Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001135941 18 1135 NP_001154819 18 1482 NP_001154817 18 1482 NP_060693 18 1482 NP_001154818 18 1482 NP_001154816 18 1482 NP_055921 18 1482 XP_006713125 18 1482 XP_006713124 18 1482 NP_000966 17 2528 NP_001186731 17 2528 NP_057195 17 2528 XP_006721056 17 2528 NP_775960 17 3301 NP_065810 17 3301 NP_001099007 17 3301 XP_006720684 17 3301 XP_005251991 17 3301 XP_006712793 17 3301 XP_003961007 17 3301 NP_001549 17 4312 NP_001139681 17 4312 NP_001230713 17 4312 NP_001137311 17 4312 NP_002590 17 4312 NP_001610 17 4312 NP_001159694 17 4312 XP_005255896 17 4312 XP_005255895 17 4312 XP_006718896 17 4312 XP_005274182 17 4312 XP_005274097 17 4312 NP_001073961 17 4312 NP_001034302 16 5631 NP_001274524 16 5631 NP_001072 16 5631 XP_006724113 16 5631 XP_003960994 16 5631 XP_003961011 16 5631 NP_001120 16 7355 NP_001230396 16 7355 NP_061834 16 7355 NP_689530 16 7355 NP_001091995 16 7355 NP_006827 16 7355 NP_004775 16 7355 NP_060674 16 7355 NP_072091 16 7355 NP_001001895 16 7355 NP_001534 16 7355 XP_006724076 16 7355 XP_005266401 16 7355 XP_005266400 16 7355 XP_005268499 16 7355 XP_005268497 16 7355 XP_005268496 16 7355 XP_005268495 16 7355 XP_006714846 16 7355 XP_006714845 16 7355 XP_005268494 16 7355 XP_005268492 16 7355 XP_005268491 16 7355 XP_005268493 16 7355 XP_005268490 16 7355 XP_006714479 16 7355 XP_006711547 16 7355 XP_006711545 16 7355 XP_006711544 16 7355 NP_001273615 16 7355 NP_751943 16 7355 NP_005895 15 9605 NP_001177750 15 9605 NP_006125 15 9605 NP_000190 15 9605 NP_065801 15 9605 NP_079203 15 9605 XP_006722159 15 9605 XP_005257640 15 9605 XP_005257639 15 9605 NP_001001657 15 9605 NP_001011719 15 9605>NP_001135941 Length = 187 Score = 18.5 bits (36), Expect = 1135 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VTRTGCLGK 9 +T TGC+G+ Sbjct: 5 LTETGCMGR 13>NP_001154819 Length = 572 Score = 18.1 bits (35), Expect = 1482 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 TRTGCLG 8 TRTGC G Sbjct: 433 TRTGCYG 439>NP_001154817 Length = 663 Score = 18.1 bits (35), Expect = 1482 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 TRTGCLG 8 TRTGC G Sbjct: 524 TRTGCYG 530>NP_060693 Length = 623 Score = 18.1 bits (35), Expect = 1482 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 TRTGCLG 8 TRTGC G Sbjct: 484 TRTGCYG 490>NP_001154818 Length = 652 Score = 18.1 bits (35), Expect = 1482 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 TRTGCLG 8 TRTGC G Sbjct: 513 TRTGCYG 519>NP_001154816 Length = 664 Score = 18.1 bits (35), Expect = 1482 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 TRTGCLG 8 TRTGC G Sbjct: 525 TRTGCYG 531>NP_055921 Length = 1467 Score = 18.1 bits (35), Expect = 1482 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 TRTGCLG 8 TR GCLG Sbjct: 816 TRAGCLG 822>XP_006713125 Length = 1467 Score = 18.1 bits (35), Expect = 1482 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 TRTGCLG 8 TR GCLG Sbjct: 816 TRAGCLG 822>XP_006713124 Length = 1467 Score = 18.1 bits (35), Expect = 1482 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 TRTGCLG 8 TR GCLG Sbjct: 816 TRAGCLG 822>NP_000966 Length = 178 Score = 17.3 bits (33), Expect = 2528 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 RTGCLG 8 RTGC+G Sbjct: 147 RTGCIG 152>NP_001186731 Length = 177 Score = 17.3 bits (33), Expect = 2528 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 RTGCLG 8 RTGC+G Sbjct: 146 RTGCIG 151>NP_057195 Length = 837 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VTRTGCLGK 9 ++R GCLG+ Sbjct: 623 LSRPGCLGR 631>XP_006721056 Length = 718 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VTRTGCLGK 9 ++R GCLG+ Sbjct: 623 LSRPGCLGR 631>NP_775960 Length = 1285 Score = 16.9 bits (32), Expect = 3301 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 TGCLGK 9 TGCLG+ Sbjct: 1011 TGCLGR 1016>NP_065810 Length = 4700 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 RTGCLGK 9 RTGCL K Sbjct: 886 RTGCLRK 892>NP_001099007 Length = 1687 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TRTGCLGK 9 +RTGC G+ Sbjct: 855 SRTGCQGR 862>XP_006720684 Length = 4713 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 RTGCLGK 9 RTGCL K Sbjct: 899 RTGCLRK 905>XP_005251991 Length = 953 Score = 16.9 bits (32), Expect = 3301 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 TGCLGK 9 TGCLG+ Sbjct: 679 TGCLGR 684>XP_006712793 Length = 1887 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TRTGCLGK 9 +RTGC G+ Sbjct: 1055 SRTGCQGR 1062>XP_003961007 Length = 465 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 TRTGCLGK 9 T GCLGK Sbjct: 102 TGRGCLGK 109>NP_001549 Length = 578 Score = 16.5 bits (31), Expect = 4312 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 TRTGCL 7 T+TGCL Sbjct: 458 TKTGCL 463>NP_001139681 Length = 932 Score = 16.5 bits (31), Expect = 4312 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 TGCLGK 9 TGCLG+ Sbjct: 284 TGCLGQ 289>NP_001230713 Length = 920 Score = 16.5 bits (31), Expect = 4312 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 TGCLGK 9 TGCLG+ Sbjct: 272 TGCLGQ 277>NP_001137311 Length = 934 Score = 16.5 bits (31), Expect = 4312 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 TGCLGK 9 TGCLG+ Sbjct: 286 TGCLGQ 291>NP_002590 Length = 941 Score = 16.5 bits (31), Expect = 4312 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 TGCLGK 9 TGCLG+ Sbjct: 293 TGCLGQ 298>NP_001610 Length = 689 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RTGCLGK 9 R GCLG+ Sbjct: 436 RLGCLGR 442>NP_001159694 Length = 950 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 VTRTGCLG 8 V RTGC G Sbjct: 88 VPRTGCPG 95>XP_005255896 Length = 296 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 TRTGCLG 8 T+T CLG Sbjct: 114 TKTACLG 120>XP_005255895 Length = 395 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 TRTGCLG 8 T+T CLG Sbjct: 213 TKTACLG 219>XP_006718896 Length = 558 Score = 16.5 bits (31), Expect = 4312 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 TRTGCL 7 T+TGCL Sbjct: 438 TKTGCL 443>XP_005274182 Length = 966 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 VTRTGCLG 8 V RTGC G Sbjct: 104 VPRTGCPG 111>XP_005274097 Length = 940 Score = 16.5 bits (31), Expect = 4312 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 TGCLGK 9 TGCLG+ Sbjct: 292 TGCLGQ 297>NP_001073961 Length = 395 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 TRTGCLG 8 T+T CLG Sbjct: 213 TKTACLG 219>NP_001034302 Length = 425 Score = 16.2 bits (30), Expect = 5631 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 TRTGC 6 TRTGC Sbjct: 234 TRTGC 238>NP_001274524 Length = 619 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RTGCLGK 9 R GCLG+ Sbjct: 372 RGGCLGR 378>NP_001072 Length = 3623 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 RTGCLGK 9 RTG LGK Sbjct: 64 RTGSLGK 70>XP_006724113 Length = 1206 Score = 16.2 bits (30), Expect = 5631 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 5 GCLGK 9 GCLGK Sbjct: 1197 GCLGK 1201>XP_003960994 Length = 316 Score = 16.2 bits (30), Expect = 5631 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 5 GCLGK 9 GCLGK Sbjct: 105 GCLGK 109>XP_003961011 Length = 321 Score = 16.2 bits (30), Expect = 5631 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 5 GCLGK 9 GCLGK Sbjct: 105 GCLGK 109>NP_001120 Length = 1158 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VTRTGCLGK 9 +TRT LGK Sbjct: 584 ITRTYSLGK 592>NP_001230396 Length = 526 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 3 RTGCLG 8 RTGC G Sbjct: 286 RTGCRG 291>NP_061834 Length = 661 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 3 RTGCLG 8 RTGC G Sbjct: 324 RTGCRG 329>NP_689530 Length = 294 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 3 RTGCLG 8 RTGC G Sbjct: 51 RTGCSG 56>NP_001091995 Length = 683 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 TRTGCLGK 9 TRT CL K Sbjct: 584 TRTSCLIK 591>NP_006827 Length = 2671 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 VTRTGCLGK 9 ++ GCLG+ Sbjct: 2444 ISSAGCLGE 2452>NP_004775 Length = 873 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RTGCLGK 9 +T CLGK Sbjct: 816 KTKCLGK 822>NP_060674 Length = 682 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 TRTGCLGK 9 TRT CL K Sbjct: 583 TRTSCLIK 590>NP_072091 Length = 872 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RTGCLGK 9 +T CLGK Sbjct: 815 KTKCLGK 821>NP_001001895 Length = 623 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 3 RTGCLG 8 RTGC G Sbjct: 286 RTGCRG 291>NP_001534 Length = 882 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RTGCLGK 9 +T CLGK Sbjct: 825 KTKCLGK 831>XP_006724076 Length = 642 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 3 RTGCLG 8 RTGC G Sbjct: 305 RTGCRG 310>XP_005266401 Length = 635 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 TRTGCLGK 9 TRT CL K Sbjct: 536 TRTSCLIK 543>XP_005266400 Length = 677 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 TRTGCLGK 9 TRT CL K Sbjct: 578 TRTSCLIK 585>XP_005268499 Length = 471 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RTGCLGK 9 +T CLGK Sbjct: 401 KTKCLGK 407>XP_005268497 Length = 825 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RTGCLGK 9 +T CLGK Sbjct: 768 KTKCLGK 774>XP_005268496 Length = 825 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RTGCLGK 9 +T CLGK Sbjct: 768 KTKCLGK 774>XP_005268495 Length = 838 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RTGCLGK 9 +T CLGK Sbjct: 768 KTKCLGK 774>XP_006714846 Length = 882 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RTGCLGK 9 +T CLGK Sbjct: 825 KTKCLGK 831>XP_006714845 Length = 895 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RTGCLGK 9 +T CLGK Sbjct: 825 KTKCLGK 831>XP_005268494 Length = 895 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RTGCLGK 9 +T CLGK Sbjct: 825 KTKCLGK 831>XP_005268492 Length = 895 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RTGCLGK 9 +T CLGK Sbjct: 825 KTKCLGK 831>XP_005268491 Length = 895 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RTGCLGK 9 +T CLGK Sbjct: 825 KTKCLGK 831>XP_005268493 Length = 895 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RTGCLGK 9 +T CLGK Sbjct: 825 KTKCLGK 831>XP_005268490 Length = 895 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RTGCLGK 9 +T CLGK Sbjct: 825 KTKCLGK 831>XP_006714479 Length = 873 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RTGCLGK 9 +T CLGK Sbjct: 816 KTKCLGK 822>XP_006711547 Length = 572 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 3 RTGCL 7 RTGCL Sbjct: 63 RTGCL 67>XP_006711545 Length = 247 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 VTRTGC 6 VTR GC Sbjct: 186 VTRAGC 191>XP_006711544 Length = 251 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 VTRTGC 6 VTR GC Sbjct: 186 VTRAGC 191>NP_001273615 Length = 634 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 TRTGCLGK 9 TRT CL K Sbjct: 535 TRTSCLIK 542>NP_751943 Length = 406 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 TGCLGK 9 T CLGK Sbjct: 303 TACLGK 308>NP_005895 Length = 426 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 2 TRTGCL 7 TRT CL Sbjct: 121 TRTACL 126>NP_001177750 Length = 425 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 2 TRTGCL 7 TRT CL Sbjct: 121 TRTACL 126>NP_006125 Length = 158 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 TGCLGK 9 +GCLG+ Sbjct: 87 SGCLGR 92>NP_000190 Length = 502 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RTGCLGK 9 RTG +GK Sbjct: 117 RTGIIGK 123>NP_065801 Length = 1204 Score = 15.4 bits (28), Expect = 9605 Identities = 4/5 (80%), Positives = 5/5 (100%) Query: 5 GCLGK 9 GC+GK Sbjct: 1156 GCIGK 1160>NP_079203 Length = 793 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 RTGCLGK 9 ++GCLG+ Sbjct: 784 QSGCLGQ 790>XP_006722159 Length = 790 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 RTGCLGK 9 ++GCLG+ Sbjct: 781 QSGCLGQ 787>XP_005257640 Length = 340 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RTGCLGK 9 RTG +GK Sbjct: 117 RTGIIGK 123>XP_005257639 Length = 362 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RTGCLGK 9 RTG +GK Sbjct: 117 RTGIIGK 123>NP_001001657 Length = 311 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 VTRTGCLGK 9 +TR GC+ + Sbjct: 92 ITRGGCVAQ 100>NP_001011719 Length = 562 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RTGCLGK 9 RTG +GK Sbjct: 109 RTGLIGK 115Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.324 0.142 0.465 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 615,070 Number of extensions: 755 Number of successful extensions: 81 Number of sequences better than 10000.0: 81 Number of HSP's gapped: 81 Number of HSP's successfully gapped: 81 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.9 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |