Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_065681 20 390 NP_066124 20 390 XP_006717999 20 390 NP_003256 17 4312 NP_065756 17 4312 NP_001186036 17 4312 NP_001123508 17 4312 NP_001123507 17 4312 NP_001123506 17 4312 NP_001123505 17 4312 NP_067023 17 4312 XP_005255506 17 4312 XP_006720970 17 4312 XP_006718704 17 4312 XP_006714357 17 4312 NP_001158238 16 7355 NP_207646 16 7355 NP_001193900 16 7355 NP_002828 16 7355 NP_001103224 16 7355 NP_001193901 16 7355 NP_078997 16 7355 NP_008816 16 7355 XP_005256014 16 7355 XP_006720523 16 7355 XP_006720345 16 7355 XP_005268192 16 7355 XP_005268191 16 7355 XP_006719593 16 7355 XP_006719592 16 7355 XP_006719591 16 7355 XP_005273127 16 7355 NP_001139669 16 7355 NP_775779 16 7355 NP_005735 16 7355 NP_001273283 15 9605 NP_683766 15 9605 NP_001273284 15 9605 NP_057263 15 9605 NP_036417 15 9605 NP_001129430 15 9605 NP_001129428 15 9605 NP_001129427 15 9605 NP_001094385 15 9605 NP_003297 15 9605 NP_001182209 15 9605 XP_005255865 15 9605 XP_006721206 15 9605 NP_001129429 15 9605>NP_065681 Length = 1072 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 VLLLHFNV 9 VLLLHFNV Sbjct: 388 VLLLHFNV 395>NP_066124 Length = 1114 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 VLLLHFNV 9 VLLLHFNV Sbjct: 388 VLLLHFNV 395>XP_006717999 Length = 1207 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 VLLLHFNV 9 VLLLHFNV Sbjct: 481 VLLLHFNV 488>NP_003256 Length = 904 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VVLLLHF 7 +VLL+HF Sbjct: 719 IVLLIHF 725>NP_065756 Length = 553 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VVLLLHFNV 9 V LLLH+++ Sbjct: 138 VALLLHYSI 146>NP_001186036 Length = 559 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VVLLLHFNV 9 V LLLH+++ Sbjct: 138 VALLLHYSI 146>NP_001123508 Length = 189 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LLLHFNV 9 +L+HFNV Sbjct: 47 VLIHFNV 53>NP_001123507 Length = 189 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LLLHFNV 9 +L+HFNV Sbjct: 47 VLIHFNV 53>NP_001123506 Length = 224 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LLLHFNV 9 +L+HFNV Sbjct: 47 VLIHFNV 53>NP_001123505 Length = 208 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LLLHFNV 9 +L+HFNV Sbjct: 66 VLIHFNV 72>NP_067023 Length = 243 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LLLHFNV 9 +L+HFNV Sbjct: 66 VLIHFNV 72>XP_005255506 Length = 559 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VVLLLHFNV 9 V LLLH+++ Sbjct: 138 VALLLHYSI 146>XP_006720970 Length = 559 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VVLLLHFNV 9 V LLLH+++ Sbjct: 138 VALLLHYSI 146>XP_006718704 Length = 174 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LLLHFNV 9 +L+HFNV Sbjct: 47 VLIHFNV 53>XP_006714357 Length = 904 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VVLLLHF 7 +VLL+HF Sbjct: 719 IVLLIHF 725>NP_001158238 Length = 2789 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 VLLLHFN 8 +LL+H+N Sbjct: 645 ILLVHYN 651>NP_207646 Length = 2572 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 VLLLHFN 8 +LL+H+N Sbjct: 1205 ILLVHYN 1211>NP_001193900 Length = 1907 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VLLLHFNV 9 VLL+H NV Sbjct: 497 VLLIHENV 504>NP_002828 Length = 1997 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VLLLHFNV 9 VLL+H NV Sbjct: 587 VLLIHENV 594>NP_001103224 Length = 2215 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VLLLHFNV 9 VLL+H NV Sbjct: 805 VLLIHENV 812>NP_001193901 Length = 1907 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VLLLHFNV 9 VLL+H NV Sbjct: 587 VLLIHENV 594>NP_078997 Length = 3616 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 VLLLHFN 8 +LL+H+N Sbjct: 1555 ILLVHYN 1561>NP_008816 Length = 3703 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 VLLLHFN 8 +LL+H+N Sbjct: 1559 ILLVHYN 1565>XP_005256014 Length = 3702 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 VLLLHFN 8 +LL+H+N Sbjct: 1558 ILLVHYN 1564>XP_006720523 Length = 519 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 VLLLHFN 8 +LL HFN Sbjct: 133 ILLSHFN 139>XP_006720345 Length = 1522 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 VLLLHFN 8 +LL+H+N Sbjct: 155 ILLVHYN 161>XP_005268192 Length = 1602 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 VLLLHFN 8 +LL+H+N Sbjct: 235 ILLVHYN 241>XP_005268191 Length = 2572 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 VLLLHFN 8 +LL+H+N Sbjct: 1205 ILLVHYN 1211>XP_006719593 Length = 1304 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VLLLHFNV 9 VLL+H NV Sbjct: 805 VLLIHENV 812>XP_006719592 Length = 2012 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VLLLHFNV 9 VLL+H NV Sbjct: 587 VLLIHENV 594>XP_006719591 Length = 2230 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VLLLHFNV 9 VLL+H NV Sbjct: 805 VLLIHENV 812>XP_005273127 Length = 421 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VLLLHFNV 9 VLLL FN+ Sbjct: 310 VLLLTFNI 317>NP_001139669 Length = 7081 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LLLHFNV 9 LL+HF+V Sbjct: 6549 LLMHFSV 6555>NP_775779 Length = 490 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VLLLHFNV 9 VLLL FN+ Sbjct: 379 VLLLTFNI 386>NP_005735 Length = 557 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 VLLLHFN 8 +LL HFN Sbjct: 133 ILLSHFN 139>NP_001273283 Length = 751 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 VVLLLHF 7 V+LL HF Sbjct: 460 VILLCHF 466>NP_683766 Length = 926 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 VVLLLHF 7 V+LL HF Sbjct: 635 VILLCHF 641>NP_001273284 Length = 855 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 VVLLLHF 7 V+LL HF Sbjct: 564 VILLCHF 570>NP_057263 Length = 977 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VVLLLHFNV 9 + LLL FNV Sbjct: 86 IELLLSFNV 94>NP_036417 Length = 1017 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LLLHFNV 9 LLLH++V Sbjct: 218 LLLHYSV 224>NP_001129430 Length = 804 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VVLLLHFNV 9 + LLL FNV Sbjct: 86 IELLLSFNV 94>NP_001129428 Length = 828 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VVLLLHFNV 9 + LLL FNV Sbjct: 86 IELLLSFNV 94>NP_001129427 Length = 893 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VVLLLHFNV 9 + LLL FNV Sbjct: 86 IELLLSFNV 94>NP_001094385 Length = 926 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 LLHFNV 9 L HFNV Sbjct: 14 LFHFNV 19>NP_003297 Length = 982 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VVLLLHFNV 9 + LLL FNV Sbjct: 86 IELLLSFNV 94>NP_001182209 Length = 287 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 VLLLHFN 8 +LLLH N Sbjct: 115 ILLLHHN 121>XP_005255865 Length = 917 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 LLHFNV 9 L HFNV Sbjct: 14 LFHFNV 19>XP_006721206 Length = 921 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 LLHFNV 9 L HFNV Sbjct: 9 LFHFNV 14>NP_001129429 Length = 836 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VVLLLHFNV 9 + LLL FNV Sbjct: 86 IELLLSFNV 94Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.349 0.160 0.473 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 526,024 Number of extensions: 739 Number of successful extensions: 49 Number of sequences better than 10000.0: 49 Number of HSP's gapped: 49 Number of HSP's successfully gapped: 49 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 14 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.7 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |