Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005742 20 509 NP_671714 20 509 XP_006715890 20 509 XP_005250160 20 509 XP_005250159 20 509 NP_619542 17 4312 XP_005274600 17 4312 NP_116281 16 5631 NP_996999 16 5631 NP_001273420 16 5631 NP_006176 16 5631 NP_001273490 16 5631 XP_005254786 16 5631 XP_006718633 16 5631 XP_006718632 16 5631 XP_006718631 16 5631 XP_006718630 16 5631 XP_006718629 16 5631 XP_006718628 16 5631 XP_006718627 16 5631 XP_006718626 16 5631 XP_006718625 16 5631 NP_057700 16 7355 NP_000553 16 7355 NP_056212 16 7355 XP_006716815 16 7355 NP_001277622 15 9605 NP_060656 15 9605 NP_001119595 15 9605 NP_066301 15 9605 NP_115894 15 9605 NP_059982 15 9605 NP_974487 15 9605 XP_005251089 15 9605 XP_005251088 15 9605 XP_005264828 15 9605 XP_005245376 15 9605 XP_005245374 15 9605 NP_112217 15 9605>NP_005742 Length = 3907 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 VVLTESDAQ 9 VV+TESDAQ Sbjct: 1389 VVITESDAQ 1397>NP_671714 Length = 3899 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 VVLTESDAQ 9 VV+TESDAQ Sbjct: 1389 VVITESDAQ 1397>XP_006715890 Length = 3860 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 VVLTESDAQ 9 VV+TESDAQ Sbjct: 1389 VVITESDAQ 1397>XP_005250160 Length = 3939 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 VVLTESDAQ 9 VV+TESDAQ Sbjct: 1389 VVITESDAQ 1397>XP_005250159 Length = 3952 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 VVLTESDAQ 9 VV+TESDAQ Sbjct: 1389 VVITESDAQ 1397>NP_619542 Length = 1041 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 VVLTESDAQ 9 VVLTE+D++ Sbjct: 1021 VVLTENDSR 1029>XP_005274600 Length = 1059 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 VVLTESDAQ 9 VVLTE+D++ Sbjct: 1039 VVLTENDSR 1047>NP_116281 Length = 570 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VVLTESD 7 ++LTESD Sbjct: 520 IILTESD 526>NP_996999 Length = 866 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VVLTESDAQ 9 V+LTE D++ Sbjct: 63 VILTEDDSE 71>NP_001273420 Length = 336 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VVLTESD 7 ++LTESD Sbjct: 286 IILTESD 292>NP_006176 Length = 2115 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VLTESDAQ 9 +LTE DAQ Sbjct: 243 LLTEKDAQ 250>NP_001273490 Length = 2101 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VLTESDAQ 9 +LTE DAQ Sbjct: 243 LLTEKDAQ 250>XP_005254786 Length = 565 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VVLTESD 7 ++LTESD Sbjct: 515 IILTESD 521>XP_006718633 Length = 2101 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VLTESDAQ 9 +LTE DAQ Sbjct: 243 LLTEKDAQ 250>XP_006718632 Length = 2115 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VLTESDAQ 9 +LTE DAQ Sbjct: 243 LLTEKDAQ 250>XP_006718631 Length = 2115 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VLTESDAQ 9 +LTE DAQ Sbjct: 243 LLTEKDAQ 250>XP_006718630 Length = 2115 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VLTESDAQ 9 +LTE DAQ Sbjct: 243 LLTEKDAQ 250>XP_006718629 Length = 2115 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VLTESDAQ 9 +LTE DAQ Sbjct: 243 LLTEKDAQ 250>XP_006718628 Length = 2115 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VLTESDAQ 9 +LTE DAQ Sbjct: 243 LLTEKDAQ 250>XP_006718627 Length = 2115 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VLTESDAQ 9 +LTE DAQ Sbjct: 243 LLTEKDAQ 250>XP_006718626 Length = 2115 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VLTESDAQ 9 +LTE DAQ Sbjct: 243 LLTEKDAQ 250>XP_006718625 Length = 2115 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VLTESDAQ 9 +LTE DAQ Sbjct: 243 LLTEKDAQ 250>NP_057700 Length = 588 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VVLTESDAQ 9 VVL+E +AQ Sbjct: 351 VVLSEKEAQ 359>NP_000553 Length = 584 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VLTESDAQ 9 +LT+ DAQ Sbjct: 158 ILTQEDAQ 165>NP_056212 Length = 453 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 VLTESDAQ 9 VLT+SDA+ Sbjct: 216 VLTKSDAR 223>XP_006716815 Length = 432 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 VLTESDAQ 9 VLT+SDA+ Sbjct: 195 VLTKSDAR 202>NP_001277622 Length = 431 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VVLTESDAQ 9 + LTE+D+Q Sbjct: 133 LALTEADSQ 141>NP_060656 Length = 853 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LTESDAQ 9 +T+SDAQ Sbjct: 228 MTQSDAQ 234>NP_001119595 Length = 361 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 VLTESDA 8 VLTE DA Sbjct: 76 VLTEEDA 82>NP_066301 Length = 538 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 VVLTESD 7 VVLTE D Sbjct: 346 VVLTEKD 352>NP_115894 Length = 601 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VVLTESDAQ 9 V+LTE++ Q Sbjct: 113 VILTEANVQ 121>NP_059982 Length = 443 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 VLTESDA 8 VLTE DA Sbjct: 158 VLTEEDA 164>NP_974487 Length = 450 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 VLTESDA 8 VLTE DA Sbjct: 179 VLTEEDA 185>XP_005251089 Length = 480 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 VVLTESD 7 VVLTE D Sbjct: 444 VVLTEKD 450>XP_005251088 Length = 636 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 VVLTESD 7 VVLTE D Sbjct: 444 VVLTEKD 450>XP_005264828 Length = 524 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VVLTESDAQ 9 V+LTE++ Q Sbjct: 36 VILTEANVQ 44>XP_005245376 Length = 718 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LTESDAQ 9 +T+SDAQ Sbjct: 93 MTQSDAQ 99>XP_005245374 Length = 911 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LTESDAQ 9 +T+SDAQ Sbjct: 286 MTQSDAQ 292>NP_112217 Length = 1594 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 VLTESDA 8 VLTE DA Sbjct: 1284 VLTEEDA 1290Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.301 0.115 0.264 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 470,573 Number of extensions: 692 Number of successful extensions: 39 Number of sequences better than 10000.0: 39 Number of HSP's gapped: 39 Number of HSP's successfully gapped: 39 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.3 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |