Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_722576 19 665 XP_005262424 19 665 NP_001035877 16 7355 NP_001035814 16 7355 NP_056062 16 7355 NP_079245 16 7355 NP_001165644 16 7355 XP_005259931 16 7355 XP_005259930 16 7355 XP_006721215 16 7355 XP_006721214 16 7355 XP_006721213 16 7355 XP_006721212 16 7355 XP_005255869 16 7355 XP_006721211 16 7355 XP_005254426 16 7355 XP_006719811 16 7355 XP_005266249 16 7355 XP_005246922 16 7355 XP_006710028 16 7355 XP_005275786 16 7355 NP_001034703 16 7355 NP_004534 15 9605 NP_001258137 15 9605 NP_001157980 15 9605 NP_001157979 15 9605 NP_006807 15 9605 NP_057490 15 9605 XP_005246675 15 9605 XP_005246674 15 9605 XP_005246672 15 9605 XP_005246670 15 9605 XP_005246669 15 9605 XP_005246668 15 9605 XP_005246667 15 9605 XP_005246665 15 9605 XP_006712605 15 9605 XP_006712604 15 9605 XP_005246663 15 9605 XP_005246660 15 9605 XP_005246661 15 9605 XP_005246659 15 9605 XP_005246658 15 9605 XP_005246657 15 9605 XP_005246656 15 9605 XP_005246655 15 9605 XP_005246654 15 9605 XP_005246653 15 9605 XP_005246652 15 9605 XP_005246649 15 9605 XP_005246651 15 9605 XP_005246650 15 9605 XP_005246648 15 9605 XP_005246647 15 9605 XP_005245311 15 9605>NP_722576 Length = 3080 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VTDESTQRV 9 VTDES QRV Sbjct: 870 VTDESAQRV 878>XP_005262424 Length = 2875 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VTDESTQRV 9 VTDES QRV Sbjct: 665 VTDESAQRV 673>NP_001035877 Length = 953 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VTDESTQRV 9 VTD+ TQ++ Sbjct: 30 VTDKQTQKL 38>NP_001035814 Length = 953 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VTDESTQRV 9 VTD+ TQ++ Sbjct: 30 VTDKQTQKL 38>NP_056062 Length = 956 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VTDESTQRV 9 VTD+ TQ++ Sbjct: 30 VTDKQTQKL 38>NP_079245 Length = 585 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 VTDESTQ 7 VTD STQ Sbjct: 356 VTDSSTQ 362>NP_001165644 Length = 585 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 VTDESTQ 7 VTD STQ Sbjct: 356 VTDSSTQ 362>XP_005259931 Length = 716 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TDESTQRV 9 TD ST+R+ Sbjct: 569 TDSSTRRI 576>XP_005259930 Length = 718 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TDESTQRV 9 TD ST+R+ Sbjct: 571 TDSSTRRI 578>XP_006721215 Length = 943 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VTDESTQRV 9 VTD+ TQ++ Sbjct: 30 VTDKQTQKL 38>XP_006721214 Length = 953 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VTDESTQRV 9 VTD+ TQ++ Sbjct: 30 VTDKQTQKL 38>XP_006721213 Length = 953 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VTDESTQRV 9 VTD+ TQ++ Sbjct: 30 VTDKQTQKL 38>XP_006721212 Length = 953 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VTDESTQRV 9 VTD+ TQ++ Sbjct: 30 VTDKQTQKL 38>XP_005255869 Length = 953 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VTDESTQRV 9 VTD+ TQ++ Sbjct: 30 VTDKQTQKL 38>XP_006721211 Length = 953 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VTDESTQRV 9 VTD+ TQ++ Sbjct: 30 VTDKQTQKL 38>XP_005254426 Length = 293 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VTDESTQRV 9 V+D+STQ V Sbjct: 271 VSDKSTQTV 279>XP_006719811 Length = 582 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VTDESTQR 8 V+D STQR Sbjct: 362 VSDTSTQR 369>XP_005266249 Length = 582 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VTDESTQR 8 V+D STQR Sbjct: 362 VSDTSTQR 369>XP_005246922 Length = 617 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 VTDESTQ 7 VTD STQ Sbjct: 388 VTDSSTQ 394>XP_006710028 Length = 582 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VTDESTQR 8 V+D STQR Sbjct: 362 VSDTSTQR 369>XP_005275786 Length = 582 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VTDESTQR 8 V+D STQR Sbjct: 362 VSDTSTQR 369>NP_001034703 Length = 293 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VTDESTQRV 9 V+D+STQ V Sbjct: 271 VSDKSTQTV 279>NP_004534 Length = 6669 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VTDESTQRV 9 VTD T+RV Sbjct: 6453 VTDPITERV 6461>NP_001258137 Length = 8560 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VTDESTQRV 9 VTD T+RV Sbjct: 8344 VTDPITERV 8352>NP_001157980 Length = 8525 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VTDESTQRV 9 VTD T+RV Sbjct: 8309 VTDPITERV 8317>NP_001157979 Length = 8525 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VTDESTQRV 9 VTD T+RV Sbjct: 8309 VTDPITERV 8317>NP_006807 Length = 356 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 DESTQRV 9 DE+T+RV Sbjct: 167 DETTERV 173>NP_057490 Length = 167 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VTDESTQRV 9 + DE+T+RV Sbjct: 1 MADEATRRV 9>XP_005246675 Length = 5223 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VTDESTQRV 9 VTD T+RV Sbjct: 5007 VTDPITERV 5015>XP_005246674 Length = 7553 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VTDESTQRV 9 VTD T+RV Sbjct: 7337 VTDPITERV 7345>XP_005246672 Length = 8277 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VTDESTQRV 9 VTD T+RV Sbjct: 8061 VTDPITERV 8069>XP_005246670 Length = 8282 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VTDESTQRV 9 VTD T+RV Sbjct: 8066 VTDPITERV 8074>XP_005246669 Length = 8282 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VTDESTQRV 9 VTD T+RV Sbjct: 8066 VTDPITERV 8074>XP_005246668 Length = 8308 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VTDESTQRV 9 VTD T+RV Sbjct: 8092 VTDPITERV 8100>XP_005246667 Length = 8308 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VTDESTQRV 9 VTD T+RV Sbjct: 8092 VTDPITERV 8100>XP_005246665 Length = 8339 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VTDESTQRV 9 VTD T+RV Sbjct: 8123 VTDPITERV 8131>XP_006712605 Length = 8370 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VTDESTQRV 9 VTD T+RV Sbjct: 8154 VTDPITERV 8162>XP_006712604 Length = 8370 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VTDESTQRV 9 VTD T+RV Sbjct: 8154 VTDPITERV 8162>XP_005246663 Length = 8370 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VTDESTQRV 9 VTD T+RV Sbjct: 8154 VTDPITERV 8162>XP_005246660 Length = 8370 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VTDESTQRV 9 VTD T+RV Sbjct: 8154 VTDPITERV 8162>XP_005246661 Length = 8370 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VTDESTQRV 9 VTD T+RV Sbjct: 8154 VTDPITERV 8162>XP_005246659 Length = 8401 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VTDESTQRV 9 VTD T+RV Sbjct: 8185 VTDPITERV 8193>XP_005246658 Length = 8401 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VTDESTQRV 9 VTD T+RV Sbjct: 8185 VTDPITERV 8193>XP_005246657 Length = 8432 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VTDESTQRV 9 VTD T+RV Sbjct: 8216 VTDPITERV 8224>XP_005246656 Length = 8432 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VTDESTQRV 9 VTD T+RV Sbjct: 8216 VTDPITERV 8224>XP_005246655 Length = 8463 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VTDESTQRV 9 VTD T+RV Sbjct: 8247 VTDPITERV 8255>XP_005246654 Length = 8463 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VTDESTQRV 9 VTD T+RV Sbjct: 8247 VTDPITERV 8255>XP_005246653 Length = 8463 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VTDESTQRV 9 VTD T+RV Sbjct: 8247 VTDPITERV 8255>XP_005246652 Length = 8494 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VTDESTQRV 9 VTD T+RV Sbjct: 8278 VTDPITERV 8286>XP_005246649 Length = 8494 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VTDESTQRV 9 VTD T+RV Sbjct: 8278 VTDPITERV 8286>XP_005246651 Length = 8494 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VTDESTQRV 9 VTD T+RV Sbjct: 8278 VTDPITERV 8286>XP_005246650 Length = 8494 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VTDESTQRV 9 VTD T+RV Sbjct: 8278 VTDPITERV 8286>XP_005246648 Length = 8494 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VTDESTQRV 9 VTD T+RV Sbjct: 8278 VTDPITERV 8286>XP_005246647 Length = 8494 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VTDESTQRV 9 VTD T+RV Sbjct: 8278 VTDPITERV 8286>XP_005245311 Length = 122 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VTDESTQRV 9 + DE+T+RV Sbjct: 1 MADEATRRV 9Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.300 0.112 0.266 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 513,645 Number of extensions: 1089 Number of successful extensions: 55 Number of sequences better than 10000.0: 55 Number of HSP's gapped: 55 Number of HSP's successfully gapped: 55 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.3 bits) S2: 28 (15.4 bits)
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |