Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_002462 17 2528 XP_006720215 17 2528 XP_006720214 17 2528 XP_005267751 17 2528 XP_005270509 17 4312 XP_005270508 17 4312 NP_000248 16 5631 NP_055140 16 5631 NP_001098707 16 5631 NP_001263400 16 5631 NP_996836 16 5631 NP_996837 16 5631 NP_996838 16 5631 NP_996839 16 5631 NP_006106 16 5631 NP_056170 16 5631 NP_620636 16 5631 NP_003062 16 5631 XP_006725465 16 5631 XP_006721857 16 5631 XP_005258011 16 5631 XP_005267753 16 5631 XP_006716009 16 5631 XP_005250353 16 5631 XP_006716008 16 5631 XP_006716007 16 5631 XP_006716006 16 5631 XP_006716003 16 5631 XP_006716002 16 5631 XP_005250348 16 5631 XP_005247781 16 5631 NP_112176 16 7355 NP_001252511 16 7355 NP_001129419 16 7355 NP_001073922 16 7355 NP_005724 16 7355 XP_006723846 16 7355 XP_006714577 16 7355 NP_001157903 16 7355 NP_001073932 15 9605 NP_001368 15 9605 NP_001157281 15 9605 NP_001157145 15 9605 NP_689561 15 9605 NP_001157283 15 9605 NP_060887 15 9605 NP_001161221 15 9605 NP_060004 15 9605 NP_065924 15 9605 NP_001093582 15 9605 NP_005954 15 9605 NP_060003 15 9605 XP_006725317 15 9605 XP_005256707 15 9605 XP_005256511 15 9605 XP_006718966 15 9605 XP_005265408 15 9605 XP_006711533 15 9605 XP_005245422 15 9605 XP_005245387 15 9605 XP_005245386 15 9605 XP_006711512 15 9605 NP_065821 15 9605>NP_002462 Length = 1939 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 KKNLLRL 9 KKNLLRL Sbjct: 1860 KKNLLRL 1866>XP_006720215 Length = 1968 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 KKNLLRL 9 KKNLLRL Sbjct: 1889 KKNLLRL 1895>XP_006720214 Length = 1978 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 KKNLLRL 9 KKNLLRL Sbjct: 1899 KKNLLRL 1905>XP_005267751 Length = 1979 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 KKNLLRL 9 KKNLLRL Sbjct: 1900 KKNLLRL 1906>XP_005270509 Length = 349 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VVKKNLL 7 +VKKNLL Sbjct: 341 IVKKNLL 347>XP_005270508 Length = 430 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VVKKNLL 7 +VKKNLL Sbjct: 422 IVKKNLL 428>NP_000248 Length = 1935 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 KKNLLRL 9 +KNLLRL Sbjct: 1858 RKNLLRL 1864>NP_055140 Length = 474 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VVKKNLL 7 VVKKN+L Sbjct: 404 VVKKNIL 410>NP_001098707 Length = 527 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VVKKNLL 7 VVKKN+L Sbjct: 457 VVKKNIL 463>NP_001263400 Length = 474 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VVKKNLL 7 VVKKN+L Sbjct: 404 VVKKNIL 410>NP_996836 Length = 509 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 KKNLLRL 9 KKN+LRL Sbjct: 202 KKNVLRL 208>NP_996837 Length = 509 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 KKNLLRL 9 KKN+LRL Sbjct: 202 KKNVLRL 208>NP_996838 Length = 509 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 KKNLLRL 9 KKN+LRL Sbjct: 202 KKNVLRL 208>NP_996839 Length = 509 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 KKNLLRL 9 KKN+LRL Sbjct: 202 KKNVLRL 208>NP_006106 Length = 509 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 KKNLLRL 9 KKN+LRL Sbjct: 202 KKNVLRL 208>NP_056170 Length = 739 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VVKKNLLR 8 ++KKNL R Sbjct: 647 IIKKNLCR 654>NP_620636 Length = 1009 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 VKKNLLR 8 VKKNLL+ Sbjct: 323 VKKNLLK 329>NP_003062 Length = 1009 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 VKKNLLR 8 VKKNLL+ Sbjct: 323 VKKNLLK 329>XP_006725465 Length = 509 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 KKNLLRL 9 KKN+LRL Sbjct: 202 KKNVLRL 208>XP_006721857 Length = 603 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VVKKNLLR 8 ++KKNL R Sbjct: 511 IIKKNLCR 518>XP_005258011 Length = 716 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VVKKNLLR 8 ++KKNL R Sbjct: 624 IIKKNLCR 631>XP_005267753 Length = 1935 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 KKNLLRL 9 +KNLLRL Sbjct: 1858 RKNLLRL 1864>XP_006716009 Length = 596 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 VVKKNLLRL 9 ++K+N LR+ Sbjct: 4 IIKRNFLRI 12>XP_005250353 Length = 969 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 VVKKNLLRL 9 ++K+N LR+ Sbjct: 4 IIKRNFLRI 12>XP_006716008 Length = 988 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 VVKKNLLRL 9 ++K+N LR+ Sbjct: 4 IIKRNFLRI 12>XP_006716007 Length = 989 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 VVKKNLLRL 9 ++K+N LR+ Sbjct: 4 IIKRNFLRI 12>XP_006716006 Length = 990 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 VVKKNLLRL 9 ++K+N LR+ Sbjct: 4 IIKRNFLRI 12>XP_006716003 Length = 1009 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 VVKKNLLRL 9 ++K+N LR+ Sbjct: 4 IIKRNFLRI 12>XP_006716002 Length = 1010 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 VVKKNLLRL 9 ++K+N LR+ Sbjct: 4 IIKRNFLRI 12>XP_005250348 Length = 1010 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 VVKKNLLRL 9 ++K+N LR+ Sbjct: 4 IIKRNFLRI 12>XP_005247781 Length = 1008 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 VKKNLLR 8 VKKNLL+ Sbjct: 323 VKKNLLK 329>NP_112176 Length = 101 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VKKNLLR 8 +KKNLL+ Sbjct: 45 IKKNLLK 51>NP_001252511 Length = 63 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VKKNLLR 8 +KKNLL+ Sbjct: 45 IKKNLLK 51>NP_001129419 Length = 146 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VKKNLLR 8 +KKNLL+ Sbjct: 45 IKKNLLK 51>NP_001073922 Length = 2190 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VKKNLLRL 9 V +NLLRL Sbjct: 346 VSRNLLRL 353>NP_005724 Length = 890 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VVKKNLL 7 VV+KNLL Sbjct: 34 VVRKNLL 40>XP_006723846 Length = 675 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 KKNLLRL 9 +KNLLRL Sbjct: 59 QKNLLRL 65>XP_006714577 Length = 890 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VVKKNLL 7 VV+KNLL Sbjct: 34 VVRKNLL 40>NP_001157903 Length = 674 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 KKNLLRL 9 +KNLLRL Sbjct: 59 QKNLLRL 65>NP_001073932 Length = 4314 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VKKNLLR 8 +KKNL+R Sbjct: 3843 LKKNLMR 3849>NP_001368 Length = 4307 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VKKNLLR 8 +KKNL+R Sbjct: 3836 LKKNLMR 3842>NP_001157281 Length = 1941 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VKKNLLRL 9 V +NLLRL Sbjct: 1245 VARNLLRL 1252>NP_001157145 Length = 738 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VKKNLLRL 9 V +NLLRL Sbjct: 42 VARNLLRL 49>NP_689561 Length = 890 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VKKNLLRL 9 V +NLLRL Sbjct: 194 VARNLLRL 201>NP_001157283 Length = 714 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VKKNLLRL 9 V +NLLRL Sbjct: 18 VARNLLRL 25>NP_060887 Length = 1610 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 KNLLRL 9 KNLLRL Sbjct: 246 KNLLRL 251>NP_001161221 Length = 1457 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 KNLLRL 9 KNLLRL Sbjct: 93 KNLLRL 98>NP_060004 Length = 1941 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KKNLLRL 9 +KN+LRL Sbjct: 1864 RKNILRL 1870>NP_065924 Length = 716 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 KNLLRL 9 KNLLRL Sbjct: 167 KNLLRL 172>NP_001093582 Length = 1941 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KKNLLRL 9 +KN+LRL Sbjct: 1864 RKNILRL 1870>NP_005954 Length = 1939 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KKNLLRL 9 +KN+LRL Sbjct: 1862 RKNILRL 1868>NP_060003 Length = 1939 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KKNLLRL 9 +KN+LRL Sbjct: 1862 RKNILRL 1868>XP_006725317 Length = 1745 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VKKNLLRL 9 V +NLLRL Sbjct: 1244 VARNLLRL 1251>XP_005256707 Length = 1940 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KKNLLRL 9 +KN+LRL Sbjct: 1863 RKNILRL 1869>XP_005256511 Length = 1746 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VKKNLLRL 9 V +NLLRL Sbjct: 1245 VARNLLRL 1252>XP_006718966 Length = 4300 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VKKNLLR 8 +KKNL+R Sbjct: 3829 LKKNLMR 3835>XP_005265408 Length = 716 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 KNLLRL 9 KNLLRL Sbjct: 167 KNLLRL 172>XP_006711533 Length = 747 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VVKKNLLR 8 V+KK LLR Sbjct: 629 VLKKELLR 636>XP_005245422 Length = 1203 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VVKKNLLR 8 V+KK LLR Sbjct: 629 VLKKELLR 636>XP_005245387 Length = 1203 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 KNLLRL 9 KNLLRL Sbjct: 246 KNLLRL 251>XP_005245386 Length = 1518 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 KNLLRL 9 KNLLRL Sbjct: 154 KNLLRL 159>XP_006711512 Length = 1547 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 KNLLRL 9 KNLLRL Sbjct: 246 KNLLRL 251>NP_065821 Length = 1203 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VVKKNLLR 8 V+KK LLR Sbjct: 629 VLKKELLR 636Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.331 0.148 0.365 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 439,515 Number of extensions: 643 Number of successful extensions: 63 Number of sequences better than 10000.0: 63 Number of HSP's gapped: 63 Number of HSP's successfully gapped: 63 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.1 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |