Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005912 20 299 XP_005248577 20 299 XP_005248576 20 299 NP_009054 18 1935 NP_996816 18 1935 NP_064522 18 1935 XP_005272685 18 1935 NP_001129477 17 4312 NP_001129478 17 4312 NP_000810 17 4312 XP_006726907 17 4312 XP_006724053 17 4312 XP_006724052 17 4312 XP_005260998 17 4312 XP_006724051 17 4312 NP_780294 17 4312 NP_072179 16 5631 NP_002881 16 5631 NP_005948 16 5631 NP_877950 16 5631 NP_877953 16 5631 NP_689616 16 5631 NP_001192230 16 5631 NP_002266 16 5631 NP_055685 16 5631 XP_005257402 16 5631 XP_005263520 16 5631 XP_005263519 16 5631 XP_005263518 16 5631 XP_005263517 16 5631 XP_005263515 16 5631 NP_001077090 16 5631 NP_001132914 16 7355 NP_872348 16 7355 XP_005251785 16 7355 XP_005251786 16 7355 XP_006717030 16 7355 XP_006717029 16 7355 NP_612206 16 7355 NP_078951 15 9605 NP_001710 15 9605 NP_060257 15 9605 NP_001077382 15 9605 NP_002228 15 9605 NP_001131147 15 9605 NP_056034 15 9605 NP_001269266 15 9605 NP_001269267 15 9605 NP_001269242 15 9605 NP_001013861 15 9605 NP_001138771 15 9605 NP_001138770 15 9605 NP_001138769 15 9605 NP_004498 15 9605 NP_001165806 15 9605 NP_001129497 15 9605 NP_005023 15 9605 XP_006723849 15 9605 XP_006723848 15 9605 XP_006721852 15 9605 XP_006721851 15 9605 XP_006721850 15 9605 XP_006721849 15 9605 NP_839943 15 9605>NP_005912 Length = 1512 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 VEDTLDGQ 9 VEDTLDGQ Sbjct: 873 VEDTLDGQ 880>XP_005248577 Length = 1349 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 VEDTLDGQ 9 VEDTLDGQ Sbjct: 710 VEDTLDGQ 717>XP_005248576 Length = 1375 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 VEDTLDGQ 9 VEDTLDGQ Sbjct: 736 VEDTLDGQ 743>NP_009054 Length = 1546 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VVEDTLDGQ 9 V+E T+DGQ Sbjct: 164 VIEKTVDGQ 172>NP_996816 Length = 5202 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VVEDTLDGQ 9 V+E T+DGQ Sbjct: 164 VIEKTVDGQ 172>NP_064522 Length = 841 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 VEDTLDGQ 9 V+DT+DGQ Sbjct: 593 VKDTVDGQ 600>XP_005272685 Length = 815 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 VEDTLDGQ 9 V+DT+DGQ Sbjct: 567 VKDTVDGQ 574>NP_001129477 Length = 1010 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VVEDTLDGQ 9 V+E+ LDG+ Sbjct: 188 VIEELLDGE 196>NP_001129478 Length = 1010 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VVEDTLDGQ 9 V+E+ LDG+ Sbjct: 188 VIEELLDGE 196>NP_000810 Length = 1010 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VVEDTLDGQ 9 V+E+ LDG+ Sbjct: 188 VIEELLDGE 196>XP_006726907 Length = 337 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VVEDTLDGQ 9 +V +TLDGQ Sbjct: 286 LVGETLDGQ 294>XP_006724053 Length = 1010 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VVEDTLDGQ 9 V+E+ LDG+ Sbjct: 188 VIEELLDGE 196>XP_006724052 Length = 1010 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VVEDTLDGQ 9 V+E+ LDG+ Sbjct: 188 VIEELLDGE 196>XP_005260998 Length = 1010 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VVEDTLDGQ 9 V+E+ LDG+ Sbjct: 188 VIEELLDGE 196>XP_006724051 Length = 1026 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VVEDTLDGQ 9 V+E+ LDG+ Sbjct: 204 VIEELLDGE 212>NP_780294 Length = 433 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VVEDTLDGQ 9 V+E+ LDG+ Sbjct: 188 VIEELLDGE 196>NP_072179 Length = 870 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VVEDTLDGQ 9 V+ DT+DG+ Sbjct: 272 VLNDTVDGK 280>NP_002881 Length = 1047 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VVEDTLDGQ 9 V+ DT+DG+ Sbjct: 449 VLNDTVDGK 457>NP_005948 Length = 656 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VVEDTLD 7 VVEDTL+ Sbjct: 635 VVEDTLE 641>NP_877950 Length = 775 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VVEDTLDGQ 9 +VED +DG+ Sbjct: 759 LVEDAVDGK 767>NP_877953 Length = 152 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VVEDTLDGQ 9 +VED +DG+ Sbjct: 136 LVEDAVDGK 144>NP_689616 Length = 1009 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VVEDTLDGQ 9 +VED +DG+ Sbjct: 993 LVEDAVDGK 1001>NP_001192230 Length = 1017 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VVEDTLDGQ 9 +VED +DG+ Sbjct: 1001 LVEDAVDGK 1009>NP_002266 Length = 456 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 VEDTLDGQ 9 VE+++DGQ Sbjct: 440 VEESVDGQ 447>NP_055685 Length = 1239 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 VEDTLDG 8 VED LDG Sbjct: 1223 VEDLLDG 1229>XP_005257402 Length = 456 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 VEDTLDGQ 9 VE+++DGQ Sbjct: 440 VEESVDGQ 447>XP_005263520 Length = 574 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VVEDTLD 7 VVEDTL+ Sbjct: 553 VVEDTLE 559>XP_005263519 Length = 656 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VVEDTLD 7 VVEDTL+ Sbjct: 635 VVEDTLE 641>XP_005263518 Length = 656 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VVEDTLD 7 VVEDTL+ Sbjct: 635 VVEDTLE 641>XP_005263517 Length = 656 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VVEDTLD 7 VVEDTL+ Sbjct: 635 VVEDTLE 641>XP_005263515 Length = 697 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VVEDTLD 7 VVEDTL+ Sbjct: 676 VVEDTLE 682>NP_001077090 Length = 1239 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 VEDTLDG 8 VED LDG Sbjct: 1223 VEDLLDG 1229>NP_001132914 Length = 800 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 EDTLDGQ 9 ED LDG+ Sbjct: 596 EDALDGE 602>NP_872348 Length = 696 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 VVEDTLDGQ 9 ++ED+L+G+ Sbjct: 520 ILEDSLEGR 528>XP_005251785 Length = 477 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 EDTLDGQ 9 ED LDG+ Sbjct: 273 EDALDGE 279>XP_005251786 Length = 523 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 EDTLDGQ 9 ED LDG+ Sbjct: 319 EDALDGE 325>XP_006717030 Length = 602 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 EDTLDGQ 9 ED LDG+ Sbjct: 506 EDALDGE 512>XP_006717029 Length = 622 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 EDTLDGQ 9 ED LDG+ Sbjct: 506 EDALDGE 512>NP_612206 Length = 287 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 VVEDTLDG 8 V DTLDG Sbjct: 239 VSSDTLDG 246>NP_078951 Length = 1186 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 DTLDGQ 9 DTLDG+ Sbjct: 360 DTLDGR 365>NP_001710 Length = 431 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 DTLDGQ 9 +TLDGQ Sbjct: 250 ETLDGQ 255>NP_060257 Length = 342 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 VVEDTLDG 8 +++D LDG Sbjct: 272 LIDDALDG 279>NP_001077382 Length = 363 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 VVEDTLDG 8 +++D LDG Sbjct: 293 LIDDALDG 300>NP_002228 Length = 513 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 VVEDTLDG 8 + ED LDG Sbjct: 156 IAEDHLDG 163>NP_001131147 Length = 689 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VVEDTLDGQ 9 VVE +DGQ Sbjct: 302 VVECVVDGQ 310>NP_056034 Length = 653 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 VVEDTLDG 8 +++D LDG Sbjct: 316 LIQDALDG 323>NP_001269266 Length = 617 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VVEDTLDGQ 9 V+ED DGQ Sbjct: 496 VLEDLGDGQ 504>NP_001269267 Length = 585 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VVEDTLDGQ 9 V+ED DGQ Sbjct: 464 VLEDLGDGQ 472>NP_001269242 Length = 656 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 VVEDTLDG 8 +++D LDG Sbjct: 306 LIQDALDG 313>NP_001013861 Length = 684 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 VVEDTLDG 8 +++D LDG Sbjct: 347 LIQDALDG 354>NP_001138771 Length = 707 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 VVEDTLDG 8 +++D LDG Sbjct: 370 LIQDALDG 377>NP_001138770 Length = 676 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 VVEDTLDG 8 +++D LDG Sbjct: 339 LIQDALDG 346>NP_001138769 Length = 735 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 VVEDTLDG 8 +++D LDG Sbjct: 398 LIQDALDG 405>NP_004498 Length = 280 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VVEDTLDGQ 9 V+E LDG+ Sbjct: 181 VIEANLDGE 189>NP_001165806 Length = 603 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VVEDTLDGQ 9 V+ED DGQ Sbjct: 482 VLEDLGDGQ 490>NP_001129497 Length = 630 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VVEDTLDGQ 9 V+ED DGQ Sbjct: 509 VLEDLGDGQ 517>NP_005023 Length = 630 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VVEDTLDGQ 9 V+ED DGQ Sbjct: 509 VLEDLGDGQ 517>XP_006723849 Length = 275 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 VVEDTLDG 8 + ED LDG Sbjct: 156 IAEDHLDG 163>XP_006723848 Length = 513 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 VVEDTLDG 8 + ED LDG Sbjct: 156 IAEDHLDG 163>XP_006721852 Length = 666 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 VVEDTLDG 8 +++D LDG Sbjct: 316 LIQDALDG 323>XP_006721851 Length = 689 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 VVEDTLDG 8 +++D LDG Sbjct: 339 LIQDALDG 346>XP_006721850 Length = 697 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 VVEDTLDG 8 +++D LDG Sbjct: 347 LIQDALDG 354>XP_006721849 Length = 720 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 VVEDTLDG 8 +++D LDG Sbjct: 370 LIQDALDG 377>NP_839943 Length = 1631 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 VVEDTL 6 VVEDTL Sbjct: 222 VVEDTL 227Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.306 0.135 0.355 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 656,955 Number of extensions: 1267 Number of successful extensions: 64 Number of sequences better than 10000.0: 64 Number of HSP's gapped: 64 Number of HSP's successfully gapped: 64 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.3 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |