Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_037440 18 1135 XP_005247460 18 1135 XP_005247459 18 1135 NP_036423 17 2528 XP_006719768 17 2528 NP_001122306 17 4312 NP_000524 17 4312 NP_955772 17 4312 NP_569055 16 5631 NP_000676 16 5631 NP_033611 16 5631 NP_114438 16 5631 NP_004826 16 5631 NP_114038 16 5631 NP_000858 16 5631 NP_036471 16 5631 NP_001257951 16 5631 NP_001257952 16 5631 NP_005289 16 5631 XP_005246577 16 5631 XP_006712545 16 5631 NP_001257906 16 7355 NP_001257904 16 7355 NP_001257905 16 7355 NP_055576 16 7355 NP_064707 16 7355 NP_003244 16 7355 NP_064505 16 7355 NP_056996 16 7355 NP_775760 16 7355 NP_001001479 16 7355 XP_005261097 16 7355 XP_005261096 16 7355 XP_005261095 16 7355 XP_005261094 16 7355 XP_005250985 16 7355 XP_006716634 16 7355 XP_006714502 16 7355 XP_005246155 16 7355 XP_006712703 16 7355 XP_005246154 16 7355 XP_006712699 16 7355 XP_006712698 16 7355 XP_006712697 16 7355 NP_003741 15 9605 NP_060831 15 9605 NP_005283 15 9605 NP_000557 15 9605 NP_001004340 15 9605 NP_001017986 15 9605 XP_006720009 15 9605 XP_005245015 15 9605 XP_005245014 15 9605 NP_001091670 15 9605 NP_001135780 15 9605>NP_037440 Length = 319 Score = 18.5 bits (36), Expect = 1135 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 VSTVIWLL 8 +STV+WL+ Sbjct: 134 ISTVVWLM 141>XP_005247460 Length = 319 Score = 18.5 bits (36), Expect = 1135 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 VSTVIWLL 8 +STV+WL+ Sbjct: 134 ISTVVWLM 141>XP_005247459 Length = 319 Score = 18.5 bits (36), Expect = 1135 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 VSTVIWLL 8 +STV+WL+ Sbjct: 134 ISTVVWLM 141>NP_036423 Length = 2120 Score = 17.3 bits (33), Expect = 2528 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 STVIWLL 8 STV+W+L Sbjct: 432 STVVWML 438>XP_006719768 Length = 2120 Score = 17.3 bits (33), Expect = 2528 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 STVIWLL 8 STV+W+L Sbjct: 432 STVVWML 438>NP_001122306 Length = 277 Score = 16.5 bits (31), Expect = 4312 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 TVIWLL 8 TV+WLL Sbjct: 160 TVVWLL 165>NP_000524 Length = 277 Score = 16.5 bits (31), Expect = 4312 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 TVIWLL 8 TV+WLL Sbjct: 160 TVVWLL 165>NP_955772 Length = 242 Score = 16.5 bits (31), Expect = 4312 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 TVIWLL 8 TV+WLL Sbjct: 125 TVVWLL 130>NP_569055 Length = 791 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 VIWLLA 9 V+WLLA Sbjct: 659 VVWLLA 664>NP_000676 Length = 359 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 VIWLLA 9 +IWLLA Sbjct: 151 IIWLLA 156>NP_033611 Length = 359 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 VIWLLA 9 +IWLLA Sbjct: 151 IIWLLA 156>NP_114438 Length = 388 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 VIWLLA 9 +IWLLA Sbjct: 180 IIWLLA 185>NP_004826 Length = 394 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 VIWLLA 9 +IWLLA Sbjct: 186 IIWLLA 191>NP_114038 Length = 394 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 VIWLLA 9 +IWLLA Sbjct: 186 IIWLLA 191>NP_000858 Length = 481 Score = 16.2 bits (30), Expect = 5631 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 TVIWLLA 9 TV+WL++ Sbjct: 177 TVVWLIS 183>NP_036471 Length = 294 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 STVIWLL 8 STV WL+ Sbjct: 28 STVFWLI 34>NP_001257951 Length = 664 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 VIWLLA 9 V+WLLA Sbjct: 532 VVWLLA 537>NP_001257952 Length = 698 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 VIWLLA 9 V+WLLA Sbjct: 566 VVWLLA 571>NP_005289 Length = 361 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 VIWLLA 9 V+WLLA Sbjct: 60 VVWLLA 65>XP_005246577 Length = 362 Score = 16.2 bits (30), Expect = 5631 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 TVIWLLA 9 TV+WL++ Sbjct: 58 TVVWLIS 64>XP_006712545 Length = 456 Score = 16.2 bits (30), Expect = 5631 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 TVIWLLA 9 TV+WL++ Sbjct: 152 TVVWLIS 158>NP_001257906 Length = 335 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 VSTVIW 6 VST+IW Sbjct: 100 VSTLIW 105>NP_001257904 Length = 366 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 VSTVIW 6 VST+IW Sbjct: 100 VSTLIW 105>NP_001257905 Length = 379 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 VSTVIW 6 VST+IW Sbjct: 113 VSTLIW 118>NP_055576 Length = 360 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 VSTVIW 6 VST+IW Sbjct: 100 VSTLIW 105>NP_064707 Length = 362 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VSTVIWLLA 9 V ++WLLA Sbjct: 164 VCILVWLLA 172>NP_003244 Length = 1591 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 STVIWL 7 +TVIWL Sbjct: 1271 TTVIWL 1276>NP_064505 Length = 1555 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VSTVIWLLA 9 V TV+WL + Sbjct: 30 VLTVLWLFS 38>NP_056996 Length = 1406 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VSTVIWLL 8 VST +WL+ Sbjct: 1261 VSTGLWLM 1268>NP_775760 Length = 1585 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 VSTVIW 6 +STV+W Sbjct: 565 ISTVLW 570>NP_001001479 Length = 350 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 VSTVIWLLA 9 ++ ++WLLA Sbjct: 51 MAALVWLLA 59>XP_005261097 Length = 1452 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 STVIWL 7 +TVIWL Sbjct: 1271 TTVIWL 1276>XP_005261096 Length = 1591 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 STVIWL 7 +TVIWL Sbjct: 1271 TTVIWL 1276>XP_005261095 Length = 1591 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 STVIWL 7 +TVIWL Sbjct: 1271 TTVIWL 1276>XP_005261094 Length = 1591 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 STVIWL 7 +TVIWL Sbjct: 1271 TTVIWL 1276>XP_005250985 Length = 1406 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VSTVIWLL 8 VST +WL+ Sbjct: 1261 VSTGLWLM 1268>XP_006716634 Length = 1420 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VSTVIWLL 8 VST +WL+ Sbjct: 1275 VSTGLWLM 1282>XP_006714502 Length = 1064 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 VSTVIW 6 +STV+W Sbjct: 48 ISTVLW 53>XP_005246155 Length = 362 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VSTVIWLLA 9 V ++WLLA Sbjct: 164 VCILVWLLA 172>XP_006712703 Length = 362 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VSTVIWLLA 9 V ++WLLA Sbjct: 164 VCILVWLLA 172>XP_005246154 Length = 362 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VSTVIWLLA 9 V ++WLLA Sbjct: 164 VCILVWLLA 172>XP_006712699 Length = 1544 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VSTVIWLLA 9 V TV+WL + Sbjct: 19 VLTVLWLFS 27>XP_006712698 Length = 1547 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VSTVIWLLA 9 V TV+WL + Sbjct: 30 VLTVLWLFS 38>XP_006712697 Length = 1549 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VSTVIWLLA 9 V TV+WL + Sbjct: 24 VLTVLWLFS 32>NP_003741 Length = 1382 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 VSTVIW 6 VSTV W Sbjct: 279 VSTVFW 284>NP_060831 Length = 364 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 STVIWLLA 9 STV W++A Sbjct: 95 STVDWIVA 102>NP_005283 Length = 331 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 STVIWLLA 9 S +WLLA Sbjct: 106 SIALWLLA 113>NP_000557 Length = 374 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 VSTVIWL 7 V+TV+W+ Sbjct: 305 VNTVLWV 311>NP_001004340 Length = 188 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 VSTVIWL 7 V+TV+W+ Sbjct: 119 VNTVLWV 125>NP_001017986 Length = 280 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 VSTVIWL 7 V+TV+W+ Sbjct: 211 VNTVLWV 217>XP_006720009 Length = 331 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 STVIWLLA 9 S +WLLA Sbjct: 106 SIALWLLA 113>XP_005245015 Length = 282 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 VSTVIWL 7 V+TV+W+ Sbjct: 213 VNTVLWV 219>XP_005245014 Length = 375 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 VSTVIWL 7 V+TV+W+ Sbjct: 306 VNTVLWV 312>NP_001091670 Length = 331 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 STVIWLLA 9 S +WLLA Sbjct: 106 SIALWLLA 113>NP_001135780 Length = 2156 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 STVIW 6 STVIW Sbjct: 760 STVIW 764Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.331 0.133 0.453 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 574,100 Number of extensions: 563 Number of successful extensions: 55 Number of sequences better than 10000.0: 55 Number of HSP's gapped: 55 Number of HSP's successfully gapped: 55 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.3 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |