Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_006501 18 1135 NP_003974 17 3301 NP_001070253 17 3301 NP_008970 16 5631 NP_058641 16 5631 XP_005267344 16 5631 NP_001119577 16 7355 NP_001119578 16 7355 NP_078858 16 7355 NP_001278232 16 7355 NP_001278214 16 7355 NP_001137420 16 7355 NP_116133 16 7355 NP_002604 16 7355 NP_001248745 16 7355 NP_001257625 16 7355 NP_001257624 16 7355 NP_060757 16 7355 NP_078904 16 7355 NP_001182412 16 7355 XP_005255413 16 7355 XP_006720365 16 7355 XP_006720074 16 7355 XP_006717604 16 7355 XP_006717603 16 7355 XP_005249511 16 7355 XP_005275825 16 7355 XP_003960932 16 7355 XP_006710060 16 7355 NP_115758 15 9605 NP_570629 15 9605 NP_001034439 15 9605 NP_001927 15 9605 NP_001277181 15 9605 XP_006715935 15 9605 XP_006715934 15 9605 XP_006710661 15 9605 XP_006710659 15 9605 XP_006710658 15 9605 XP_006710657 15 9605 NP_001053 15 9605 NP_001968 15 9605>NP_006501 Length = 513 Score = 18.5 bits (36), Expect = 1135 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 YFSLSYS 9 YFSLSYS Sbjct: 473 YFSLSYS 479>NP_003974 Length = 515 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VSYFSLSY 8 ++YFS SY Sbjct: 390 INYFSFSY 397>NP_001070253 Length = 515 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VSYFSLSY 8 ++YFS SY Sbjct: 390 INYFSFSY 397>NP_008970 Length = 1174 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VSYFSLSY 8 V+YFSL Y Sbjct: 61 VTYFSLWY 68Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 FSLSYS 9 FSLSYS Sbjct: 512 FSLSYS 517>NP_058641 Length = 291 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 SYFSLSY 8 SYF+L+Y Sbjct: 70 SYFNLNY 76>XP_005267344 Length = 1174 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VSYFSLSY 8 V+YFSL Y Sbjct: 61 VTYFSLWY 68Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 FSLSYS 9 FSLSYS Sbjct: 512 FSLSYS 517>NP_001119577 Length = 511 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 VSYFSLSY 8 ++Y+S SY Sbjct: 382 INYYSFSY 389>NP_001119578 Length = 511 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 VSYFSLSY 8 ++Y+S SY Sbjct: 382 INYYSFSY 389>NP_078858 Length = 4981 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SYFSLS 7 SYFSLS Sbjct: 3556 SYFSLS 3561>NP_001278232 Length = 4983 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SYFSLS 7 SYFSLS Sbjct: 3558 SYFSLS 3563>NP_001278214 Length = 4982 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SYFSLS 7 SYFSLS Sbjct: 3558 SYFSLS 3563>NP_001137420 Length = 248 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 SYFSLSY 8 ++FSLSY Sbjct: 213 AFFSLSY 219>NP_116133 Length = 230 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 SYFSLSY 8 ++FSLSY Sbjct: 195 AFFSLSY 201>NP_002604 Length = 556 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 YFSLSYS 9 YF LSY+ Sbjct: 156 YFGLSYA 162>NP_001248745 Length = 454 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 YFSLSYS 9 YF LSY+ Sbjct: 156 YFGLSYA 162>NP_001257625 Length = 816 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SYFSLSYS 9 +Y+S SYS Sbjct: 323 NYYSTSYS 330>NP_001257624 Length = 841 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SYFSLSYS 9 +Y+S SYS Sbjct: 323 NYYSTSYS 330>NP_060757 Length = 846 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SYFSLSYS 9 +Y+S SYS Sbjct: 323 NYYSTSYS 330>NP_078904 Length = 714 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SYFSLS 7 SYFSLS Sbjct: 401 SYFSLS 406>NP_001182412 Length = 714 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SYFSLS 7 SYFSLS Sbjct: 401 SYFSLS 406>XP_005255413 Length = 529 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 YFSLSYS 9 YF LSY+ Sbjct: 129 YFGLSYA 135>XP_006720365 Length = 511 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 VSYFSLSY 8 ++Y+S SY Sbjct: 382 INYYSFSY 389>XP_006720074 Length = 1051 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 FSLSYS 9 FSLSYS Sbjct: 389 FSLSYS 394>XP_006717604 Length = 820 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SYFSLSYS 9 +Y+S SYS Sbjct: 323 NYYSTSYS 330>XP_006717603 Length = 846 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SYFSLSYS 9 +Y+S SYS Sbjct: 323 NYYSTSYS 330>XP_005249511 Length = 230 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 SYFSLSY 8 ++FSLSY Sbjct: 195 AFFSLSY 201>XP_005275825 Length = 218 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 YFSLSYS 9 YF LSY+ Sbjct: 129 YFGLSYA 135>XP_003960932 Length = 396 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 YFSLSYS 9 YF LSY+ Sbjct: 129 YFGLSYA 135>XP_006710060 Length = 425 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 YFSLSYS 9 YF LSY+ Sbjct: 129 YFGLSYA 135>NP_115758 Length = 612 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 YFSLSYS 9 YF LS+S Sbjct: 351 YFGLSFS 357>NP_570629 Length = 865 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SYFSLSYS 9 +YFS S+S Sbjct: 537 TYFSASFS 544>NP_001034439 Length = 801 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SYFSLSYS 9 +YFS S+S Sbjct: 473 TYFSASFS 480>NP_001927 Length = 803 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SYFSLSYS 9 +YFS S+S Sbjct: 475 TYFSASFS 482>NP_001277181 Length = 758 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SYFSLSYS 9 +YFS S+S Sbjct: 430 TYFSASFS 437>XP_006715935 Length = 804 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SYFSLSYS 9 +YFS S+S Sbjct: 476 TYFSASFS 483>XP_006715934 Length = 804 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SYFSLSYS 9 +YFS S+S Sbjct: 476 TYFSASFS 483>XP_006710661 Length = 4057 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 SYFSLSY 8 S FSLSY Sbjct: 1561 SQFSLSY 1567>XP_006710659 Length = 4556 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 SYFSLSY 8 S FSLSY Sbjct: 1537 SQFSLSY 1543>XP_006710658 Length = 4563 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 SYFSLSY 8 S FSLSY Sbjct: 1544 SQFSLSY 1550>XP_006710657 Length = 4579 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 SYFSLSY 8 S FSLSY Sbjct: 1560 SQFSLSY 1566>NP_001053 Length = 433 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SYFSLSYS 9 SY S++YS Sbjct: 332 SYISVNYS 339>NP_001968 Length = 957 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 YFSLSYS 9 YF+++YS Sbjct: 336 YFAMNYS 342Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.318 0.125 0.332 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 536,236 Number of extensions: 980 Number of successful extensions: 44 Number of sequences better than 10000.0: 42 Number of HSP's gapped: 44 Number of HSP's successfully gapped: 44 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.9 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |