Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000043 18 1482 NP_001269153 18 1482 NP_000772 17 2528 NP_001093243 17 2528 XP_006720468 17 2528 XP_006720467 17 2528 NP_064505 17 4312 XP_005248304 17 4312 XP_006712699 17 4312 XP_006712698 17 4312 XP_006712697 17 4312 NP_001191762 16 5631 NP_001191760 16 5631 NP_060545 16 5631 NP_001191761 16 5631 XP_005265322 16 5631 NP_002935 16 7355 NP_056493 16 7355 XP_006719869 16 7355 XP_006719868 16 7355 XP_005266409 16 7355 XP_005266407 16 7355 XP_005266403 16 7355 XP_006719867 16 7355 XP_006719866 16 7355 XP_005266405 16 7355 XP_005266404 16 7355 XP_006715611 16 7355 NP_001191126 16 7355 NP_001121371 15 9605 NP_001269092 15 9605 NP_001121370 15 9605 NP_000075 15 9605 NP_006717 15 9605 NP_001186211 15 9605 NP_563615 15 9605 XP_005263433 15 9605 XP_005263432 15 9605 XP_005263431 15 9605 XP_006714492 15 9605 XP_005263430 15 9605 XP_005263429 15 9605>NP_000043 Length = 1500 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VTASMTMRW 9 VTAS+T+ W Sbjct: 92 VTASLTLPW 100>NP_001269153 Length = 1422 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VTASMTMRW 9 VTAS+T+ W Sbjct: 92 VTASLTLPW 100>NP_000772 Length = 521 Score = 17.3 bits (33), Expect = 2528 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TASMTMRW 9 T SMT++W Sbjct: 330 TTSMTLQW 337>NP_001093243 Length = 363 Score = 17.3 bits (33), Expect = 2528 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TASMTMRW 9 T SMT++W Sbjct: 172 TTSMTLQW 179>XP_006720468 Length = 433 Score = 17.3 bits (33), Expect = 2528 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TASMTMRW 9 T SMT++W Sbjct: 242 TTSMTLQW 249>XP_006720467 Length = 450 Score = 17.3 bits (33), Expect = 2528 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TASMTMRW 9 T SMT++W Sbjct: 259 TTSMTLQW 266>NP_064505 Length = 1555 Score = 16.5 bits (31), Expect = 4312 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 VTASMTMRW 9 +T S+T +W Sbjct: 47 ITTSLTTKW 55>XP_005248304 Length = 267 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 ASMTMRW 9 A+MTM W Sbjct: 10 AAMTMEW 16>XP_006712699 Length = 1544 Score = 16.5 bits (31), Expect = 4312 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 VTASMTMRW 9 +T S+T +W Sbjct: 36 ITTSLTTKW 44>XP_006712698 Length = 1547 Score = 16.5 bits (31), Expect = 4312 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 VTASMTMRW 9 +T S+T +W Sbjct: 47 ITTSLTTKW 55>XP_006712697 Length = 1549 Score = 16.5 bits (31), Expect = 4312 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 VTASMTMRW 9 +T S+T +W Sbjct: 41 ITTSLTTKW 49>NP_001191762 Length = 549 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 ASMTMRW 9 A+MT RW Sbjct: 155 ANMTYRW 161>NP_001191760 Length = 627 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 ASMTMRW 9 A+MT RW Sbjct: 266 ANMTYRW 272>NP_060545 Length = 660 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 ASMTMRW 9 A+MT RW Sbjct: 266 ANMTYRW 272>NP_001191761 Length = 594 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 ASMTMRW 9 A+MT RW Sbjct: 200 ANMTYRW 206>XP_005265322 Length = 621 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 ASMTMRW 9 A+MT RW Sbjct: 266 ANMTYRW 272>NP_002935 Length = 2347 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 SMTMRW 9 +MT+RW Sbjct: 114 NMTLRW 119>NP_056493 Length = 2946 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 TASMTMRW 9 +++MT RW Sbjct: 2282 SSNMTQRW 2289>XP_006719869 Length = 2943 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 TASMTMRW 9 +++MT RW Sbjct: 2279 SSNMTQRW 2286>XP_006719868 Length = 2938 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 TASMTMRW 9 +++MT RW Sbjct: 2279 SSNMTQRW 2286>XP_005266409 Length = 1430 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 TASMTMRW 9 +++MT RW Sbjct: 745 SSNMTQRW 752>XP_005266407 Length = 2641 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 TASMTMRW 9 +++MT RW Sbjct: 1956 SSNMTQRW 1963>XP_005266403 Length = 2941 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 TASMTMRW 9 +++MT RW Sbjct: 2282 SSNMTQRW 2289>XP_006719867 Length = 2961 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 TASMTMRW 9 +++MT RW Sbjct: 2276 SSNMTQRW 2283>XP_006719866 Length = 2962 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 TASMTMRW 9 +++MT RW Sbjct: 2282 SSNMTQRW 2289>XP_005266405 Length = 2964 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 TASMTMRW 9 +++MT RW Sbjct: 2279 SSNMTQRW 2286>XP_005266404 Length = 2967 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 TASMTMRW 9 +++MT RW Sbjct: 2282 SSNMTQRW 2289>XP_006715611 Length = 2342 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 SMTMRW 9 +MT+RW Sbjct: 123 NMTLRW 128>NP_001191126 Length = 739 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 TASMTMRW 9 +++MT RW Sbjct: 75 SSNMTQRW 82>NP_001121371 Length = 816 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 VTASMTMRW 9 + A+MT +W Sbjct: 609 MAAAMTSKW 617>NP_001269092 Length = 766 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 VTASMTMRW 9 + A+MT +W Sbjct: 559 MAAAMTSKW 567>NP_001121370 Length = 816 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 VTASMTMRW 9 + A+MT +W Sbjct: 609 MAAAMTSKW 617>NP_000075 Length = 746 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 VTASMTMRW 9 + A+MT +W Sbjct: 539 MAAAMTSKW 547>NP_006717 Length = 2863 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 ASMTMRW 9 ++MT RW Sbjct: 2209 SNMTQRW 2215>NP_001186211 Length = 2851 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 ASMTMRW 9 ++MT RW Sbjct: 2198 SNMTQRW 2204>NP_563615 Length = 775 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 6/9 (66%) Query: 1 VTASMTMRW 9 +TAS + W Sbjct: 308 ITASSVLEW 316>XP_005263433 Length = 2832 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 ASMTMRW 9 ++MT RW Sbjct: 2173 SNMTQRW 2179>XP_005263432 Length = 2852 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 ASMTMRW 9 ++MT RW Sbjct: 2198 SNMTQRW 2204>XP_005263431 Length = 2857 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 ASMTMRW 9 ++MT RW Sbjct: 2198 SNMTQRW 2204>XP_006714492 Length = 2867 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 ASMTMRW 9 ++MT RW Sbjct: 2209 SNMTQRW 2215>XP_005263430 Length = 2868 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 ASMTMRW 9 ++MT RW Sbjct: 2209 SNMTQRW 2215>XP_005263429 Length = 2868 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 ASMTMRW 9 ++MT RW Sbjct: 2209 SNMTQRW 2215Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.328 0.112 0.405 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 285,478 Number of extensions: 340 Number of successful extensions: 42 Number of sequences better than 10000.0: 42 Number of HSP's gapped: 42 Number of HSP's successfully gapped: 42 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.4 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |