Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001243398 21 229 NP_036462 21 229 NP_001243397 21 229 XP_005269721 21 229 NP_001092882 20 509 NP_006757 20 509 NP_001092883 20 509 XP_005273706 20 509 NP_149112 17 2528 XP_005254041 17 2528 XP_005254039 17 2528 XP_005254038 17 2528 XP_005254037 17 2528 NP_056054 17 3301 NP_001273646 17 3301 NP_001273644 17 3301 XP_005251906 17 3301 XP_005251905 17 3301 XP_005251904 17 3301 NP_006764 17 3301 NP_543150 16 5631 NP_110379 16 5631 NP_001008897 16 5631 XP_005262817 16 5631 XP_005262816 16 5631 NP_009126 16 7355 XP_005258249 16 7355 XP_006722441 16 7355 XP_006722440 16 7355 XP_005258245 16 7355 XP_006722439 16 7355 NP_795363 16 7355 NP_001182728 15 9605 NP_001182727 15 9605 NP_000518 15 9605 NP_001182732 15 9605 NP_001182729 15 9605 NP_065941 15 9605 NP_005392 15 9605 NP_001107578 15 9605 NP_001036065 15 9605 NP_001245271 15 9605 NP_001245269 15 9605 NP_689582 15 9605 NP_001245270 15 9605 NP_001245272 15 9605 NP_115604 15 9605 NP_055309 15 9605 NP_009112 15 9605 NP_008827 15 9605 XP_006723056 15 9605 XP_006721103 15 9605 XP_005255314 15 9605 XP_006721102 15 9605 XP_005255313 15 9605 XP_005255312 15 9605 XP_006721101 15 9605 XP_005255311 15 9605 XP_005255310 15 9605 XP_005269821 15 9605 XP_005247739 15 9605 XP_006713779 15 9605 XP_005270500 15 9605 XP_005270499 15 9605 XP_005270498 15 9605 XP_005270497 15 9605 NP_001121687 15 9605>NP_001243398 Length = 1781 Score = 20.8 bits (42), Expect = 229 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 YNVNSVNM 9 YNVNSVNM Sbjct: 1685 YNVNSVNM 1692>NP_036462 Length = 2073 Score = 20.8 bits (42), Expect = 229 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 YNVNSVNM 9 YNVNSVNM Sbjct: 1977 YNVNSVNM 1984>NP_001243397 Length = 1890 Score = 20.8 bits (42), Expect = 229 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 YNVNSVNM 9 YNVNSVNM Sbjct: 1794 YNVNSVNM 1801>XP_005269721 Length = 2073 Score = 20.8 bits (42), Expect = 229 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 YNVNSVNM 9 YNVNSVNM Sbjct: 1977 YNVNSVNM 1984>NP_001092882 Length = 2004 Score = 19.6 bits (39), Expect = 509 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 YNVNSVNM 9 YNVNS+NM Sbjct: 1909 YNVNSMNM 1916>NP_006757 Length = 2004 Score = 19.6 bits (39), Expect = 509 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 YNVNSVNM 9 YNVNS+NM Sbjct: 1909 YNVNSMNM 1916>NP_001092883 Length = 2004 Score = 19.6 bits (39), Expect = 509 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 YNVNSVNM 9 YNVNS+NM Sbjct: 1909 YNVNSMNM 1916>XP_005273706 Length = 1997 Score = 19.6 bits (39), Expect = 509 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 YNVNSVNM 9 YNVNS+NM Sbjct: 1902 YNVNSMNM 1909>NP_149112 Length = 590 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VYNVNSVNM 9 VY VN+VN+ Sbjct: 268 VYTVNNVNV 276>XP_005254041 Length = 503 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VYNVNSVNM 9 VY VN+VN+ Sbjct: 180 VYTVNNVNV 188>XP_005254039 Length = 589 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VYNVNSVNM 9 VY VN+VN+ Sbjct: 268 VYTVNNVNV 276>XP_005254038 Length = 590 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VYNVNSVNM 9 VY VN+VN+ Sbjct: 268 VYTVNNVNV 276>XP_005254037 Length = 591 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VYNVNSVNM 9 VY VN+VN+ Sbjct: 268 VYTVNNVNV 276>NP_056054 Length = 1186 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VYNVNSVN 8 VY+ NSVN Sbjct: 185 VYSANSVN 192>NP_001273646 Length = 1238 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VYNVNSVN 8 VY+ NSVN Sbjct: 237 VYSANSVN 244>NP_001273644 Length = 1278 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VYNVNSVN 8 VY+ NSVN Sbjct: 237 VYSANSVN 244>XP_005251906 Length = 1108 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VYNVNSVN 8 VY+ NSVN Sbjct: 67 VYSANSVN 74>XP_005251905 Length = 1226 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VYNVNSVN 8 VY+ NSVN Sbjct: 185 VYSANSVN 192>XP_005251904 Length = 1226 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VYNVNSVN 8 VY+ NSVN Sbjct: 185 VYSANSVN 192>NP_006764 Length = 670 Score = 16.9 bits (32), Expect = 3301 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 VYNVNSVNM 9 ++NVN++N+ Sbjct: 598 IFNVNNLNL 606>NP_543150 Length = 329 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 YNVNSVNM 9 YNVN+V + Sbjct: 94 YNVNAVTL 101>NP_110379 Length = 556 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 YNVNSVNM 9 Y VNSVN+ Sbjct: 190 YPVNSVNI 197>NP_001008897 Length = 401 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 YNVNSVNM 9 Y VNSVN+ Sbjct: 35 YPVNSVNI 42>XP_005262817 Length = 305 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 YNVNSVNM 9 YNVN+V + Sbjct: 70 YNVNAVTL 77>XP_005262816 Length = 329 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 YNVNSVNM 9 YNVN+V + Sbjct: 94 YNVNAVTL 101>NP_009126 Length = 740 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VYNVNSVNM 9 VYN S+N+ Sbjct: 182 VYNNQSINL 190>XP_005258249 Length = 401 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VYNVNSVNM 9 VYN S+N+ Sbjct: 182 VYNNQSINL 190>XP_006722441 Length = 430 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VYNVNSVNM 9 VYN S+N+ Sbjct: 182 VYNNQSINL 190>XP_006722440 Length = 672 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VYNVNSVNM 9 VYN S+N+ Sbjct: 114 VYNNQSINL 122>XP_005258245 Length = 672 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VYNVNSVNM 9 VYN S+N+ Sbjct: 114 VYNNQSINL 122>XP_006722439 Length = 672 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VYNVNSVNM 9 VYN S+N+ Sbjct: 114 VYNNQSINL 122>NP_795363 Length = 323 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 VYNVNSV 7 VYN NSV Sbjct: 87 VYNQNSV 93>NP_001182728 Length = 819 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 NVNSVN 8 N+NS+N Sbjct: 776 NINSIN 781>NP_001182727 Length = 858 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 NVNSVN 8 N+NS+N Sbjct: 817 NINSIN 822>NP_000518 Length = 860 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 NVNSVN 8 N+NS+N Sbjct: 817 NINSIN 822>NP_001182732 Length = 682 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 NVNSVN 8 N+NS+N Sbjct: 639 NINSIN 644>NP_001182729 Length = 692 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 NVNSVN 8 N+NS+N Sbjct: 649 NINSIN 654>NP_065941 Length = 905 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 YNVNSV 7 YN+NSV Sbjct: 97 YNLNSV 102>NP_005392 Length = 1187 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 VYNVNSVN 8 V++VNS+N Sbjct: 391 VHSVNSLN 398>NP_001107578 Length = 653 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VYNVNSVN 8 VY++NS N Sbjct: 144 VYSLNSFN 151>NP_001036065 Length = 821 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VYNVNSVNM 9 VY++N+V M Sbjct: 545 VYSINNVLM 553>NP_001245271 Length = 617 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VYNVNSVN 8 VY++NS N Sbjct: 108 VYSLNSFN 115>NP_001245269 Length = 652 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VYNVNSVN 8 VY++NS N Sbjct: 144 VYSLNSFN 151>NP_689582 Length = 605 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VYNVNSVN 8 VY++NS N Sbjct: 96 VYSLNSFN 103>NP_001245270 Length = 620 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VYNVNSVN 8 VY++NS N Sbjct: 112 VYSLNSFN 119>NP_001245272 Length = 585 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VYNVNSVN 8 VY++NS N Sbjct: 76 VYSLNSFN 83>NP_115604 Length = 515 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VYNVNSVNM 9 V+N +VNM Sbjct: 400 VWNTENVNM 408>NP_055309 Length = 1962 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 YNVNSVNM 9 YN +VNM Sbjct: 1014 YNYKNVNM 1021>NP_009112 Length = 833 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VYNVNSVNM 9 VY++N+V M Sbjct: 545 VYSINNVLM 553>NP_008827 Length = 230 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 VYNVNS 6 +YNVNS Sbjct: 54 LYNVNS 59>XP_006723056 Length = 801 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VYNVNSVNM 9 VY++N+V M Sbjct: 545 VYSINNVLM 553>XP_006721103 Length = 1597 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 YNVNSVNM 9 YN +VNM Sbjct: 982 YNYKNVNM 989>XP_005255314 Length = 1709 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 YNVNSVNM 9 YN +VNM Sbjct: 761 YNYKNVNM 768>XP_006721102 Length = 1820 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 YNVNSVNM 9 YN +VNM Sbjct: 872 YNYKNVNM 879>XP_005255313 Length = 1822 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 YNVNSVNM 9 YN +VNM Sbjct: 982 YNYKNVNM 989>XP_005255312 Length = 1871 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 YNVNSVNM 9 YN +VNM Sbjct: 982 YNYKNVNM 989>XP_006721101 Length = 1907 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 YNVNSVNM 9 YN +VNM Sbjct: 982 YNYKNVNM 989>XP_005255311 Length = 1913 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 YNVNSVNM 9 YN +VNM Sbjct: 1014 YNYKNVNM 1021>XP_005255310 Length = 1919 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 YNVNSVNM 9 YN +VNM Sbjct: 982 YNYKNVNM 989>XP_005269821 Length = 398 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 YNVNSVNM 9 +N N++NM Sbjct: 254 FNTNNMNM 261>XP_005247739 Length = 880 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 YNVNSV 7 YN+NSV Sbjct: 97 YNLNSV 102>XP_006713779 Length = 904 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 YNVNSV 7 YN+NSV Sbjct: 96 YNLNSV 101>XP_005270500 Length = 573 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VYNVNSVN 8 VY++NS N Sbjct: 64 VYSLNSFN 71>XP_005270499 Length = 574 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VYNVNSVN 8 VY++NS N Sbjct: 144 VYSLNSFN 151>XP_005270498 Length = 605 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VYNVNSVN 8 VY++NS N Sbjct: 96 VYSLNSFN 103>XP_005270497 Length = 621 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VYNVNSVN 8 VY++NS N Sbjct: 112 VYSLNSFN 119>NP_001121687 Length = 423 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 YNVNSVNM 9 +N N++NM Sbjct: 279 FNTNNMNM 286Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.313 0.122 0.326 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 441,078 Number of extensions: 898 Number of successful extensions: 67 Number of sequences better than 10000.0: 67 Number of HSP's gapped: 67 Number of HSP's successfully gapped: 67 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.7 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |