Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000213 19 869 NP_001087241 19 869 XP_006714101 19 869 XP_005265799 19 869 XP_005265798 19 869 XP_005265797 19 869 NP_055068 17 3301 NP_001156750 17 3301 NP_001156751 17 3301 XP_006724788 17 3301 NP_001275644 17 4312 NP_001275645 17 4312 NP_001323 17 4312 XP_005248310 17 4312 XP_005248309 17 4312 XP_005248308 17 4312 NP_001092286 16 5631 NP_056484 16 5631 XP_006718561 16 5631 NP_003669 16 7355 NP_001002878 16 7355 NP_001002879 16 7355 NP_001002877 16 7355 NP_065923 16 7355 XP_005261858 16 7355 XP_005261857 16 7355 XP_005261856 16 7355 XP_006724410 16 7355 XP_005261855 16 7355 XP_005261854 16 7355 XP_005264816 16 7355 XP_005264815 16 7355 XP_005264814 16 7355 XP_005265204 16 7355 XP_006713221 16 7355 XP_006713220 16 7355 XP_006713219 16 7355 XP_006713218 16 7355 XP_006713217 16 7355 XP_005265196 16 7355 XP_005265195 16 7355 XP_006713216 16 7355 XP_006713215 16 7355 XP_006713214 16 7355 XP_006713213 16 7355 XP_005265192 16 7355 XP_005265191 16 7355 XP_005265190 16 7355 XP_006713212 16 7355 XP_006713211 16 7355 XP_006713210 16 7355 XP_006713209 16 7355 XP_006713208 16 7355 XP_006713207 16 7355 XP_006713206 16 7355 XP_006713205 16 7355 XP_006713204 16 7355 XP_006713203 16 7355>NP_000213 Length = 976 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VTTALEVVD 9 VTT LEVVD Sbjct: 301 VTTTLEVVD 309>NP_001087241 Length = 972 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VTTALEVVD 9 VTT LEVVD Sbjct: 301 VTTTLEVVD 309>XP_006714101 Length = 526 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VTTALEVVD 9 VTT LEVVD Sbjct: 302 VTTTLEVVD 310>XP_005265799 Length = 973 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VTTALEVVD 9 VTT LEVVD Sbjct: 302 VTTTLEVVD 310>XP_005265798 Length = 976 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VTTALEVVD 9 VTT LEVVD Sbjct: 302 VTTTLEVVD 310>XP_005265797 Length = 977 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VTTALEVVD 9 VTT LEVVD Sbjct: 302 VTTTLEVVD 310>NP_055068 Length = 2725 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 VTTALEVVD 9 +TTA+E++D Sbjct: 522 LTTAIEIMD 530>NP_001156750 Length = 2732 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 VTTALEVVD 9 +TTA+E++D Sbjct: 522 LTTAIEIMD 530>NP_001156751 Length = 2731 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 VTTALEVVD 9 +TTA+E++D Sbjct: 521 LTTAIEIMD 529>XP_006724788 Length = 2570 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 VTTALEVVD 9 +TTA+E++D Sbjct: 368 LTTAIEIMD 376>NP_001275644 Length = 1134 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VTTALEVVD 9 +TT LE+VD Sbjct: 26 LTTGLELVD 34>NP_001275645 Length = 888 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VTTALEVVD 9 +TT LE+VD Sbjct: 26 LTTGLELVD 34>NP_001323 Length = 1225 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VTTALEVVD 9 +TT LE+VD Sbjct: 117 LTTGLELVD 125>XP_005248310 Length = 1159 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VTTALEVVD 9 +TT LE+VD Sbjct: 26 LTTGLELVD 34>XP_005248309 Length = 1236 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VTTALEVVD 9 +TT LE+VD Sbjct: 103 LTTGLELVD 111>XP_005248308 Length = 1250 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VTTALEVVD 9 +TT LE+VD Sbjct: 117 LTTGLELVD 125>NP_001092286 Length = 2769 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VTTALEVVD 9 +TTA+E VD Sbjct: 556 LTTAIESVD 564>NP_056484 Length = 795 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TTALEVVD 9 T A+EVVD Sbjct: 331 TVAIEVVD 338>XP_006718561 Length = 2794 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VTTALEVVD 9 +TTA+E VD Sbjct: 581 LTTAIESVD 589>NP_003669 Length = 683 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 VTTALEVV 8 VTTA+E++ Sbjct: 379 VTTAMELI 386>NP_001002878 Length = 683 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 VTTALEVV 8 VTTA+E++ Sbjct: 379 VTTAMELI 386>NP_001002879 Length = 683 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 VTTALEVV 8 VTTA+E++ Sbjct: 379 VTTAMELI 386>NP_001002877 Length = 683 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 VTTALEVV 8 VTTA+E++ Sbjct: 379 VTTAMELI 386>NP_065923 Length = 1028 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VTTALEVVD 9 VTT EV+D Sbjct: 646 VTTVPEVID 654>XP_005261858 Length = 344 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 VTTALEVV 8 VTTA+E++ Sbjct: 40 VTTAMELI 47>XP_005261857 Length = 410 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 VTTALEVV 8 VTTA+E++ Sbjct: 106 VTTAMELI 113>XP_005261856 Length = 694 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 VTTALEVV 8 VTTA+E++ Sbjct: 390 VTTAMELI 397>XP_006724410 Length = 694 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 VTTALEVV 8 VTTA+E++ Sbjct: 390 VTTAMELI 397>XP_005261855 Length = 694 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 VTTALEVV 8 VTTA+E++ Sbjct: 390 VTTAMELI 397>XP_005261854 Length = 694 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 VTTALEVV 8 VTTA+E++ Sbjct: 390 VTTAMELI 397>XP_005264816 Length = 647 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VTTALEVVD 9 VTT EV+D Sbjct: 265 VTTVPEVID 273>XP_005264815 Length = 923 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VTTALEVVD 9 VTT EV+D Sbjct: 541 VTTVPEVID 549>XP_005264814 Length = 1028 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VTTALEVVD 9 VTT EV+D Sbjct: 646 VTTVPEVID 654>XP_005265204 Length = 2256 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VTTALEVVD 9 +TTA+E V+ Sbjct: 1471 ITTAIETVN 1479>XP_006713221 Length = 2268 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VTTALEVVD 9 +TTA+E V+ Sbjct: 1567 ITTAIETVN 1575>XP_006713220 Length = 2274 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VTTALEVVD 9 +TTA+E V+ Sbjct: 1489 ITTAIETVN 1497>XP_006713219 Length = 2280 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VTTALEVVD 9 +TTA+E V+ Sbjct: 1567 ITTAIETVN 1575>XP_006713218 Length = 2282 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VTTALEVVD 9 +TTA+E V+ Sbjct: 1497 ITTAIETVN 1505>XP_006713217 Length = 2283 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VTTALEVVD 9 +TTA+E V+ Sbjct: 1567 ITTAIETVN 1575>XP_005265196 Length = 2297 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VTTALEVVD 9 +TTA+E V+ Sbjct: 1512 ITTAIETVN 1520>XP_005265195 Length = 2297 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VTTALEVVD 9 +TTA+E V+ Sbjct: 1512 ITTAIETVN 1520>XP_006713216 Length = 2300 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VTTALEVVD 9 +TTA+E V+ Sbjct: 1515 ITTAIETVN 1523>XP_006713215 Length = 2309 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VTTALEVVD 9 +TTA+E V+ Sbjct: 1524 ITTAIETVN 1532>XP_006713214 Length = 2311 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VTTALEVVD 9 +TTA+E V+ Sbjct: 1526 ITTAIETVN 1534>XP_006713213 Length = 2314 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VTTALEVVD 9 +TTA+E V+ Sbjct: 1567 ITTAIETVN 1575>XP_005265192 Length = 2314 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VTTALEVVD 9 +TTA+E V+ Sbjct: 1529 ITTAIETVN 1537>XP_005265191 Length = 2314 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VTTALEVVD 9 +TTA+E V+ Sbjct: 1529 ITTAIETVN 1537>XP_005265190 Length = 2314 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VTTALEVVD 9 +TTA+E V+ Sbjct: 1529 ITTAIETVN 1537>XP_006713212 Length = 2320 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VTTALEVVD 9 +TTA+E V+ Sbjct: 1567 ITTAIETVN 1575>XP_006713211 Length = 2323 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VTTALEVVD 9 +TTA+E V+ Sbjct: 1538 ITTAIETVN 1546>XP_006713210 Length = 2326 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VTTALEVVD 9 +TTA+E V+ Sbjct: 1541 ITTAIETVN 1549>XP_006713209 Length = 2326 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VTTALEVVD 9 +TTA+E V+ Sbjct: 1541 ITTAIETVN 1549>XP_006713208 Length = 2335 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VTTALEVVD 9 +TTA+E V+ Sbjct: 1567 ITTAIETVN 1575>XP_006713207 Length = 2335 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VTTALEVVD 9 +TTA+E V+ Sbjct: 1550 ITTAIETVN 1558>XP_006713206 Length = 2337 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VTTALEVVD 9 +TTA+E V+ Sbjct: 1567 ITTAIETVN 1575>XP_006713205 Length = 2340 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VTTALEVVD 9 +TTA+E V+ Sbjct: 1555 ITTAIETVN 1563>XP_006713204 Length = 2351 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VTTALEVVD 9 +TTA+E V+ Sbjct: 1567 ITTAIETVN 1575>XP_006713203 Length = 2352 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VTTALEVVD 9 +TTA+E V+ Sbjct: 1567 ITTAIETVN 1575Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.311 0.125 0.299 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 267,179 Number of extensions: 209 Number of successful extensions: 58 Number of sequences better than 10000.0: 58 Number of HSP's gapped: 58 Number of HSP's successfully gapped: 58 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |