Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000213 18 1135 NP_001087241 18 1135 XP_006714101 18 1135 XP_005265799 18 1135 XP_005265798 18 1135 XP_005265797 18 1135 NP_001058 16 5631 NP_001013725 16 5631 NP_001229416 16 5631 NP_001229417 16 5631 NP_055852 16 5631 XP_005257689 16 5631 XP_005254449 16 5631 XP_005269712 16 5631 XP_006717788 16 5631 XP_005269710 16 5631 XP_005269709 16 5631 XP_005269708 16 5631 XP_005269706 16 5631 XP_005269705 16 5631 NP_001012660 16 5631 NP_001277189 16 7355 NP_055968 16 7355 NP_001006642 16 7355 NP_077008 16 7355 NP_001252543 16 7355 NP_001006643 16 7355 NP_852111 16 7355 NP_000136 16 7355 NP_443133 16 7355 NP_001277188 16 7355 NP_055400 16 7355 NP_060733 16 7355 XP_006722947 16 7355 XP_005251746 16 7355 XP_006717012 16 7355 XP_006717011 16 7355 XP_005251745 16 7355 XP_005248759 16 7355 XP_006715489 16 7355 XP_005248758 16 7355 XP_005246562 16 7355 XP_005246561 16 7355 XP_006712103 16 7355 XP_006712102 16 7355 NP_000142 15 9605 NP_001138508 15 9605 NP_001157912 15 9605 NP_031383 15 9605 NP_004924 15 9605 NP_001136026 15 9605 NP_848613 15 9605 NP_001129507 15 9605 NP_689967 15 9605 NP_060192 15 9605 NP_955452 15 9605 XP_006722857 15 9605 XP_006722856 15 9605 XP_005260040 15 9605 XP_005256671 15 9605 XP_005248400 15 9605 XP_005248401 15 9605 XP_006713543 15 9605>NP_000213 Length = 976 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 VPVVSVSK 9 VPVVSVSK Sbjct: 211 VPVVSVSK 218>NP_001087241 Length = 972 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 VPVVSVSK 9 VPVVSVSK Sbjct: 211 VPVVSVSK 218>XP_006714101 Length = 526 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 VPVVSVSK 9 VPVVSVSK Sbjct: 211 VPVVSVSK 218>XP_005265799 Length = 973 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 VPVVSVSK 9 VPVVSVSK Sbjct: 211 VPVVSVSK 218>XP_005265798 Length = 976 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 VPVVSVSK 9 VPVVSVSK Sbjct: 211 VPVVSVSK 218>XP_005265797 Length = 977 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 VPVVSVSK 9 VPVVSVSK Sbjct: 211 VPVVSVSK 218>NP_001058 Length = 1531 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VVPVVSVSK 9 + P+V VSK Sbjct: 574 ITPIVKVSK 582>NP_001013725 Length = 1649 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VVPVVSV 7 VVP+VSV Sbjct: 1530 VVPIVSV 1536>NP_001229416 Length = 1837 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VVPVVSV 7 VVPV+SV Sbjct: 1481 VVPVISV 1487>NP_001229417 Length = 1892 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VVPVVSV 7 VVPV+SV Sbjct: 1481 VVPVISV 1487>NP_055852 Length = 1842 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VVPVVSV 7 VVPV+SV Sbjct: 1486 VVPVISV 1492>XP_005257689 Length = 1519 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VVPVVSVSK 9 + P+V VSK Sbjct: 562 ITPIVKVSK 570>XP_005254449 Length = 1626 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VVPVVSV 7 VVP+VSV Sbjct: 1530 VVPIVSV 1536>XP_005269712 Length = 1800 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VVPVVSV 7 VVPV+SV Sbjct: 1452 VVPVISV 1458>XP_006717788 Length = 1829 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VVPVVSV 7 VVPV+SV Sbjct: 1481 VVPVISV 1487>XP_005269710 Length = 1834 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VVPVVSV 7 VVPV+SV Sbjct: 1486 VVPVISV 1492>XP_005269709 Length = 1871 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VVPVVSV 7 VVPV+SV Sbjct: 1452 VVPVISV 1458>XP_005269708 Length = 1897 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VVPVVSV 7 VVPV+SV Sbjct: 1486 VVPVISV 1492>XP_005269706 Length = 1900 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VVPVVSV 7 VVPV+SV Sbjct: 1481 VVPVISV 1487>XP_005269705 Length = 1905 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VVPVVSV 7 VVPV+SV Sbjct: 1486 VVPVISV 1492>NP_001012660 Length = 354 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VVPVVSV 7 V+PVVSV Sbjct: 126 VIPVVSV 132>NP_001277189 Length = 736 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 VVPVVSVS 8 VVP VSVS Sbjct: 209 VVPEVSVS 216>NP_055968 Length = 2039 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 VVPVVSVS 8 VVP VSVS Sbjct: 209 VVPEVSVS 216>NP_001006642 Length = 503 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VVPVVSVS 8 V+P VS+S Sbjct: 480 VIPAVSIS 487>NP_077008 Length = 468 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VVPVVSVS 8 V+P VS+S Sbjct: 445 VIPAVSIS 452>NP_001252543 Length = 501 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VVPVVSVS 8 V+P VS+S Sbjct: 478 VIPAVSIS 485>NP_001006643 Length = 489 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VVPVVSVS 8 V+P VS+S Sbjct: 466 VIPAVSIS 473>NP_852111 Length = 669 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 VPVVSVSK 9 VP+++VSK Sbjct: 573 VPLITVSK 580>NP_000136 Length = 695 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 VPVVSVSK 9 VP+++VSK Sbjct: 599 VPLITVSK 606>NP_443133 Length = 469 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VVPVVSVS 8 V+P VS+S Sbjct: 446 VIPAVSIS 453>NP_001277188 Length = 1951 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 VVPVVSVS 8 VVP VSVS Sbjct: 121 VVPEVSVS 128>NP_055400 Length = 571 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VPVVSVS 8 VP++SVS Sbjct: 450 VPIISVS 456>NP_060733 Length = 1435 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VVPVVSVSK 9 +VPVVS S+ Sbjct: 422 IVPVVSQSE 430>XP_006722947 Length = 412 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VVPVVSVS 8 V+P VS+S Sbjct: 389 VIPAVSIS 396>XP_005251746 Length = 366 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VVPVVSVS 8 V+P VS+S Sbjct: 343 VIPAVSIS 350>XP_006717012 Length = 378 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VVPVVSVS 8 V+P VS+S Sbjct: 355 VIPAVSIS 362>XP_006717011 Length = 481 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VVPVVSVS 8 V+P VS+S Sbjct: 458 VIPAVSIS 465>XP_005251745 Length = 515 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VVPVVSVS 8 V+P VS+S Sbjct: 492 VIPAVSIS 499>XP_005248759 Length = 1951 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 VVPVVSVS 8 VVP VSVS Sbjct: 121 VVPEVSVS 128>XP_006715489 Length = 2039 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 VVPVVSVS 8 VVP VSVS Sbjct: 209 VVPEVSVS 216>XP_005248758 Length = 2039 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 VVPVVSVS 8 VVP VSVS Sbjct: 209 VVPEVSVS 216>XP_005246562 Length = 531 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VPVVSVS 8 VP++SVS Sbjct: 410 VPIISVS 416>XP_005246561 Length = 615 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VPVVSVS 8 VP++SVS Sbjct: 494 VPIISVS 500>XP_006712103 Length = 1175 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VVPVVSVSK 9 +VPVVS S+ Sbjct: 162 IVPVVSQSE 170>XP_006712102 Length = 1313 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VVPVVSVSK 9 +VPVVS S+ Sbjct: 300 IVPVVSQSE 308>NP_000142 Length = 357 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VVPVVSVS 8 VVP+ SVS Sbjct: 332 VVPLASVS 339>NP_001138508 Length = 737 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 PVVSVSK 9 PVVS+S+ Sbjct: 504 PVVSISR 510>NP_001157912 Length = 494 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 VVPVVSVSK 9 VVP V VSK Sbjct: 422 VVPRVRVSK 430>NP_031383 Length = 738 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 PVVSVSK 9 PVVS+S+ Sbjct: 504 PVVSISR 510>NP_004924 Length = 814 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VVPVVSVSK 9 V+P +SVS+ Sbjct: 48 VIPPISVSE 56>NP_001136026 Length = 630 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 VVPVVSVS 8 VVP++S+S Sbjct: 310 VVPLLSIS 317>NP_848613 Length = 508 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 VVPVVSVS 8 ++PVVSV+ Sbjct: 318 LIPVVSVA 325>NP_001129507 Length = 659 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 VVPVVSVS 8 VVP++S+S Sbjct: 310 VVPLLSIS 317>NP_689967 Length = 777 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VVPVVSVSK 9 V+ VVS+SK Sbjct: 476 VLKVVSISK 484>NP_060192 Length = 659 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 VVPVVSVS 8 VVP++S+S Sbjct: 310 VVPLLSIS 317>NP_955452 Length = 2590 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VVPVVSVSK 9 ++P VSV+K Sbjct: 143 ILPFVSVAK 151>XP_006722857 Length = 398 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 VVPVVSVS 8 VVP++S+S Sbjct: 49 VVPLLSIS 56>XP_006722856 Length = 445 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 VVPVVSVS 8 VVP++S+S Sbjct: 96 VVPLLSIS 103>XP_005260040 Length = 630 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 VVPVVSVS 8 VVP++S+S Sbjct: 310 VVPLLSIS 317>XP_005256671 Length = 508 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 VVPVVSVS 8 ++PVVSV+ Sbjct: 318 LIPVVSVA 325>XP_005248400 Length = 300 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 VVPVVSVSK 9 VVP V VSK Sbjct: 228 VVPRVRVSK 236>XP_005248401 Length = 300 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 VVPVVSVSK 9 VVP V VSK Sbjct: 228 VVPRVRVSK 236>XP_006713543 Length = 2591 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VVPVVSVSK 9 ++P VSV+K Sbjct: 143 ILPFVSVAK 151Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.312 0.126 0.309 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 523,581 Number of extensions: 738 Number of successful extensions: 63 Number of sequences better than 10000.0: 63 Number of HSP's gapped: 63 Number of HSP's successfully gapped: 63 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |