Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001895 20 390 NP_001091680 20 390 NP_001091679 20 390 XP_006713048 20 390 XP_006713047 20 390 XP_006713046 20 390 XP_005264943 20 390 NP_057460 16 5631 NP_001244928 16 5631 XP_006721607 16 5631 XP_005256736 16 5631 NP_054735 16 5631 NP_001034 16 7355 NP_001165972 16 7355 NP_001165973 16 7355 NP_059129 16 7355 NP_001165975 16 7355 XP_006721326 16 7355 NP_001137499 15 9605 NP_055249 15 9605 NP_001137500 15 9605 NP_001137498 15 9605 NP_001092002 15 9605 NP_001092001 15 9605 NP_006096 15 9605 NP_001135920 15 9605 NP_001271279 15 9605 NP_001135921 15 9605 NP_001193762 15 9605 NP_874369 15 9605 NP_006379 15 9605 NP_874368 15 9605 NP_872344 15 9605 XP_006721159 15 9605 XP_005255675 15 9605 XP_005268628 15 9605 XP_005268627 15 9605 XP_005268626 15 9605 XP_006718484 15 9605 XP_006717119 15 9605 XP_005266123 15 9605 XP_006713086 15 9605 NP_001135923 15 9605 NP_114427 15 9605 NP_001025190 15 9605 NP_689995 15 9605>NP_001895 Length = 781 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 VVNLINYQ 9 VVNLINYQ Sbjct: 136 VVNLINYQ 143>NP_001091680 Length = 781 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 VVNLINYQ 9 VVNLINYQ Sbjct: 136 VVNLINYQ 143>NP_001091679 Length = 781 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 VVNLINYQ 9 VVNLINYQ Sbjct: 136 VVNLINYQ 143>XP_006713048 Length = 720 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 VVNLINYQ 9 VVNLINYQ Sbjct: 136 VVNLINYQ 143>XP_006713047 Length = 774 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 VVNLINYQ 9 VVNLINYQ Sbjct: 129 VVNLINYQ 136>XP_006713046 Length = 774 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 VVNLINYQ 9 VVNLINYQ Sbjct: 129 VVNLINYQ 136>XP_005264943 Length = 781 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 VVNLINYQ 9 VVNLINYQ Sbjct: 136 VVNLINYQ 143>NP_057460 Length = 1170 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 VNLINYQ 9 VN+ NYQ Sbjct: 1079 VNIFNYQ 1085>NP_001244928 Length = 1211 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 VNLINYQ 9 VN+ NYQ Sbjct: 1120 VNIFNYQ 1126>XP_006721607 Length = 1130 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 VNLINYQ 9 VN+ NYQ Sbjct: 1079 VNIFNYQ 1085>XP_005256736 Length = 1169 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 VNLINYQ 9 VN+ NYQ Sbjct: 1078 VNIFNYQ 1084>NP_054735 Length = 587 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VVVNLIN 7 V++NLIN Sbjct: 303 VIINLIN 309>NP_001034 Length = 617 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 VVVNLINYQ 9 VVV++IN++ Sbjct: 533 VVVSIINFK 541>NP_001165972 Length = 617 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 VVVNLINYQ 9 VVV++IN++ Sbjct: 533 VVVSIINFK 541>NP_001165973 Length = 512 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 VVVNLINYQ 9 VVV++IN++ Sbjct: 428 VVVSIINFK 436>NP_059129 Length = 1616 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 NLINYQ 9 N+INYQ Sbjct: 888 NVINYQ 893>NP_001165975 Length = 628 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 VVVNLINYQ 9 VVV++IN++ Sbjct: 533 VVVSIINFK 541>XP_006721326 Length = 628 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 VVVNLINYQ 9 VVV++IN++ Sbjct: 533 VVVSIINFK 541>NP_001137499 Length = 521 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 VVNLIN 7 VVNLIN Sbjct: 45 VVNLIN 50>NP_055249 Length = 597 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 VVNLIN 7 VVNLIN Sbjct: 45 VVNLIN 50>NP_001137500 Length = 590 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 VVNLIN 7 VVNLIN Sbjct: 45 VVNLIN 50>NP_001137498 Length = 606 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 VVNLIN 7 VVNLIN Sbjct: 45 VVNLIN 50>NP_001092002 Length = 881 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VVVNLINYQ 9 +V NLIN++ Sbjct: 790 LVENLINFE 798>NP_001092001 Length = 923 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VVVNLINYQ 9 +V NLIN++ Sbjct: 832 LVENLINFE 840>NP_006096 Length = 881 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VVVNLINYQ 9 +V NLIN++ Sbjct: 790 LVENLINFE 798>NP_001135920 Length = 528 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 VNLINY 8 +NL+NY Sbjct: 68 INLLNY 73>NP_001271279 Length = 345 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 VVNLINY 8 V NL+NY Sbjct: 154 VSNLVNY 160>NP_001135921 Length = 454 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 VNLINY 8 +NL+NY Sbjct: 68 INLLNY 73>NP_001193762 Length = 494 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 VNLINY 8 +NLINY Sbjct: 443 LNLINY 448>NP_874369 Length = 546 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 VNLINY 8 +NLINY Sbjct: 495 LNLINY 500>NP_006379 Length = 513 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 VNLINY 8 +NLINY Sbjct: 462 LNLINY 467>NP_874368 Length = 461 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 VNLINY 8 +NLINY Sbjct: 410 LNLINY 415>NP_872344 Length = 512 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 VNLINY 8 +NL+NY Sbjct: 54 INLLNY 59>XP_006721159 Length = 521 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 VNLINY 8 +NL+NY Sbjct: 113 INLLNY 118>XP_005255675 Length = 573 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 VNLINY 8 +NL+NY Sbjct: 113 INLLNY 118>XP_005268628 Length = 495 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VVVNLINYQ 9 +V NLIN++ Sbjct: 404 LVENLINFE 412>XP_005268627 Length = 779 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VVVNLINYQ 9 +V NLIN++ Sbjct: 688 LVENLINFE 696>XP_005268626 Length = 779 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VVVNLINYQ 9 +V NLIN++ Sbjct: 688 LVENLINFE 696>XP_006718484 Length = 522 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 VNLINY 8 +NLINY Sbjct: 471 LNLINY 476>XP_006717119 Length = 615 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 VVNLIN 7 VVNLIN Sbjct: 45 VVNLIN 50>XP_005266123 Length = 624 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 VVNLIN 7 VVNLIN Sbjct: 45 VVNLIN 50>XP_006713086 Length = 1458 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 VVVNLINY 8 +++NLI Y Sbjct: 1277 ILINLIKY 1284>NP_001135923 Length = 476 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 VNLINY 8 +NL+NY Sbjct: 68 INLLNY 73>NP_114427 Length = 528 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 VNLINY 8 +NL+NY Sbjct: 68 INLLNY 73>NP_001025190 Length = 357 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 VVNLINY 8 V NL+NY Sbjct: 166 VSNLVNY 172>NP_689995 Length = 357 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 VVNLINY 8 V NL+NY Sbjct: 166 VSNLVNY 172Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.327 0.144 0.383 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 408,632 Number of extensions: 740 Number of successful extensions: 46 Number of sequences better than 10000.0: 46 Number of HSP's gapped: 46 Number of HSP's successfully gapped: 46 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.0 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |