Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000305 20 509 XP_006717989 20 509 NP_001276324 17 2528 NP_003313 17 2528 NP_813977 17 2528 NP_003311 17 2528 XP_006718366 17 2528 XP_005253166 17 2528 NP_001003712 17 4312 NP_065892 17 4312 NP_001138537 17 4312 NP_055811 17 4312 XP_005268680 17 4312 XP_006719287 17 4312 XP_005268679 17 4312 XP_005268678 17 4312 XP_006719286 17 4312 XP_006719285 17 4312 XP_005247296 17 4312 XP_006713604 17 4312 XP_005247295 17 4312 NP_001124432 17 4312 NP_004915 16 5631 NP_001265273 16 5631 NP_001094 16 5631 NP_001265272 16 5631 NP_001093 16 5631 NP_001123477 16 5631 NP_001123476 16 5631 NP_001135753 16 5631 NP_055640 16 5631 XP_005259339 16 5631 XP_005259338 16 5631 XP_006723469 16 5631 XP_005271599 16 5631 NP_689644 16 5631 NP_001646 16 5631 NP_001245300 16 7355 NP_001095 16 7355 NP_001161710 16 7355 NP_001161709 16 7355 NP_001161708 16 7355 NP_006548 16 7355 NP_009298 16 7355 NP_870987 16 7355 NP_005149 16 7355 NP_001161711 16 7355 NP_001124337 16 7355 XP_005251411 16 7355 XP_005251409 16 7355 XP_005251408 16 7355 XP_006716780 16 7355 XP_005245145 16 7355 NP_001129472 16 7355 NP_001001331 15 9605 NP_003310 15 9605 NP_597676 15 9605 NP_001243779 15 9605 NP_596869 15 9605 NP_006495 15 9605 XP_006718528 15 9605 XP_006717995 15 9605 XP_005252749 15 9605 XP_005252748 15 9605 XP_006713243 15 9605 XP_006713242 15 9605 XP_006713239 15 9605 XP_005265236 15 9605 XP_006713238 15 9605 XP_005246888 15 9605 XP_006712788 15 9605 XP_006712787 15 9605 XP_006712786 15 9605 NP_569119 15 9605 NP_001254479 15 9605 NP_597681 15 9605>NP_000305 Length = 403 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VSTRDKKGV 9 V TRDKKGV Sbjct: 158 VRTRDKKGV 166>XP_006717989 Length = 388 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VSTRDKKGV 9 V TRDKKGV Sbjct: 143 VRTRDKKGV 151>NP_001276324 Length = 489 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 TRDKKGV 9 TRDKKG+ Sbjct: 257 TRDKKGM 263>NP_003313 Length = 542 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 TRDKKGV 9 TRDKKG+ Sbjct: 310 TRDKKGM 316>NP_813977 Length = 506 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 TRDKKGV 9 TRDKKG+ Sbjct: 270 TRDKKGM 276>NP_003311 Length = 561 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 TRDKKGV 9 TRDKKG+ Sbjct: 325 TRDKKGM 331>XP_006718366 Length = 451 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 TRDKKGV 9 TRDKKG+ Sbjct: 312 TRDKKGM 318>XP_005253166 Length = 548 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 TRDKKGV 9 TRDKKG+ Sbjct: 312 TRDKKGM 318>NP_001003712 Length = 847 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 STRDKKGV 9 STR KKG+ Sbjct: 776 STRRKKGI 783>NP_065892 Length = 889 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 STRDKKGV 9 STR KKG+ Sbjct: 818 STRRKKGI 825>NP_001138537 Length = 900 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VSTRDKKGV 9 +STRD+K + Sbjct: 751 LSTRDRKAI 759>NP_055811 Length = 1655 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 RDKKGV 9 RDKKGV Sbjct: 1486 RDKKGV 1491>XP_005268680 Length = 847 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 STRDKKGV 9 STR KKG+ Sbjct: 776 STRRKKGI 783>XP_006719287 Length = 847 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 STRDKKGV 9 STR KKG+ Sbjct: 776 STRRKKGI 783>XP_005268679 Length = 886 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 STRDKKGV 9 STR KKG+ Sbjct: 815 STRRKKGI 822>XP_005268678 Length = 889 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 STRDKKGV 9 STR KKG+ Sbjct: 818 STRRKKGI 825>XP_006719286 Length = 909 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 STRDKKGV 9 STR KKG+ Sbjct: 838 STRRKKGI 845>XP_006719285 Length = 912 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 STRDKKGV 9 STR KKG+ Sbjct: 841 STRRKKGI 848>XP_005247296 Length = 1673 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 RDKKGV 9 RDKKGV Sbjct: 1504 RDKKGV 1509>XP_006713604 Length = 1685 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 RDKKGV 9 RDKKGV Sbjct: 1516 RDKKGV 1521>XP_005247295 Length = 1705 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 RDKKGV 9 RDKKGV Sbjct: 1536 RDKKGV 1541>NP_001124432 Length = 1693 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 RDKKGV 9 RDKKGV Sbjct: 1524 RDKKGV 1529>NP_004915 Length = 911 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VSTRDKKGV 9 + TRD KG+ Sbjct: 754 ILTRDAKGI 762>NP_001265273 Length = 686 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VSTRDKKGV 9 + TRD KG+ Sbjct: 534 ILTRDAKGI 542>NP_001094 Length = 894 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VSTRDKKGV 9 + TRD KG+ Sbjct: 742 ILTRDAKGI 750>NP_001265272 Length = 894 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VSTRDKKGV 9 + TRD KG+ Sbjct: 742 ILTRDAKGI 750>NP_001093 Length = 892 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VSTRDKKGV 9 + TRD KG+ Sbjct: 735 ILTRDAKGI 743>NP_001123477 Length = 887 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VSTRDKKGV 9 + TRD KG+ Sbjct: 735 ILTRDAKGI 743>NP_001123476 Length = 914 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VSTRDKKGV 9 + TRD KG+ Sbjct: 735 ILTRDAKGI 743>NP_001135753 Length = 423 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 VSTRDKKGV 9 V DKKGV Sbjct: 229 VENEDKKGV 237>NP_055640 Length = 2271 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VSTRDKKGV 9 V+ RD KGV Sbjct: 183 VTKRDSKGV 191>XP_005259339 Length = 906 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VSTRDKKGV 9 + TRD KG+ Sbjct: 754 ILTRDAKGI 762>XP_005259338 Length = 906 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VSTRDKKGV 9 + TRD KG+ Sbjct: 754 ILTRDAKGI 762>XP_006723469 Length = 911 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VSTRDKKGV 9 + TRD KG+ Sbjct: 754 ILTRDAKGI 762>XP_005271599 Length = 417 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 VSTRDKKGV 9 V DKKGV Sbjct: 317 VENEDKKGV 325>NP_689644 Length = 852 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VSTRDKKGV 9 +ST DK G+ Sbjct: 52 ISTNDKYGI 60>NP_001646 Length = 511 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 VSTRDKKGV 9 V DKKGV Sbjct: 317 VENEDKKGV 325>NP_001245300 Length = 944 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VSTRDKKGV 9 V TRD KG+ Sbjct: 792 VLTRDAKGL 800>NP_001095 Length = 901 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VSTRDKKGV 9 V TRD KG+ Sbjct: 749 VLTRDAKGL 757>NP_001161710 Length = 1058 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 TRDKKG 8 TRD+KG Sbjct: 624 TRDRKG 629>NP_001161709 Length = 1079 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 TRDKKG 8 TRD+KG Sbjct: 645 TRDRKG 650>NP_001161708 Length = 1161 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 TRDKKG 8 TRD+KG Sbjct: 624 TRDRKG 629>NP_006548 Length = 226 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 STRDKKGV 9 +T DKKG+ Sbjct: 173 ATEDKKGL 180>NP_009298 Length = 1182 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 TRDKKG 8 TRD+KG Sbjct: 645 TRDRKG 650>NP_870987 Length = 561 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 STRDKKGV 9 +T DKKG+ Sbjct: 173 ATEDKKGL 180>NP_005149 Length = 1167 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 TRDKKG 8 TRD+KG Sbjct: 630 TRDRKG 635>NP_001161711 Length = 1043 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 TRDKKG 8 TRD+KG Sbjct: 609 TRDRKG 614>NP_001124337 Length = 226 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 STRDKKGV 9 +T DKKG+ Sbjct: 173 ATEDKKGL 180>XP_005251411 Length = 226 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 STRDKKGV 9 +T DKKG+ Sbjct: 173 ATEDKKGL 180>XP_005251409 Length = 561 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 STRDKKGV 9 +T DKKG+ Sbjct: 173 ATEDKKGL 180>XP_005251408 Length = 561 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 STRDKKGV 9 +T DKKG+ Sbjct: 173 ATEDKKGL 180>XP_006716780 Length = 561 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 STRDKKGV 9 +T DKKG+ Sbjct: 173 ATEDKKGL 180>XP_005245145 Length = 1146 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 TRDKKG 8 TRD+KG Sbjct: 609 TRDRKG 614>NP_001129472 Length = 1064 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 TRDKKG 8 TRD+KG Sbjct: 630 TRDRKG 635>NP_001001331 Length = 1243 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RDKKGV 9 +DKKGV Sbjct: 299 KDKKGV 304>NP_003310 Length = 26926 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 STRDKKGV 9 +TRD +GV Sbjct: 21524 ATRDHRGV 21531>NP_597676 Length = 27051 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 STRDKKGV 9 +TRD +GV Sbjct: 21649 ATRDHRGV 21656>NP_001243779 Length = 34350 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 STRDKKGV 9 +TRD +GV Sbjct: 28948 ATRDHRGV 28955>NP_596869 Length = 33423 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 STRDKKGV 9 +TRD +GV Sbjct: 28021 ATRDHRGV 28028>NP_006495 Length = 700 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 VSTRDKK 7 VST DKK Sbjct: 79 VSTSDKK 85>XP_006718528 Length = 161 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 TRDKKG 8 TRDK+G Sbjct: 146 TRDKQG 151>XP_006717995 Length = 699 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 VSTRDKK 7 VST DKK Sbjct: 79 VSTSDKK 85>XP_005252749 Length = 700 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 VSTRDKK 7 VST DKK Sbjct: 79 VSTSDKK 85>XP_005252748 Length = 700 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 VSTRDKK 7 VST DKK Sbjct: 79 VSTSDKK 85>XP_006713243 Length = 1199 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RDKKGV 9 +DKKGV Sbjct: 299 KDKKGV 304>XP_006713242 Length = 1205 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RDKKGV 9 +DKKGV Sbjct: 299 KDKKGV 304>XP_006713239 Length = 1243 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RDKKGV 9 +DKKGV Sbjct: 299 KDKKGV 304>XP_005265236 Length = 1243 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RDKKGV 9 +DKKGV Sbjct: 299 KDKKGV 304>XP_006713238 Length = 1243 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RDKKGV 9 +DKKGV Sbjct: 299 KDKKGV 304>XP_005246888 Length = 22663 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 STRDKKGV 9 +TRD +GV Sbjct: 17261 ATRDHRGV 17268>XP_006712788 Length = 24022 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 STRDKKGV 9 +TRD +GV Sbjct: 18620 ATRDHRGV 18627>XP_006712787 Length = 33978 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 STRDKKGV 9 +TRD +GV Sbjct: 28576 ATRDHRGV 28583>XP_006712786 Length = 35484 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 STRDKKGV 9 +TRD +GV Sbjct: 30082 ATRDHRGV 30089>NP_569119 Length = 642 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 VSTRDKK 7 VST DKK Sbjct: 21 VSTSDKK 27>NP_001254479 Length = 35991 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 STRDKKGV 9 +TRD +GV Sbjct: 30589 ATRDHRGV 30596>NP_597681 Length = 27118 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 STRDKKGV 9 +TRD +GV Sbjct: 21716 ATRDHRGV 21723Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.306 0.125 0.321 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 511,462 Number of extensions: 612 Number of successful extensions: 76 Number of sequences better than 10000.0: 76 Number of HSP's gapped: 76 Number of HSP's successfully gapped: 76 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.4 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |