Cancertope

In silico Platform for designing genome-based
Personalized immunotherapy or Vaccine against Cancer

Blast-Search of mutated query peptide against human proteome

BLAST Search Results
BLASTP 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= User_input
         (9 letters)

Database: HUMAN_PROTEOME_FASTA 
           71,491 sequences; 45,948,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

NP_004251                                                              19     665
NP_060903                                                              18    1135
NP_001140160                                                           18    1135
XP_005272075                                                           18    1135
XP_006712114                                                           18    1135
NP_057688                                                              18    1135
NP_116165                                                              18    1935
NP_001269877                                                           18    1935
XP_005269683                                                           18    1935
XP_005269681                                                           18    1935
XP_006717770                                                           18    1935
XP_005269679                                                           18    1935
NP_001229628                                                           17    4312
XP_005269872                                                           17    4312
XP_006717899                                                           17    4312
XP_006717898                                                           17    4312
NP_001027006                                                           17    4312
NP_001076585                                                           16    5631
NP_005032                                                              16    5631
NP_001009899                                                           16    5631
NP_055616                                                              16    5631
NP_064501                                                              16    5631
NP_001121899                                                           16    5631
NP_001121900                                                           16    5631
XP_005247266                                                           16    5631
XP_005247265                                                           16    5631
XP_005273329                                                           16    5631
NP_148980                                                              16    7355
NP_056990                                                              16    7355
NP_001721                                                              16    7355
NP_001273747                                                           16    7355
NP_776175                                                              16    7355
NP_775859                                                              16    7355
NP_001258558                                                           16    7355
NP_005911                                                              16    7355
NP_001739                                                              16    7355
NP_001139540                                                           16    7355
NP_443139                                                              16    7355
NP_665879                                                              16    7355
XP_005254368                                                           16    7355
XP_005254367                                                           16    7355
XP_006720536                                                           16    7355
XP_006719925                                                           16    7355
XP_005266566                                                           16    7355
XP_005248728                                                           16    7355
XP_006711397                                                           16    7355
XP_006711396                                                           16    7355
XP_006711395                                                           16    7355
XP_005245226                                                           16    7355
XP_005245227                                                           16    7355
XP_006711394                                                           16    7355
XP_006711393                                                           16    7355
XP_005270994                                                           16    7355
XP_005270993                                                           16    7355
NP_057200                                                              16    7355
NP_003283                                                              15    9605
NP_733841                                                              15    9605
NP_004671                                                              15    9605
NP_061172                                                              15    9605
NP_003310                                                              15    9605
NP_001186170                                                           15    9605
NP_597676                                                              15    9605
NP_596870                                                              15    9605
NP_003480                                                              15    9605
NP_001243779                                                           15    9605
NP_596869                                                              15    9605
NP_005307                                                              15    9605
NP_001135779                                                           15    9605
NP_775792                                                              15    9605
NP_758436                                                              15    9605
NP_008922                                                              15    9605
NP_001074020                                                           15    9605
NP_003928                                                              15    9605
NP_001003895                                                           15    9605
NP_004816                                                              15    9605
NP_056167                                                              15    9605
XP_006724117                                                           15    9605
XP_005261123                                                           15    9605
XP_005261122                                                           15    9605
XP_005261120                                                           15    9605
XP_006718271                                                           15    9605
XP_006717040                                                           15    9605
XP_006717039                                                           15    9605
XP_006717038                                                           15    9605
XP_005251795                                                           15    9605
XP_006717037                                                           15    9605
XP_006712978                                                           15    9605
XP_005264840                                                           15    9605
XP_005246888                                                           15    9605
XP_006712788                                                           15    9605
XP_006712787                                                           15    9605
XP_006712786                                                           15    9605
XP_005245528                                                           15    9605
NP_001028170                                                           15    9605
NP_001003894                                                           15    9605
NP_078861                                                              15    9605
NP_653176                                                              15    9605
NP_001001722                                                           15    9605
NP_001254479                                                           15    9605
NP_597681                                                              15    9605
>NP_004251
          Length = 1208

 Score = 19.2 bits (38), Expect =   665
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   VTTNLHLSV 9
           V TNLHLSV
Sbjct: 670 VPTNLHLSV 678
>NP_060903
          Length = 1321

 Score = 18.5 bits (36), Expect =  1135
 Identities = 7/8 (87%), Positives = 7/8 (87%)

Query: 2    TTNLHLSV 9
            TTNLHL V
Sbjct: 1116 TTNLHLDV 1123
>NP_001140160
          Length = 1321

 Score = 18.5 bits (36), Expect =  1135
 Identities = 7/8 (87%), Positives = 7/8 (87%)

Query: 2    TTNLHLSV 9
            TTNLHL V
Sbjct: 1116 TTNLHLDV 1123
>XP_005272075
          Length = 1561

 Score = 18.5 bits (36), Expect =  1135
 Identities = 7/8 (87%), Positives = 7/8 (87%)

Query: 2    TTNLHLSV 9
            TTNLHL V
Sbjct: 1356 TTNLHLDV 1363
>XP_006712114
          Length = 661

 Score = 18.5 bits (36), Expect =  1135
 Identities = 7/8 (87%), Positives = 7/8 (87%)

Query: 2   TTNLHLSV 9
           TTNLHL V
Sbjct: 456 TTNLHLDV 463
>NP_057688
          Length = 1761

 Score = 18.5 bits (36), Expect =  1135
 Identities = 7/8 (87%), Positives = 7/8 (87%)

Query: 2    TTNLHLSV 9
            TTNLHL V
Sbjct: 1556 TTNLHLDV 1563
>NP_116165
          Length = 2540

 Score = 17.7 bits (34), Expect =  1935
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2    TTNLHLSV 9
            TTNLH+ V
Sbjct: 2332 TTNLHIEV 2339
>NP_001269877
          Length = 2358

 Score = 17.7 bits (34), Expect =  1935
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2    TTNLHLSV 9
            TTNLH+ V
Sbjct: 2150 TTNLHIEV 2157
>XP_005269683
          Length = 2252

 Score = 17.7 bits (34), Expect =  1935
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2    TTNLHLSV 9
            TTNLH+ V
Sbjct: 2044 TTNLHIEV 2051
>XP_005269681
          Length = 2321

 Score = 17.7 bits (34), Expect =  1935
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2    TTNLHLSV 9
            TTNLH+ V
Sbjct: 2113 TTNLHIEV 2120
>XP_006717770
          Length = 2358

 Score = 17.7 bits (34), Expect =  1935
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2    TTNLHLSV 9
            TTNLH+ V
Sbjct: 2150 TTNLHIEV 2157
>XP_005269679
          Length = 2502

 Score = 17.7 bits (34), Expect =  1935
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2    TTNLHLSV 9
            TTNLH+ V
Sbjct: 2294 TTNLHIEV 2301
>NP_001229628
          Length = 625

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   TNLHLSV 9
           TNLHL++
Sbjct: 389 TNLHLAI 395
>XP_005269872
          Length = 423

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   TNLHLSV 9
           TNLHL++
Sbjct: 389 TNLHLAI 395
>XP_006717899
          Length = 582

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   TNLHLSV 9
           TNLHL++
Sbjct: 346 TNLHLAI 352
>XP_006717898
          Length = 598

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   TNLHLSV 9
           TNLHL++
Sbjct: 389 TNLHLAI 395
>NP_001027006
          Length = 1149

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 3   TNLHLS 8
           TNLHLS
Sbjct: 887 TNLHLS 892
>NP_001076585
          Length = 555

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2   TTNLHLSV 9
           T+N+H+SV
Sbjct: 140 TSNVHVSV 147
>NP_005032
          Length = 555

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2   TTNLHLSV 9
           T+N+H+SV
Sbjct: 140 TSNVHVSV 147
>NP_001009899
          Length = 2245

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1    VTTNLH 6
            VTTN+H
Sbjct: 1939 VTTNMH 1944
>NP_055616
          Length = 2137

 Score = 16.2 bits (30), Expect =  5631
 Identities = 7/9 (77%), Positives = 7/9 (77%)

Query: 1    VTTNLHLSV 9
            VTT  HLSV
Sbjct: 2001 VTTTGHLSV 2009
>NP_064501
          Length = 847

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   VTTNLHLS 8
           + TNLH+S
Sbjct: 733 IYTNLHIS 740
>NP_001121899
          Length = 846

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   VTTNLHLS 8
           + TNLH+S
Sbjct: 732 IYTNLHIS 739
>NP_001121900
          Length = 837

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   VTTNLHLS 8
           + TNLH+S
Sbjct: 723 IYTNLHIS 730
>XP_005247266
          Length = 2189

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1    VTTNLH 6
            VTTN+H
Sbjct: 1883 VTTNMH 1888
>XP_005247265
          Length = 2211

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1    VTTNLH 6
            VTTN+H
Sbjct: 1905 VTTNMH 1910
>XP_005273329
          Length = 1934

 Score = 16.2 bits (30), Expect =  5631
 Identities = 7/9 (77%), Positives = 7/9 (77%)

Query: 1    VTTNLHLSV 9
            VTT  HLSV
Sbjct: 1798 VTTTGHLSV 1806
>NP_148980
          Length = 1110

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1   VTTNLHL 7
           ++TNLHL
Sbjct: 818 LSTNLHL 824
>NP_056990
          Length = 1127

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1   VTTNLHL 7
           ++TNLHL
Sbjct: 818 LSTNLHL 824
>NP_001721
          Length = 457

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2   TTNLHLSV 9
           T +LHLSV
Sbjct: 214 TPDLHLSV 221
>NP_001273747
          Length = 366

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2   TTNLHLSV 9
           T +LHLSV
Sbjct: 123 TPDLHLSV 130
>NP_776175
          Length = 1150

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   VTTNLHLSV 9
           +TT+LH +V
Sbjct: 244 ITTSLHQTV 252
>NP_775859
          Length = 1326

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 2   TTNLHLSV 9
           T  LHLSV
Sbjct: 690 TATLHLSV 697
>NP_001258558
          Length = 514

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   VTTNLHLSV 9
           VTT+ H+S+
Sbjct: 423 VTTHPHISI 431
>NP_005911
          Length = 521

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   VTTNLHLSV 9
           VTT+ H+S+
Sbjct: 430 VTTHPHISI 438
>NP_001739
          Length = 700

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3   TNLHLS 8
           TN+HLS
Sbjct: 444 TNIHLS 449
>NP_001139540
          Length = 622

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3   TNLHLS 8
           TN+HLS
Sbjct: 366 TNIHLS 371
>NP_443139
          Length = 1078

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3  TNLHLS 8
          TNLH+S
Sbjct: 40 TNLHIS 45
>NP_665879
          Length = 349

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 3  TNLHLSV 9
          T LHLSV
Sbjct: 77 TGLHLSV 83
>XP_005254368
          Length = 712

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   VTTNLHLSV 9
           +TT+LH +V
Sbjct: 244 ITTSLHQTV 252
>XP_005254367
          Length = 1031

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   VTTNLHLSV 9
           +TT+LH +V
Sbjct: 125 ITTSLHQTV 133
>XP_006720536
          Length = 1072

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   VTTNLHLSV 9
           +TT+LH +V
Sbjct: 166 ITTSLHQTV 174
>XP_006719925
          Length = 366

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2   TTNLHLSV 9
           T +LHLSV
Sbjct: 123 TPDLHLSV 130
>XP_005266566
          Length = 366

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2   TTNLHLSV 9
           T +LHLSV
Sbjct: 123 TPDLHLSV 130
>XP_005248728
          Length = 610

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   VTTNLHLSV 9
           + TN HLSV
Sbjct: 601 LVTNEHLSV 609
>XP_006711397
          Length = 513

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   VTTNLHLSV 9
           VTT+ H+S+
Sbjct: 422 VTTHPHISI 430
>XP_006711396
          Length = 514

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   VTTNLHLSV 9
           VTT+ H+S+
Sbjct: 423 VTTHPHISI 431
>XP_006711395
          Length = 520

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   VTTNLHLSV 9
           VTT+ H+S+
Sbjct: 429 VTTHPHISI 437
>XP_005245226
          Length = 521

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   VTTNLHLSV 9
           VTT+ H+S+
Sbjct: 430 VTTHPHISI 438
>XP_005245227
          Length = 521

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   VTTNLHLSV 9
           VTT+ H+S+
Sbjct: 430 VTTHPHISI 438
>XP_006711394
          Length = 521

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   VTTNLHLSV 9
           VTT+ H+S+
Sbjct: 430 VTTHPHISI 438
>XP_006711393
          Length = 521

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   VTTNLHLSV 9
           VTT+ H+S+
Sbjct: 430 VTTHPHISI 438
>XP_005270994
          Length = 1134

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1   VTTNLHL 7
           ++TNLHL
Sbjct: 842 LSTNLHL 848
>XP_005270993
          Length = 1151

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1   VTTNLHL 7
           ++TNLHL
Sbjct: 842 LSTNLHL 848
>NP_057200
          Length = 426

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 3  TNLHLSV 9
          T LHLSV
Sbjct: 77 TGLHLSV 83
>NP_003283
          Length = 2363

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3   TNLHLS 8
           TNLHL+
Sbjct: 884 TNLHLN 889
>NP_733841
          Length = 540

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   TTNLHLSV 9
           TT++H SV
Sbjct: 240 TTDMHTSV 247
>NP_004671
          Length = 554

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   TTNLHLSV 9
           TT++H SV
Sbjct: 240 TTDMHTSV 247
>NP_061172
          Length = 739

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   VTTNLHLS 8
           +TT+LH S
Sbjct: 501 ITTDLHSS 508
>NP_003310
          Length = 26926

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1     VTTNLHLS 8
             VTT  HLS
Sbjct: 25712 VTTTQHLS 25719
>NP_001186170
          Length = 465

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   VTTNLHL 7
           +T NLHL
Sbjct: 137 LTVNLHL 143
>NP_597676
          Length = 27051

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1     VTTNLHLS 8
             VTT  HLS
Sbjct: 25837 VTTTQHLS 25844
>NP_596870
          Length = 5604

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/8 (50%), Positives = 7/8 (87%)

Query: 1    VTTNLHLS 8
            ++TN+H S
Sbjct: 4847 ISTNIHAS 4854
>NP_003480
          Length = 1158

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3   TNLHLS 8
           TN+HLS
Sbjct: 768 TNVHLS 773
>NP_001243779
          Length = 34350

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1     VTTNLHLS 8
             VTT  HLS
Sbjct: 33136 VTTTQHLS 33143
>NP_596869
          Length = 33423

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1     VTTNLHLS 8
             VTT  HLS
Sbjct: 32209 VTTTQHLS 32216
>NP_005307
          Length = 548

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 5/7 (71%)

Query: 2  TTNLHLS 8
          TTN H S
Sbjct: 74 TTNFHFS 80
>NP_001135779
          Length = 548

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 5/7 (71%)

Query: 2  TTNLHLS 8
          TTN H S
Sbjct: 74 TTNFHFS 80
>NP_775792
          Length = 1444

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   TTNLHLSV 9
           +TN HLS+
Sbjct: 427 STNAHLSL 434
>NP_758436
          Length = 194

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3  TNLHLS 8
          TNLH+S
Sbjct: 81 TNLHVS 86
>NP_008922
          Length = 1029

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2    TTNLHL 7
            T+NLHL
Sbjct: 998  TSNLHL 1003
>NP_001074020
          Length = 1405

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   TTNLHLSV 9
           +TN HLS+
Sbjct: 388 STNAHLSL 395
>NP_003928
          Length = 465

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   VTTNLHL 7
           +T NLHL
Sbjct: 137 LTVNLHL 143
>NP_001003895
          Length = 554

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   TTNLHLSV 9
           TT++H SV
Sbjct: 240 TTDMHTSV 247
>NP_004816
          Length = 541

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   TTNLHLSV 9
           TT++H SV
Sbjct: 241 TTDMHTSV 248
>NP_056167
          Length = 388

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3  TNLHLS 8
          TNLH+S
Sbjct: 81 TNLHVS 86
>XP_006724117
          Length = 1158

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3   TNLHLS 8
           TN+HLS
Sbjct: 768 TNVHLS 773
>XP_005261123
          Length = 1158

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3   TNLHLS 8
           TN+HLS
Sbjct: 768 TNVHLS 773
>XP_005261122
          Length = 1158

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3   TNLHLS 8
           TN+HLS
Sbjct: 768 TNVHLS 773
>XP_005261120
          Length = 1158

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3   TNLHLS 8
           TN+HLS
Sbjct: 768 TNVHLS 773
>XP_006718271
          Length = 548

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 5/7 (71%)

Query: 2  TTNLHLS 8
          TTN H S
Sbjct: 74 TTNFHFS 80
>XP_006717040
          Length = 1113

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   TTNLHLSV 9
           +TN HLS+
Sbjct: 491 STNAHLSL 498
>XP_006717039
          Length = 1370

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   TTNLHLSV 9
           +TN HLS+
Sbjct: 388 STNAHLSL 395
>XP_006717038
          Length = 1473

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   TTNLHLSV 9
           +TN HLS+
Sbjct: 491 STNAHLSL 498
>XP_005251795
          Length = 1508

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   TTNLHLSV 9
           +TN HLS+
Sbjct: 491 STNAHLSL 498
>XP_006717037
          Length = 1508

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   TTNLHLSV 9
           +TN HLS+
Sbjct: 491 STNAHLSL 498
>XP_006712978
          Length = 826

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   TTNLHL 7
           T+NLHL
Sbjct: 795 TSNLHL 800
>XP_005264840
          Length = 1029

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2    TTNLHL 7
            T+NLHL
Sbjct: 998  TSNLHL 1003
>XP_005246888
          Length = 22663

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1     VTTNLHLS 8
             VTT  HLS
Sbjct: 21449 VTTTQHLS 21456
>XP_006712788
          Length = 24022

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1     VTTNLHLS 8
             VTT  HLS
Sbjct: 22808 VTTTQHLS 22815
>XP_006712787
          Length = 33978

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1     VTTNLHLS 8
             VTT  HLS
Sbjct: 32764 VTTTQHLS 32771
>XP_006712786
          Length = 35484

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1     VTTNLHLS 8
             VTT  HLS
Sbjct: 34270 VTTTQHLS 34277
>XP_005245528
          Length = 2439

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3   TNLHLS 8
           TNLHL+
Sbjct: 960 TNLHLN 965
>NP_001028170
          Length = 307

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   VTTNLHL 7
           +T NLHL
Sbjct: 137 LTVNLHL 143
>NP_001003894
          Length = 540

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   TTNLHLSV 9
           TT++H SV
Sbjct: 240 TTDMHTSV 247
>NP_078861
          Length = 198

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   VTTNLHLS 8
           +TT +HLS
Sbjct: 119 ITTLMHLS 126
>NP_653176
          Length = 669

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   VTTNLHL 7
           V TN+HL
Sbjct: 199 VITNIHL 205
>NP_001001722
          Length = 541

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   TTNLHLSV 9
           TT++H SV
Sbjct: 241 TTDMHTSV 248
>NP_001254479
          Length = 35991

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1     VTTNLHLS 8
             VTT  HLS
Sbjct: 34777 VTTTQHLS 34784
>NP_597681
          Length = 27118

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1     VTTNLHLS 8
             VTT  HLS
Sbjct: 25904 VTTTQHLS 25911
  Database: HUMAN_PROTEOME_FASTA
    Posted date:  May 26, 2014 10:46 AM
  Number of letters in database: 45,948,801
  Number of sequences in database:  71,491
  
Lambda     K      H
   0.317    0.124    0.331 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 71491
Number of Hits to DB: 550,117
Number of extensions: 806
Number of successful extensions: 100
Number of sequences better than 10000.0: 100
Number of HSP's gapped: 100
Number of HSP's successfully gapped: 100
Length of query: 9
Length of database: 45,948,801
Length adjustment: 0
Effective length of query: 9
Effective length of database: 45,948,801
Effective search space: 413539209
Effective search space used: 413539209
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 28 (15.8 bits)
S2: 28 (15.4 bits)

CANCERTOPE    |     Raghava's Group    |     IMTECH    |     CSIR    |     CRDD    |     GPSR Package