001001994 Length = 246 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 YTTSAIK 8 YTTSA+K Sbjct: 92 YTTSAVK 98>NP_722576 Length = 3080 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VYTTSAIKS 9 V TTSAIKS Sbjct: 385 VSTTSAIKS 393>XP_005262424 Length = 2875 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VYTTSAIKS 9 V TTSAIKS Sbjct: 180 VSTTSAIKS 188>XP_005274547 Length = 269 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 YTTSAIK 8 YTTSA+K Sbjct: 92 YTTSAVK 98>XP_005274546 Length = 288 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 YTTSAIK 8 YTTSA+K Sbjct: 111 YTTSAVK 117>NP_694983 Length = 354 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VYTTSAIKS 9 +YTTSA K+ Sbjct: 116 IYTTSASKT 124>NP_001273567 Length = 292 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VYTTSAIKS 9 +YTTSA K+ Sbjct: 53 IYTTSASKT 61>XP_006719861 Length = 286 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VYTTSAIKS 9 +YTTSA K+ Sbjct: 37 IYTTSASKT 45>XP_006719860 Length = 355 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VYTTSAIKS 9 +YTTSA K+ Sbjct: 116 IYTTSASKT 124>XP_006719859 Length = 364 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VYTTSAIKS 9 +YTTSA K+ Sbjct: 116 IYTTSASKT 124>XP_006719858 Length = 365 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VYTTSAIKS 9 +YTTSA K+ Sbjct: 116 IYTTSASKT 124>NP_001001924 Length = 1270 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 TTSAIKS 9 TTSA+KS Sbjct: 604 TTSAVKS 610>NP_001001925 Length = 1216 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 TTSAIKS 9 TTSA+KS Sbjct: 604 TTSAVKS 610>NP_002909 Length = 979 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 YTTSAIKS 9 YT SAI+S Sbjct: 305 YTASAIRS 312>XP_006722894 Length = 870 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 YTTSAIKS 9 YT SAI+S Sbjct: 196 YTASAIRS 203>XP_006722893 Length = 870 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 YTTSAIKS 9 YT SAI+S Sbjct: 196 YTASAIRS 203>XP_006722892 Length = 979 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 YTTSAIKS 9 YT SAI+S Sbjct: 305 YTASAIRS 312>XP_005273640 Length = 969 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 TTSAIKS 9 TTSA+KS Sbjct: 604 TTSAVKS 610>XP_005273639 Length = 1216 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 TTSAIKS 9 TTSA+KS Sbjct: 604 TTSAVKS 610>XP_005273638 Length = 1228 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 TTSAIKS 9 TTSA+KS Sbjct: 604 TTSAVKS 610>XP_005273637 Length = 1228 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 TTSAIKS 9 TTSA+KS Sbjct: 604 TTSAVKS 610>XP_005273636 Length = 1270 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 TTSAIKS 9 TTSA+KS Sbjct: 604 TTSAVKS 610>XP_005273635 Length = 1282 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 TTSAIKS 9 TTSA+KS Sbjct: 604 TTSAVKS 610>XP_005273634 Length = 1282 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 TTSAIKS 9 TTSA+KS Sbjct: 604 TTSAVKS 610>NP_001036040 Length = 717 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 VYTTSA 6 VYTTSA Sbjct: 35 VYTTSA 40>NP_001123481 Length = 908 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 YTTSAIKS 9 YT S+IKS Sbjct: 182 YTMSSIKS 189>NP_004990 Length = 1285 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VYTTSAIKS 9 +Y++ AIKS Sbjct: 106 IYSSEAIKS 114>NP_872431 Length = 908 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 YTTSAIKS 9 YT S+IKS Sbjct: 182 YTMSSIKS 189>XP_005248783 Length = 1253 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VYTTSAIKS 9 +Y++ AIKS Sbjct: 106 IYSSEAIKS 114>XP_005248782 Length = 1262 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VYTTSAIKS 9 +Y++ AIKS Sbjct: 106 IYSSEAIKS 114>XP_005248781 Length = 1272 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VYTTSAIKS 9 +Y++ AIKS Sbjct: 106 IYSSEAIKS 114>XP_005248779 Length = 1276 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VYTTSAIKS 9 +Y++ AIKS Sbjct: 106 IYSSEAIKS 114>XP_005248778 Length = 1281 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VYTTSAIKS 9 +Y++ AIKS Sbjct: 106 IYSSEAIKS 114>XP_005248777 Length = 1285 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VYTTSAIKS 9 +Y++ AIKS Sbjct: 106 IYSSEAIKS 114>XP_005248776 Length = 1294 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VYTTSAIKS 9 +Y++ AIKS Sbjct: 106 IYSSEAIKS 114>XP_006713677 Length = 717 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 VYTTSA 6 VYTTSA Sbjct: 35 VYTTSA 40>XP_006712069 Length = 908 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 YTTSAIKS 9 YT S+IKS Sbjct: 182 YTMSSIKS 189>XP_006712068 Length = 908 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 YTTSAIKS 9 YT S+IKS Sbjct: 182 YTMSSIKS 189>XP_005262670 Length = 908 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 YTTSAIKS 9 YT S+IKS Sbjct: 182 YTMSSIKS 189>NP_001230178 Length = 544 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VYTTSAIKS 9 + TTSA+K+ Sbjct: 261 IKTTSAVKN 269>NP_001258820 Length = 94 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VYTTSAIKS 9 +YTT +KS Sbjct: 1 MYTTEMLKS 9>NP_001258819 Length = 124 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VYTTSAIKS 9 +YTT +KS Sbjct: 1 MYTTEMLKS 9>NP_001230176 Length = 491 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VYTTSAIKS 9 + TTSA+K+ Sbjct: 208 IKTTSAVKN 216>NP_001025046 Length = 257 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VYTTSAIKS 9 +YTT +KS Sbjct: 134 MYTTEMLKS 142>NP_001034565 Length = 390 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VYTTSAIKS 9 + TTSA+K+ Sbjct: 107 IKTTSAVKN 115>NP_001070818 Length = 569 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VYTTSAIKS 9 + TTSA+K+ Sbjct: 286 IKTTSAVKN 294>NP_001230177 Length = 544 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VYTTSAIKS 9 + TTSA+K+ Sbjct: 261 IKTTSAVKN 269>XP_005248559 Length = 227 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VYTTSAIKS 9 +YTT +KS Sbjct: 134 MYTTEMLKS 142>XP_006714677 Length = 204 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VYTTSAIKS 9 +YTT +KS Sbjct: 134 MYTTEMLKS 142Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.303 0.109 0.259 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 338,511 Number of extensions: 421 Number of successful extensions: 52 Number of sequences better than 10000.0: 52 Number of HSP's gapped: 52 Number of HSP's successfully gapped: 52 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.4 bits) S2: 28 (15.4 bits)
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |