Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_004963 20 299 XP_005251512 20 299 NP_004275 18 1482 NP_001243265 18 1482 NP_078844 18 1482 NP_001243267 18 1482 XP_006711702 18 1482 XP_006711701 18 1482 XP_006711700 18 1482 XP_006711699 18 1482 NP_001186084 17 3301 NP_001186085 17 3301 NP_001186087 17 3301 NP_001186086 17 3301 NP_008998 17 3301 NP_001264880 17 3301 NP_001264876 17 3301 NP_001264878 17 3301 NP_001099022 17 3301 NP_001099021 17 3301 NP_001099020 17 3301 NP_001099019 17 3301 NP_001264881 17 3301 NP_001264877 17 3301 NP_001264875 17 3301 NP_060770 17 3301 NP_001264874 17 3301 NP_006059 16 5631 XP_005262694 16 5631 XP_005262693 16 5631 XP_005245660 16 7355 NP_001073895 16 7355 NP_005493 15 9605 NP_775828 15 9605 NP_033720 15 9605 NP_958934 15 9605 NP_001149 15 9605 XP_005266711 15 9605 XP_005266710 15 9605 XP_005266709 15 9605 XP_005266708 15 9605 XP_005266707 15 9605 XP_005251837 15 9605 XP_005251835 15 9605 XP_006717058 15 9605 XP_005251833 15 9605 XP_005251831 15 9605 XP_005251830 15 9605 NP_005536 15 9605>NP_004963 Length = 1132 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VYHNMSALM 9 VYHNM ALM Sbjct: 80 VYHNMFALM 88>XP_005251512 Length = 1132 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VYHNMSALM 9 VYHNM ALM Sbjct: 80 VYHNMFALM 88>NP_004275 Length = 897 Score = 18.1 bits (35), Expect = 1482 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VYHNMSAL 8 +YH MSAL Sbjct: 278 IYHGMSAL 285>NP_001243265 Length = 797 Score = 18.1 bits (35), Expect = 1482 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VYHNMSAL 8 +YH MSAL Sbjct: 178 IYHGMSAL 185>NP_078844 Length = 784 Score = 18.1 bits (35), Expect = 1482 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VYHNMSAL 8 +YH MSAL Sbjct: 165 IYHGMSAL 172>NP_001243267 Length = 693 Score = 18.1 bits (35), Expect = 1482 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VYHNMSAL 8 +YH MSAL Sbjct: 74 IYHGMSAL 81>XP_006711702 Length = 784 Score = 18.1 bits (35), Expect = 1482 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VYHNMSAL 8 +YH MSAL Sbjct: 165 IYHGMSAL 172>XP_006711701 Length = 792 Score = 18.1 bits (35), Expect = 1482 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VYHNMSAL 8 +YH MSAL Sbjct: 278 IYHGMSAL 285>XP_006711700 Length = 803 Score = 18.1 bits (35), Expect = 1482 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VYHNMSAL 8 +YH MSAL Sbjct: 278 IYHGMSAL 285>XP_006711699 Length = 825 Score = 18.1 bits (35), Expect = 1482 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VYHNMSAL 8 +YH MSAL Sbjct: 206 IYHGMSAL 213>NP_001186084 Length = 581 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VYHNMSA 7 +YHN+SA Sbjct: 211 LYHNLSA 217>NP_001186085 Length = 472 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VYHNMSA 7 +YHN+SA Sbjct: 72 LYHNLSA 78>NP_001186087 Length = 442 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VYHNMSA 7 +YHN+SA Sbjct: 72 LYHNLSA 78>NP_001186086 Length = 501 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VYHNMSA 7 +YHN+SA Sbjct: 131 LYHNLSA 137>NP_008998 Length = 611 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VYHNMSA 7 +YHN+SA Sbjct: 211 LYHNLSA 217>NP_001264880 Length = 516 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VYHNMSAL 8 V+HNMS L Sbjct: 157 VFHNMSHL 164>NP_001264876 Length = 516 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VYHNMSAL 8 V+HNMS L Sbjct: 157 VFHNMSHL 164>NP_001264878 Length = 516 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VYHNMSAL 8 V+HNMS L Sbjct: 157 VFHNMSHL 164>NP_001099022 Length = 516 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VYHNMSAL 8 V+HNMS L Sbjct: 157 VFHNMSHL 164>NP_001099021 Length = 516 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VYHNMSAL 8 V+HNMS L Sbjct: 157 VFHNMSHL 164>NP_001099020 Length = 516 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VYHNMSAL 8 V+HNMS L Sbjct: 157 VFHNMSHL 164>NP_001099019 Length = 516 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VYHNMSAL 8 V+HNMS L Sbjct: 157 VFHNMSHL 164>NP_001264881 Length = 516 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VYHNMSAL 8 V+HNMS L Sbjct: 157 VFHNMSHL 164>NP_001264877 Length = 516 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VYHNMSAL 8 V+HNMS L Sbjct: 157 VFHNMSHL 164>NP_001264875 Length = 516 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VYHNMSAL 8 V+HNMS L Sbjct: 157 VFHNMSHL 164>NP_060770 Length = 516 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VYHNMSAL 8 V+HNMS L Sbjct: 157 VFHNMSHL 164>NP_001264874 Length = 516 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VYHNMSAL 8 V+HNMS L Sbjct: 157 VFHNMSHL 164>NP_006059 Length = 796 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 YHNMSALM 9 YH + ALM Sbjct: 748 YHKLKALM 755>XP_005262694 Length = 796 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 YHNMSALM 9 YH + ALM Sbjct: 748 YHKLKALM 755>XP_005262693 Length = 796 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 YHNMSALM 9 YH + ALM Sbjct: 748 YHKLKALM 755>XP_005245660 Length = 1158 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 VYHNMSAL 8 ++HNM+ L Sbjct: 242 IFHNMAIL 249>NP_001073895 Length = 1158 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 VYHNMSAL 8 ++HNM+ L Sbjct: 242 IFHNMAIL 249>NP_005493 Length = 2261 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 VYHNMS 6 +YHN+S Sbjct: 158 LYHNLS 163>NP_775828 Length = 203 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 VYHNMSAL 8 V HNMS + Sbjct: 186 VLHNMSCI 193>NP_033720 Length = 756 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 VYHNMSAL 8 +YHN+S + Sbjct: 223 LYHNISGV 230>NP_958934 Length = 428 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 HNMSAL 8 HN+SAL Sbjct: 119 HNLSAL 124>NP_001149 Length = 729 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 VYHNMSAL 8 +YHN+S + Sbjct: 223 LYHNISGV 230>XP_005266711 Length = 203 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 VYHNMSAL 8 V HNMS + Sbjct: 186 VLHNMSCI 193>XP_005266710 Length = 203 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 VYHNMSAL 8 V HNMS + Sbjct: 186 VLHNMSCI 193>XP_005266709 Length = 203 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 VYHNMSAL 8 V HNMS + Sbjct: 186 VLHNMSCI 193>XP_005266708 Length = 203 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 VYHNMSAL 8 V HNMS + Sbjct: 186 VLHNMSCI 193>XP_005266707 Length = 203 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 VYHNMSAL 8 V HNMS + Sbjct: 186 VLHNMSCI 193>XP_005251837 Length = 1659 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 VYHNMS 6 +YHN+S Sbjct: 158 LYHNLS 163>XP_005251835 Length = 2074 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 VYHNMS 6 +YHN+S Sbjct: 158 LYHNLS 163>XP_006717058 Length = 2100 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 VYHNMS 6 +YHN+S Sbjct: 158 LYHNLS 163>XP_005251833 Length = 2203 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 VYHNMS 6 +YHN+S Sbjct: 98 LYHNLS 103>XP_005251831 Length = 2263 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 VYHNMS 6 +YHN+S Sbjct: 158 LYHNLS 163>XP_005251830 Length = 2263 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 VYHNMS 6 +YHN+S Sbjct: 158 LYHNLS 163>NP_005536 Length = 428 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 HNMSAL 8 HN+SAL Sbjct: 119 HNLSAL 124Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.331 0.126 0.370 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 426,453 Number of extensions: 331 Number of successful extensions: 49 Number of sequences better than 10000.0: 49 Number of HSP's gapped: 49 Number of HSP's successfully gapped: 49 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.4 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |