Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001136098 19 869 NP_000360 19 869 NP_001018046 19 869 XP_005268096 19 869 XP_006720308 19 869 XP_005268094 19 869 NP_064599 17 3301 XP_005254616 17 3301 XP_005254615 17 3301 XP_005254614 17 3301 NP_570124 17 4312 NP_945119 17 4312 NP_005329 17 4312 NP_064595 17 4312 XP_005254887 17 4312 XP_005250362 17 4312 XP_005250361 17 4312 XP_006715913 17 4312 NP_065433 16 7355 NP_001009921 16 7355 NP_001157888 16 7355 XP_006724703 16 7355 XP_006713619 16 7355 XP_005247310 16 7355 XP_005247308 16 7355 NP_056118 16 7355 NP_006266 15 9605 NP_001578 15 9605 NP_000267 15 9605 NP_001161842 15 9605 NP_001074260 15 9605 NP_055595 15 9605 NP_001276061 15 9605 NP_443081 15 9605 NP_060720 15 9605 NP_066552 15 9605 NP_006769 15 9605 NP_001166033 15 9605 NP_005984 15 9605 NP_001074261 15 9605 XP_005262479 15 9605 XP_005262478 15 9605 XP_006724824 15 9605 XP_006724823 15 9605 XP_005256462 15 9605 XP_006722355 15 9605 XP_005256461 15 9605 XP_005256460 15 9605 XP_005256459 15 9605 XP_005256457 15 9605 XP_005256458 15 9605 XP_006722354 15 9605 XP_005256456 15 9605 XP_006722353 15 9605 XP_005256453 15 9605 XP_005273625 15 9605 XP_006716420 15 9605 XP_006716419 15 9605 XP_006715348 15 9605 XP_005249560 15 9605 NP_001138631 15 9605>NP_001136098 Length = 274 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VTSKDIQRI 9 VT KDIQRI Sbjct: 39 VTCKDIQRI 47>NP_000360 Length = 764 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VTSKDIQRI 9 VT KDIQRI Sbjct: 39 VTCKDIQRI 47>NP_001018046 Length = 253 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VTSKDIQRI 9 VT KDIQRI Sbjct: 39 VTCKDIQRI 47>XP_005268096 Length = 253 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VTSKDIQRI 9 VT KDIQRI Sbjct: 39 VTCKDIQRI 47>XP_006720308 Length = 274 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VTSKDIQRI 9 VT KDIQRI Sbjct: 39 VTCKDIQRI 47>XP_005268094 Length = 764 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VTSKDIQRI 9 VT KDIQRI Sbjct: 39 VTCKDIQRI 47>NP_064599 Length = 630 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 VTSKDIQR 8 +TSKD+Q+ Sbjct: 570 ITSKDLQK 577>XP_005254616 Length = 610 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 VTSKDIQR 8 +TSKD+Q+ Sbjct: 550 ITSKDLQK 557>XP_005254615 Length = 611 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 VTSKDIQR 8 +TSKD+Q+ Sbjct: 551 ITSKDLQK 558>XP_005254614 Length = 631 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 VTSKDIQR 8 +TSKD+Q+ Sbjct: 571 ITSKDLQK 578>NP_570124 Length = 475 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VTSKDIQRI 9 +TSKD Q+I Sbjct: 318 ITSKDQQKI 326>NP_945119 Length = 837 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TSKDIQRI 9 T KD+QR+ Sbjct: 362 TMKDVQRV 369>NP_005329 Length = 1037 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VTSKDIQR 8 V SKD+QR Sbjct: 839 VASKDLQR 846>NP_064595 Length = 837 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TSKDIQRI 9 T KD+QR+ Sbjct: 362 TMKDVQRV 369>XP_005254887 Length = 977 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TSKDIQRI 9 T KD+QR+ Sbjct: 502 TMKDVQRV 509>XP_005250362 Length = 1003 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VTSKDIQR 8 V SKD+QR Sbjct: 805 VASKDLQR 812>XP_005250361 Length = 1008 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VTSKDIQR 8 V SKD+QR Sbjct: 810 VASKDLQR 817>XP_006715913 Length = 267 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VTSKDIQRI 9 +TSKD Q+I Sbjct: 110 ITSKDQQKI 118>NP_065433 Length = 1091 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 SKDIQRI 9 S+DIQRI Sbjct: 573 SEDIQRI 579>NP_001009921 Length = 1428 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VTSKDIQRI 9 +TS DIQ++ Sbjct: 661 ITSLDIQQV 669>NP_001157888 Length = 154 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VTSKDIQ 7 +TS+DIQ Sbjct: 112 ITSRDIQ 118>XP_006724703 Length = 154 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VTSKDIQ 7 +TS+DIQ Sbjct: 112 ITSRDIQ 118>XP_006713619 Length = 856 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VTSKDIQRI 9 +TS DIQ++ Sbjct: 89 ITSLDIQQV 97>XP_005247310 Length = 1035 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VTSKDIQRI 9 +TS DIQ++ Sbjct: 661 ITSLDIQQV 669>XP_005247308 Length = 1428 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VTSKDIQRI 9 +TS DIQ++ Sbjct: 661 ITSLDIQQV 669>NP_056118 Length = 1426 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VTSKDIQRI 9 +TS DIQ++ Sbjct: 659 ITSLDIQQV 667>NP_006266 Length = 344 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 VTSKDIQR 8 V KDIQR Sbjct: 13 VREKDIQR 20>NP_001578 Length = 893 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 VTSKDIQRI 9 + KD+QR+ Sbjct: 439 INKKDLQRL 447>NP_000267 Length = 901 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 VTSKDIQRI 9 + KD+QR+ Sbjct: 439 INKKDLQRL 447>NP_001161842 Length = 1782 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 TSKDIQR 8 TSK++QR Sbjct: 1394 TSKELQR 1400>NP_001074260 Length = 194 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VTSKDIQR 8 VTSKD+ R Sbjct: 104 VTSKDMLR 111>NP_055595 Length = 1698 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 TSKDIQR 8 TSK++QR Sbjct: 1310 TSKELQR 1316>NP_001276061 Length = 134 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VTSKDIQR 8 VTSKD+ R Sbjct: 95 VTSKDMLR 102>NP_443081 Length = 185 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VTSKDIQR 8 VTSKD+ R Sbjct: 95 VTSKDMLR 102>NP_060720 Length = 658 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SKDIQRI 9 +KDIQR+ Sbjct: 158 NKDIQRL 164>NP_066552 Length = 249 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VTSKDIQRI 9 +T+KDI+ I Sbjct: 196 LTAKDIEEI 204>NP_006769 Length = 481 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VTSKDIQR 8 V S+D+QR Sbjct: 383 VVSEDVQR 390>NP_001166033 Length = 634 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SKDIQRI 9 +KDIQR+ Sbjct: 134 NKDIQRL 140>NP_005984 Length = 1192 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SKDIQRI 9 SKDIQ++ Sbjct: 1082 SKDIQKL 1088>NP_001074261 Length = 185 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VTSKDIQR 8 VTSKD+ R Sbjct: 95 VTSKDMLR 102>XP_005262479 Length = 744 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 VTSKDIQRI 9 + KD+QR+ Sbjct: 282 INKKDLQRL 290>XP_005262478 Length = 835 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 VTSKDIQRI 9 + KD+QR+ Sbjct: 373 INKKDLQRL 381>XP_006724824 Length = 890 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 VTSKDIQRI 9 + KD+QR+ Sbjct: 436 INKKDLQRL 444>XP_006724823 Length = 898 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 VTSKDIQRI 9 + KD+QR+ Sbjct: 436 INKKDLQRL 444>XP_005256462 Length = 630 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SKDIQRI 9 SKDIQ++ Sbjct: 520 SKDIQKL 526>XP_006722355 Length = 630 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SKDIQRI 9 SKDIQ++ Sbjct: 520 SKDIQKL 526>XP_005256461 Length = 630 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SKDIQRI 9 SKDIQ++ Sbjct: 520 SKDIQKL 526>XP_005256460 Length = 630 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SKDIQRI 9 SKDIQ++ Sbjct: 520 SKDIQKL 526>XP_005256459 Length = 630 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SKDIQRI 9 SKDIQ++ Sbjct: 520 SKDIQKL 526>XP_005256457 Length = 630 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SKDIQRI 9 SKDIQ++ Sbjct: 520 SKDIQKL 526>XP_005256458 Length = 630 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SKDIQRI 9 SKDIQ++ Sbjct: 520 SKDIQKL 526>XP_006722354 Length = 760 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SKDIQRI 9 SKDIQ++ Sbjct: 650 SKDIQKL 656>XP_005256456 Length = 764 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SKDIQRI 9 SKDIQ++ Sbjct: 654 SKDIQKL 660>XP_006722353 Length = 1165 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SKDIQRI 9 SKDIQ++ Sbjct: 1055 SKDIQKL 1061>XP_005256453 Length = 1175 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SKDIQRI 9 SKDIQ++ Sbjct: 1065 SKDIQKL 1071>XP_005273625 Length = 427 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SKDIQRI 9 +KDIQR+ Sbjct: 158 NKDIQRL 164>XP_006716420 Length = 646 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SKDIQRI 9 +KDIQR+ Sbjct: 158 NKDIQRL 164>XP_006716419 Length = 676 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SKDIQRI 9 +KDIQR+ Sbjct: 158 NKDIQRL 164>XP_006715348 Length = 1734 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 TSKDIQR 8 TSK++QR Sbjct: 1342 TSKELQR 1348>XP_005249560 Length = 1750 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 TSKDIQR 8 TSK++QR Sbjct: 1362 TSKELQR 1368>NP_001138631 Length = 637 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SKDIQRI 9 +KDIQR+ Sbjct: 137 NKDIQRL 143Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.319 0.132 0.320 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 458,264 Number of extensions: 496 Number of successful extensions: 61 Number of sequences better than 10000.0: 61 Number of HSP's gapped: 61 Number of HSP's successfully gapped: 61 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |