Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_477513 18 1935 XP_005246329 18 1935 NP_001269389 17 3301 NP_000119 17 4312 NP_003283 17 4312 NP_001275707" target = "next">NP_001275707 17 4312 NP_001275705" target = "next">NP_001275705 17 4312 NP_004415 17 4312 NP_067067 17 4312 XP_006720921 17 4312 XP_006720920 17 4312 XP_005255213 17 4312 XP_005255212 17 4312 XP_005262880 17 4312 XP_005262879 17 4312 XP_006714200 17 4312 XP_005262878 17 4312 XP_005245528 17 4312 NP_775899 16 5631 NP_079374 16 5631 XP_005267426 16 7355 NP_689660 16 7355 NP_057427 15 9605 NP_001139791 15 9605 NP_001139794 15 9605 NP_001139793 15 9605 NP_076416 15 9605 NP_001139792 15 9605 XP_005272122 15 9605 XP_005272121 15 9605 XP_005272120 15 9605 XP_005272119 15 9605 XP_005272118 15 9605 XP_005272117 15 9605 XP_005272116 15 9605 XP_005272115 15 9605 XP_005272114 15 9605 XP_005271929 15 9605 NP_001139669 15 9605 NP_001275 15 9605>NP_477513 Length = 335 Score = 17.7 bits (34), Expect = 1935 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 VQNKLQK 8 VQNKLQK Sbjct: 247 VQNKLQK 253>XP_005246329 Length = 334 Score = 17.7 bits (34), Expect = 1935 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 VQNKLQK 8 VQNKLQK Sbjct: 246 VQNKLQK 252>NP_001269389 Length = 587 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VVQNKLQK 8 +VQNKL K Sbjct: 495 IVQNKLHK 502>NP_000119 Length = 625 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VQNKLQKA 9 +QN LQKA Sbjct: 528 IQNTLQKA 535>NP_003283 Length = 2363 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 VQNKLQK 8 VQNKL+K Sbjct: 21 VQNKLEK 27>NP_001275707" target = "next">NP_001275707 Length = 607 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 VQNKLQKA 9 VQ+K+QKA Sbjct: 74 VQHKIQKA 81>NP_001275705" target = "next">NP_001275705 Length = 654 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 VQNKLQKA 9 VQ+K+QKA Sbjct: 74 VQHKIQKA 81>NP_004415 Length = 784 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 VQNKLQKA 9 VQ+K+QKA Sbjct: 74 VQHKIQKA 81>NP_067067 Length = 400 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 VQNKLQK 8 VQN+LQK Sbjct: 380 VQNRLQK 386>XP_006720921 Length = 783 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 VQNKLQKA 9 VQ+K+QKA Sbjct: 74 VQHKIQKA 81>XP_006720920 Length = 785 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 VQNKLQKA 9 VQ+K+QKA Sbjct: 75 VQHKIQKA 82>XP_005255213 Length = 836 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 VQNKLQKA 9 VQ+K+QKA Sbjct: 127 VQHKIQKA 134>XP_005255212 Length = 837 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 VQNKLQKA 9 VQ+K+QKA Sbjct: 127 VQHKIQKA 134>XP_005262880 Length = 536 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VQNKLQKA 9 +QN LQKA Sbjct: 439 IQNTLQKA 446>XP_005262879 Length = 594 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VQNKLQKA 9 +QN LQKA Sbjct: 497 IQNTLQKA 504>XP_006714200 Length = 610 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VQNKLQKA 9 +QN LQKA Sbjct: 513 IQNTLQKA 520>XP_005262878 Length = 626 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VQNKLQKA 9 +QN LQKA Sbjct: 529 IQNTLQKA 536>XP_005245528 Length = 2439 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 VQNKLQK 8 VQNKL+K Sbjct: 97 VQNKLEK 103>NP_775899 Length = 4462 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 VQNKLQKA 9 +QN++QKA Sbjct: 778 LQNRMQKA 785>NP_079374 Length = 334 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VQNKLQK 8 +QN+LQK Sbjct: 246 IQNRLQK 252>XP_005267426 Length = 466 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 VVQNKLQK 8 V NKLQK Sbjct: 202 VTSNKLQK 209>NP_689660 Length = 719 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 VVQNKLQK 8 V NKLQK Sbjct: 202 VTSNKLQK 209>NP_057427 Length = 3114 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 QNKLQK 8 QNK+QK Sbjct: 1139 QNKMQK 1144>NP_001139791 Length = 447 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 VQNKLQK 8 +QN LQK Sbjct: 435 IQNNLQK 441>NP_001139794 Length = 416 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 VQNKLQK 8 +QN LQK Sbjct: 404 IQNNLQK 410>NP_001139793 Length = 440 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 VQNKLQK 8 +QN LQK Sbjct: 428 IQNNLQK 434>NP_076416 Length = 432 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 VQNKLQK 8 +QN LQK Sbjct: 420 IQNNLQK 426>NP_001139792 Length = 328 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 VQNKLQK 8 +QN LQK Sbjct: 316 IQNNLQK 322>XP_005272122 Length = 415 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 VQNKLQK 8 +QN LQK Sbjct: 403 IQNNLQK 409>XP_005272121 Length = 415 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 VQNKLQK 8 +QN LQK Sbjct: 403 IQNNLQK 409>XP_005272120 Length = 416 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 VQNKLQK 8 +QN LQK Sbjct: 404 IQNNLQK 410>XP_005272119 Length = 417 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 VQNKLQK 8 +QN LQK Sbjct: 405 IQNNLQK 411>XP_005272118 Length = 417 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 VQNKLQK 8 +QN LQK Sbjct: 405 IQNNLQK 411>XP_005272117 Length = 433 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 VQNKLQK 8 +QN LQK Sbjct: 421 IQNNLQK 427>XP_005272116 Length = 441 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 VQNKLQK 8 +QN LQK Sbjct: 429 IQNNLQK 435>XP_005272115 Length = 446 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 VQNKLQK 8 +QN LQK Sbjct: 434 IQNNLQK 440>XP_005272114 Length = 447 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 VQNKLQK 8 +QN LQK Sbjct: 435 IQNNLQK 441>XP_005271929 Length = 262 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QNKLQKA 9 QNKL+K+ Sbjct: 244 QNKLEKS 250>NP_001139669 Length = 7081 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 VVQNKL 6 VVQNKL Sbjct: 3849 VVQNKL 3854>NP_001275 Length = 193 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QNKLQKA 9 QNKL+K+ Sbjct: 144 QNKLEKS 150Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.309 0.119 0.279 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 428,088 Number of extensions: 558 Number of successful extensions: 40 Number of sequences better than 10000.0: 40 Number of HSP's gapped: 40 Number of HSP's successfully gapped: 40 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |