Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000224 20 299 NP_000360 20 299 XP_005268094 20 299 XP_005264366 20 299 XP_006712078 20 299 NP_852111 19 869 NP_000136 19 869 NP_001786 16 5631 NP_001001967 16 5631 NP_065866 16 7355 NP_116586 16 7355 NP_006197 16 7355 NP_001005493 16 7355 NP_001777 16 7355 NP_078858 16 7355 NP_001278232 16 7355 NP_001278214 16 7355 NP_057613 16 7355 NP_071407 16 7355 NP_001275918 16 7355 NP_001159451 16 7355 NP_006086 16 7355 NP_001098999 16 7355 NP_057425 16 7355 NP_065831 16 7355 NP_005062 16 7355 XP_006722907 16 7355 XP_006722906 16 7355 XP_006722905 16 7355 XP_006719897 16 7355 XP_006719896 16 7355 XP_006719895 16 7355 XP_005266476 16 7355 XP_006718146 16 7355 XP_006718145 16 7355 XP_005270360 16 7355 XP_006718005 16 7355 XP_006718004 16 7355 XP_006718003 16 7355 XP_006717953 16 7355 XP_006717952 16 7355 XP_006717951 16 7355 XP_006717950 16 7355 XP_006717949 16 7355 XP_006717948 16 7355 XP_006714104 16 7355 XP_005265800 16 7355 XP_006714103 16 7355 XP_006714102 16 7355 XP_006714052 16 7355 XP_005248100 16 7355 XP_005275746 16 7355 XP_003403671 16 7355 XP_006710003 16 7355 NP_001005197 16 7355 NP_001005213 16 7355 NP_003688 16 7355 NP_001013376 16 7355 NP_078966 15 9605 NP_003348 15 9605 NP_006574 15 9605 NP_001004477 15 9605>NP_000224 Length = 699 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 VYTLTVVTL 9 VYTLTV+TL Sbjct: 454 VYTLTVITL 462>NP_000360 Length = 764 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 VYTLTVVTL 9 VYTLTV+TL Sbjct: 509 VYTLTVITL 517>XP_005268094 Length = 764 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 VYTLTVVTL 9 VYTLTV+TL Sbjct: 509 VYTLTVITL 517>XP_005264366 Length = 380 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 VYTLTVVTL 9 VYTLTV+TL Sbjct: 135 VYTLTVITL 143>XP_006712078 Length = 389 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 VYTLTVVTL 9 VYTLTV+TL Sbjct: 144 VYTLTVITL 152>NP_852111 Length = 669 Score = 18.9 bits (37), Expect = 869 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 VYTLTVVTL 9 VYTLT +TL Sbjct: 431 VYTLTAITL 439>NP_000136 Length = 695 Score = 18.9 bits (37), Expect = 869 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 VYTLTVVTL 9 VYTLT +TL Sbjct: 457 VYTLTAITL 465>NP_001786 Length = 784 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VYTLTVVTL 9 + T+TV+TL Sbjct: 608 ILTITVITL 616>NP_001001967 Length = 314 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VYTLTVV 7 VYT+TVV Sbjct: 36 VYTVTVV 42>NP_065866 Length = 896 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 YTLTVV 7 YTLTVV Sbjct: 429 YTLTVV 434>NP_116586 Length = 1040 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 YTLTVV 7 YTLTVV Sbjct: 429 YTLTVV 434>NP_006197 Length = 1089 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 VYTLTV 6 VYTLTV Sbjct: 272 VYTLTV 277>NP_001005493 Length = 314 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 YTLTVVTL 9 +TL VVTL Sbjct: 198 FTLAVVTL 205>NP_001777 Length = 297 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 VYTLTVVTL 9 VYT VVTL Sbjct: 159 VYTHEVVTL 167>NP_078858 Length = 4981 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 YTLTVV 7 YTLTVV Sbjct: 2120 YTLTVV 2125>NP_001278232 Length = 4983 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 YTLTVV 7 YTLTVV Sbjct: 2120 YTLTVV 2125>NP_001278214 Length = 4982 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 YTLTVV 7 YTLTVV Sbjct: 2120 YTLTVV 2125>NP_057613 Length = 1188 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VYTLTVVTL 9 VYT VVT+ Sbjct: 1004 VYTYVVVTV 1012>NP_071407 Length = 3354 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 YTLTVV 7 YTLTVV Sbjct: 1385 YTLTVV 1390>NP_001275918 Length = 2286 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 VYTLTVVT 8 VY+LT+V+ Sbjct: 1854 VYSLTIVS 1861>NP_001159451 Length = 1994 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 VYTLTVVT 8 VY+LT+V+ Sbjct: 1562 VYSLTIVS 1569>NP_006086 Length = 1164 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VYTLTVVTL 9 VYT V+T+ Sbjct: 984 VYTFVVITV 992>NP_001098999 Length = 1149 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VYTLTVVTL 9 VYT V+T+ Sbjct: 969 VYTFVVITV 977>NP_057425 Length = 2302 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 VYTLTVVT 8 VY+LT+V+ Sbjct: 1870 VYSLTIVS 1877>NP_065831 Length = 1392 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VYTLTVVT 8 +YTLTV T Sbjct: 1331 LYTLTVST 1338>NP_005062 Length = 564 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VYTLTVV 7 +YTLTV+ Sbjct: 341 MYTLTVI 347>XP_006722907 Length = 564 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VYTLTVV 7 +YTLTV+ Sbjct: 341 MYTLTVI 347>XP_006722906 Length = 564 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VYTLTVV 7 +YTLTV+ Sbjct: 341 MYTLTVI 347>XP_006722905 Length = 564 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VYTLTVV 7 +YTLTV+ Sbjct: 341 MYTLTVI 347>XP_006719897 Length = 1148 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VYTLTVVTL 9 VYT VVT+ Sbjct: 964 VYTYVVVTV 972>XP_006719896 Length = 1005 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VYTLTVVTL 9 VYT VVT+ Sbjct: 821 VYTYVVVTV 829>XP_006719895 Length = 1082 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VYTLTVVTL 9 VYT VVT+ Sbjct: 898 VYTYVVVTV 906>XP_005266476 Length = 1148 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VYTLTVVTL 9 VYT VVT+ Sbjct: 964 VYTYVVVTV 972>XP_006718146 Length = 297 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 VYTLTVVTL 9 VYT VVTL Sbjct: 159 VYTHEVVTL 167>XP_006718145 Length = 297 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 VYTLTVVTL 9 VYT VVTL Sbjct: 159 VYTHEVVTL 167>XP_005270360 Length = 297 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 VYTLTVVTL 9 VYT VVTL Sbjct: 159 VYTHEVVTL 167>XP_006718005 Length = 3397 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 YTLTVV 7 YTLTVV Sbjct: 1428 YTLTVV 1433>XP_006718004 Length = 3399 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 YTLTVV 7 YTLTVV Sbjct: 1430 YTLTVV 1435>XP_006718003 Length = 3419 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 YTLTVV 7 YTLTVV Sbjct: 1450 YTLTVV 1455>XP_006717953 Length = 2008 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 VYTLTVVT 8 VY+LT+V+ Sbjct: 1576 VYSLTIVS 1583>XP_006717952 Length = 2300 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 VYTLTVVT 8 VY+LT+V+ Sbjct: 1868 VYSLTIVS 1875>XP_006717951 Length = 2315 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 VYTLTVVT 8 VY+LT+V+ Sbjct: 1883 VYSLTIVS 1890>XP_006717950 Length = 2316 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 VYTLTVVT 8 VY+LT+V+ Sbjct: 1884 VYSLTIVS 1891>XP_006717949 Length = 2316 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 VYTLTVVT 8 VY+LT+V+ Sbjct: 1884 VYSLTIVS 1891>XP_006717948 Length = 2316 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 VYTLTVVT 8 VY+LT+V+ Sbjct: 1884 VYSLTIVS 1891>XP_006714104 Length = 832 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 VYTLTV 6 VYTLTV Sbjct: 297 VYTLTV 302>XP_005265800 Length = 1089 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 VYTLTV 6 VYTLTV Sbjct: 272 VYTLTV 277>XP_006714103 Length = 1111 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 VYTLTV 6 VYTLTV Sbjct: 294 VYTLTV 299>XP_006714102 Length = 1114 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 VYTLTV 6 VYTLTV Sbjct: 297 VYTLTV 302>XP_006714052 Length = 1000 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VYTLTVVTL 9 VYT V+T+ Sbjct: 820 VYTFVVITV 828>XP_005248100 Length = 1164 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VYTLTVVTL 9 VYT V+T+ Sbjct: 984 VYTFVVITV 992>XP_005275746 Length = 3352 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 YTLTVV 7 YTLTVV Sbjct: 1383 YTLTVV 1388>XP_003403671 Length = 3354 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 YTLTVV 7 YTLTVV Sbjct: 1385 YTLTVV 1390>XP_006710003 Length = 3374 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 YTLTVV 7 YTLTVV Sbjct: 1405 YTLTVV 1410>NP_001005197 Length = 314 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VYTLTVV 7 +YT+TVV Sbjct: 34 IYTVTVV 40>NP_001005213 Length = 305 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VYTLTVV 7 VY+LTVV Sbjct: 33 VYSLTVV 39>NP_003688 Length = 314 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VYTLTVV 7 +YTLTV+ Sbjct: 34 IYTLTVL 40>NP_001013376 Length = 305 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VYTLTVV 7 VY+LTVV Sbjct: 33 VYSLTVV 39>NP_078966 Length = 14507 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 YTLTVVT 8 YTLTV T Sbjct: 147 YTLTVET 153>NP_003348 Length = 91 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 TLTVVTL 9 TLT+VTL Sbjct: 6 TLTLVTL 12>NP_006574 Length = 337 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 YTLTVVTL 9 YT+TV+ + Sbjct: 189 YTMTVIAI 196>NP_001004477 Length = 326 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 YTLTVV 7 YTLT+V Sbjct: 89 YTLTIV 94Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.330 0.138 0.357 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 322,323 Number of extensions: 495 Number of successful extensions: 62 Number of sequences better than 10000.0: 62 Number of HSP's gapped: 62 Number of HSP's successfully gapped: 62 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.2 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |