Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_008835 20 390 NP_001075109 20 390 NP_127493 15 9605 NP_127494 15 9605 NP_001157108 15 9605 NP_001509 15 9605 NP_127492 15 9605 NP_066554 15 9605 NP_061875 15 9605 NP_001265536 15 9605 NP_055239 15 9605 NP_001265537 15 9605 NP_001265535 15 9605 NP_853514 15 9605 NP_001186 15 9605 XP_005261676 15 9605 XP_006724320 15 9605 XP_006719760 15 9605 XP_006719759 15 9605 XP_006719758 15 9605 XP_005254048 15 9605 XP_006719757 15 9605 XP_005250353 15 9605 XP_006716008 15 9605 XP_006716007 15 9605 XP_006716006 15 9605 XP_006716005 15 9605 XP_006716004 15 9605 XP_006716003 15 9605 XP_006716002 15 9605 XP_005250348 15 9605 XP_005264435 15 9605 XP_005264434 15 9605 XP_005264433 15 9605 XP_005264432 15 9605 XP_005264431 15 9605 NP_001155177 15 9605 NP_997194 15 9605>NP_008835 Length = 4128 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 VTSAVREPK 9 +TSAVREPK Sbjct: 208 MTSAVREPK 216>NP_001075109 Length = 4097 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 VTSAVREPK 9 +TSAVREPK Sbjct: 208 MTSAVREPK 216>NP_127493 Length = 978 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 TSAVREP 8 TSAVR P Sbjct: 678 TSAVRTP 684>NP_127494 Length = 977 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 TSAVREP 8 TSAVR P Sbjct: 677 TSAVRTP 683>NP_001157108 Length = 976 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 TSAVREP 8 TSAVR P Sbjct: 676 TSAVRTP 682>NP_001509 Length = 957 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 TSAVREP 8 TSAVR P Sbjct: 657 TSAVRTP 663>NP_127492 Length = 998 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 TSAVREP 8 TSAVR P Sbjct: 698 TSAVRTP 704>NP_066554 Length = 1020 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VTSAVRE 7 VTSA+RE Sbjct: 267 VTSALRE 273>NP_061875 Length = 926 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VTSAVREPK 9 VTS +EP+ Sbjct: 357 VTSCTKEPE 365>NP_001265536 Length = 554 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VTSAVREPK 9 VTS +RE K Sbjct: 92 VTSGMREEK 100>NP_055239 Length = 170 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VTSAVRE 7 VTSA+RE Sbjct: 137 VTSALRE 143>NP_001265537 Length = 526 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VTSAVREPK 9 VTS +RE K Sbjct: 64 VTSGMREEK 72>NP_001265535 Length = 526 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VTSAVREPK 9 VTS +RE K Sbjct: 64 VTSGMREEK 72>NP_853514 Length = 1732 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 VTSAVREP 8 VTSA EP Sbjct: 217 VTSAASEP 224>NP_001186 Length = 665 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VTSAVREPK 9 VTS +RE K Sbjct: 203 VTSGMREEK 211>XP_005261676 Length = 986 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VTSAVRE 7 VTSA+RE Sbjct: 267 VTSALRE 273>XP_006724320 Length = 1006 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VTSAVRE 7 VTSA+RE Sbjct: 267 VTSALRE 273>XP_006719760 Length = 504 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VTSAVREPK 9 VTS +EPK Sbjct: 387 VTSEDKEPK 395>XP_006719759 Length = 577 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VTSAVREPK 9 VTS +EPK Sbjct: 460 VTSEDKEPK 468>XP_006719758 Length = 578 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VTSAVREPK 9 VTS +EPK Sbjct: 508 VTSEDKEPK 516>XP_005254048 Length = 621 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VTSAVREPK 9 VTS +EPK Sbjct: 504 VTSEDKEPK 512>XP_006719757 Length = 625 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VTSAVREPK 9 VTS +EPK Sbjct: 508 VTSEDKEPK 516>XP_005250353 Length = 969 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 TSAVREP 8 TSAVR P Sbjct: 669 TSAVRTP 675>XP_006716008 Length = 988 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 TSAVREP 8 TSAVR P Sbjct: 688 TSAVRTP 694>XP_006716007 Length = 989 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 TSAVREP 8 TSAVR P Sbjct: 689 TSAVRTP 695>XP_006716006 Length = 990 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 TSAVREP 8 TSAVR P Sbjct: 690 TSAVRTP 696>XP_006716005 Length = 998 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 TSAVREP 8 TSAVR P Sbjct: 698 TSAVRTP 704>XP_006716004 Length = 1003 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 TSAVREP 8 TSAVR P Sbjct: 703 TSAVRTP 709>XP_006716003 Length = 1009 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 TSAVREP 8 TSAVR P Sbjct: 709 TSAVRTP 715>XP_006716002 Length = 1010 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 TSAVREP 8 TSAVR P Sbjct: 710 TSAVRTP 716>XP_005250348 Length = 1010 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 TSAVREP 8 TSAVR P Sbjct: 710 TSAVRTP 716>XP_005264435 Length = 544 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VTSAVREPK 9 VTS +EP+ Sbjct: 359 VTSCTKEPE 367>XP_005264434 Length = 843 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VTSAVREPK 9 VTS +EP+ Sbjct: 274 VTSCTKEPE 282>XP_005264433 Length = 899 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VTSAVREPK 9 VTS +EP+ Sbjct: 359 VTSCTKEPE 367>XP_005264432 Length = 899 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VTSAVREPK 9 VTS +EP+ Sbjct: 359 VTSCTKEPE 367>XP_005264431 Length = 928 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VTSAVREPK 9 VTS +EP+ Sbjct: 359 VTSCTKEPE 367>NP_001155177 Length = 540 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VTSAVREPK 9 VTS +RE K Sbjct: 78 VTSGMREEK 86>NP_997194 Length = 573 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VTSAVREPK 9 VTS +EPK Sbjct: 456 VTSEDKEPK 464Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.303 0.116 0.294 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 544,045 Number of extensions: 512 Number of successful extensions: 38 Number of sequences better than 10000.0: 38 Number of HSP's gapped: 38 Number of HSP's successfully gapped: 38 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.3 bits) S2: 28 (15.4 bits)
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |