Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_064450 21 175 XP_005273257 21 175 NP_056506 19 869 NP_001101 17 4312 NP_060483 17 4312 XP_005254174 17 4312 XP_006717512 17 4312 XP_005252522 17 4312 XP_005267098 17 4312 NP_001091671 16 5631 NP_001496 16 5631 NP_001035055 16 5631 NP_055832 16 5631 NP_963920 16 5631 NP_963918 16 5631 XP_005270706 16 5631 XP_005270705 16 5631 NP_001177694 16 5631 NP_006280 16 7355 NP_060236 16 7355 NP_001073312 16 7355 NP_694691 16 7355 NP_694690 16 7355 NP_066576 16 7355 XP_005261866 16 7355 XP_005261865 16 7355 XP_005261864 16 7355 XP_005261863 16 7355 XP_005261862 16 7355 XP_005261861 16 7355 XP_005261860 16 7355 XP_006716915 16 7355 XP_005251621 16 7355 XP_006710775 16 7355 XP_005263536 16 7355 NP_001116229 15 9605 NP_000297 15 9605 NP_115759 15 9605 NP_001180350 15 9605 NP_996744 15 9605 NP_775756 15 9605 NP_004146 15 9605 NP_056484 15 9605 XP_003846529 15 9605 XP_006723760 15 9605 XP_006717618 15 9605 XP_005269456 15 9605 XP_006717617 15 9605 XP_006717616 15 9605 XP_006717615 15 9605 XP_005269454 15 9605 XP_005269453 15 9605 XP_006717614 15 9605 XP_006717613 15 9605 XP_006717612 15 9605 XP_005269452 15 9605 XP_005269451 15 9605 XP_006717611 15 9605 XP_005269450 15 9605 XP_005269449 15 9605 XP_005269448 15 9605 XP_005269447 15 9605 XP_005269446 15 9605 XP_005269445 15 9605 XP_005249241 15 9605 XP_005247891 15 9605 XP_006713851 15 9605 NP_075066 15 9605>NP_064450 Length = 1722 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 VTSAFKNSC 9 V+SAFKNSC Sbjct: 845 VSSAFKNSC 853>XP_005273257 Length = 1726 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 VTSAFKNSC 9 V+SAFKNSC Sbjct: 849 VSSAFKNSC 857>NP_056506 Length = 1092 Score = 18.9 bits (37), Expect = 869 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VTSAFKNSC 9 +T +FKNSC Sbjct: 174 LTDSFKNSC 182>NP_001101 Length = 748 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TSAFKNSC 9 TSA KN+C Sbjct: 215 TSAEKNTC 222>NP_060483 Length = 873 Score = 16.5 bits (31), Expect = 4312 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 AFKNSC 9 AFKN+C Sbjct: 215 AFKNNC 220>XP_005254174 Length = 717 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TSAFKNSC 9 TSA KN+C Sbjct: 215 TSAEKNTC 222>XP_006717512 Length = 797 Score = 16.5 bits (31), Expect = 4312 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 VTSAFKNSC 9 +T A+K++C Sbjct: 521 ITDAYKSAC 529>XP_005252522 Length = 835 Score = 16.5 bits (31), Expect = 4312 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 VTSAFKNSC 9 +T A+K++C Sbjct: 559 ITDAYKSAC 567>XP_005267098 Length = 924 Score = 16.5 bits (31), Expect = 4312 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 AFKNSC 9 AFKN+C Sbjct: 266 AFKNNC 271>NP_001091671 Length = 375 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 SAFKNSC 9 +AF NSC Sbjct: 312 AAFSNSC 318>NP_001496 Length = 375 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 SAFKNSC 9 +AF NSC Sbjct: 312 AAFSNSC 318>NP_001035055 Length = 375 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 SAFKNSC 9 +AF NSC Sbjct: 312 AAFSNSC 318>NP_055832 Length = 942 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 SAFKNSC 9 SAF+N C Sbjct: 33 SAFRNHC 39>NP_963920 Length = 828 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 SAFKNSC 9 SAF+N C Sbjct: 33 SAFRNHC 39>NP_963918 Length = 911 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 SAFKNSC 9 SAF+N C Sbjct: 2 SAFRNHC 8>XP_005270706 Length = 851 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 SAFKNSC 9 SAF+N C Sbjct: 33 SAFRNHC 39>XP_005270705 Length = 934 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 SAFKNSC 9 SAF+N C Sbjct: 33 SAFRNHC 39>NP_001177694 Length = 207 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VTSAFKNSC 9 +T +FKN C Sbjct: 8 MTLSFKNRC 16>NP_006280 Length = 2541 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 TSAFKNSC 9 TSA NSC Sbjct: 1502 TSALCNSC 1509>NP_060236 Length = 1166 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 5/8 (62%) Query: 2 TSAFKNSC 9 T FKN C Sbjct: 618 TFTFKNKC 625>NP_001073312 Length = 1759 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 5/8 (62%) Query: 2 TSAFKNSC 9 T FKN C Sbjct: 618 TFTFKNKC 625>NP_694691 Length = 1161 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 VTSAFKN 7 VTS FKN Sbjct: 157 VTSRFKN 163>NP_694690 Length = 1170 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 VTSAFKN 7 VTS FKN Sbjct: 157 VTSRFKN 163>NP_066576 Length = 1198 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 VTSAFKN 7 VTS FKN Sbjct: 157 VTSRFKN 163>XP_005261866 Length = 1069 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 VTSAFKN 7 VTS FKN Sbjct: 19 VTSRFKN 25>XP_005261865 Length = 1174 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 VTSAFKN 7 VTS FKN Sbjct: 170 VTSRFKN 176>XP_005261864 Length = 1183 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 VTSAFKN 7 VTS FKN Sbjct: 170 VTSRFKN 176>XP_005261863 Length = 1207 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 VTSAFKN 7 VTS FKN Sbjct: 157 VTSRFKN 163>XP_005261862 Length = 1211 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 VTSAFKN 7 VTS FKN Sbjct: 170 VTSRFKN 176>XP_005261861 Length = 1220 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 VTSAFKN 7 VTS FKN Sbjct: 170 VTSRFKN 176>XP_005261860 Length = 1220 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 VTSAFKN 7 VTS FKN Sbjct: 170 VTSRFKN 176>XP_006716915 Length = 2542 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 TSAFKNSC 9 TSA NSC Sbjct: 1502 TSALCNSC 1509>XP_005251621 Length = 2542 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 TSAFKNSC 9 TSA NSC Sbjct: 1502 TSALCNSC 1509>XP_006710775 Length = 1759 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 5/8 (62%) Query: 2 TSAFKNSC 9 T FKN C Sbjct: 618 TFTFKNKC 625>XP_005263536 Length = 1783 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 5/8 (62%) Query: 2 TSAFKNSC 9 T FKN C Sbjct: 642 TFTFKNKC 649>NP_001116229 Length = 317 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 AFKNSC 9 +FKN+C Sbjct: 205 SFKNAC 210>NP_000297 Length = 291 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 AFKNSC 9 +FKN+C Sbjct: 179 SFKNAC 184>NP_115759 Length = 1004 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 AFKNSC 9 AFK SC Sbjct: 550 AFKESC 555>NP_001180350 Length = 1031 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 5/8 (62%) Query: 2 TSAFKNSC 9 TSA N C Sbjct: 670 TSALSNGC 677>NP_996744 Length = 2948 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 TSAFKNSC 9 TSA + SC Sbjct: 1174 TSALRESC 1181>NP_775756 Length = 1034 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 5/8 (62%) Query: 2 TSAFKNSC 9 TSA N C Sbjct: 673 TSALSNGC 680>NP_004146 Length = 376 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 3 SAFKNSC 9 S FK SC Sbjct: 102 STFKESC 108>NP_056484 Length = 795 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 TSAFKNS 8 T+AF+NS Sbjct: 785 TAAFRNS 791>XP_003846529 Length = 174 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VTSAFKNSC 9 VTS ++ SC Sbjct: 72 VTSCYQPSC 80>XP_006723760 Length = 1038 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 5/8 (62%) Query: 2 TSAFKNSC 9 TSA N C Sbjct: 677 TSALSNGC 684>XP_006717618 Length = 2826 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 TSAFKNSC 9 TSA + SC Sbjct: 1174 TSALRESC 1181>XP_005269456 Length = 2846 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 TSAFKNSC 9 TSA + SC Sbjct: 1194 TSALRESC 1201>XP_006717617 Length = 2887 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 TSAFKNSC 9 TSA + SC Sbjct: 1194 TSALRESC 1201>XP_006717616 Length = 2891 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 TSAFKNSC 9 TSA + SC Sbjct: 1194 TSALRESC 1201>XP_006717615 Length = 2903 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 TSAFKNSC 9 TSA + SC Sbjct: 1194 TSALRESC 1201>XP_005269454 Length = 2912 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 TSAFKNSC 9 TSA + SC Sbjct: 1194 TSALRESC 1201>XP_005269453 Length = 2922 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 TSAFKNSC 9 TSA + SC Sbjct: 1194 TSALRESC 1201>XP_006717614 Length = 2938 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 TSAFKNSC 9 TSA + SC Sbjct: 1194 TSALRESC 1201>XP_006717613 Length = 2948 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 TSAFKNSC 9 TSA + SC Sbjct: 1174 TSALRESC 1181>XP_006717612 Length = 2950 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 TSAFKNSC 9 TSA + SC Sbjct: 1194 TSALRESC 1201>XP_005269452 Length = 2954 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 TSAFKNSC 9 TSA + SC Sbjct: 1194 TSALRESC 1201>XP_005269451 Length = 2957 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 TSAFKNSC 9 TSA + SC Sbjct: 1194 TSALRESC 1201>XP_006717611 Length = 2964 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 TSAFKNSC 9 TSA + SC Sbjct: 1194 TSALRESC 1201>XP_005269450 Length = 2968 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 TSAFKNSC 9 TSA + SC Sbjct: 1194 TSALRESC 1201>XP_005269449 Length = 2969 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 TSAFKNSC 9 TSA + SC Sbjct: 1194 TSALRESC 1201>XP_005269448 Length = 2979 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 TSAFKNSC 9 TSA + SC Sbjct: 1174 TSALRESC 1181>XP_005269447 Length = 2980 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 TSAFKNSC 9 TSA + SC Sbjct: 1194 TSALRESC 1201>XP_005269446 Length = 2999 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 TSAFKNSC 9 TSA + SC Sbjct: 1194 TSALRESC 1201>XP_005269445 Length = 2999 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 TSAFKNSC 9 TSA + SC Sbjct: 1194 TSALRESC 1201>XP_005249241 Length = 376 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 3 SAFKNSC 9 S FK SC Sbjct: 102 STFKESC 108>XP_005247891 Length = 763 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 AFKNSC 9 AFK SC Sbjct: 550 AFKESC 555>XP_006713851 Length = 942 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 AFKNSC 9 AFK SC Sbjct: 550 AFKESC 555>NP_075066 Length = 332 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 SAFKNSC 9 +AF NSC Sbjct: 90 TAFVNSC 96Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.318 0.116 0.351 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 452,697 Number of extensions: 534 Number of successful extensions: 68 Number of sequences better than 10000.0: 68 Number of HSP's gapped: 68 Number of HSP's successfully gapped: 68 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.0 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |