Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_004445 18 1935 NP_036205 17 3301 NP_001244163 17 4312 NP_001244166 17 4312 NP_001244159 17 4312 NP_001244160 17 4312 NP_001093392 17 4312 XP_006724767 17 4312 XP_006724766 17 4312 XP_006724765 17 4312 XP_006724764 17 4312 XP_006724763 17 4312 XP_006724762 17 4312 XP_006724761 17 4312 XP_006724760 17 4312 XP_006724759 17 4312 XP_006724758 17 4312 XP_006724757 17 4312 XP_006724756 17 4312 NP_000042 16 5631 NP_001420 16 5631 NP_004371 16 5631 NP_001073315 16 5631 XP_006724228 16 5631 XP_005255182 16 5631 XP_006720911 16 5631 XP_005255181 16 5631 XP_006718908 16 5631 XP_005271621 16 5631 XP_006718907 16 5631 XP_006718906 16 5631 XP_005271619 16 5631 XP_005271618 16 5631 XP_006718366 16 5631 XP_005253166 16 5631 NP_001138462 16 7355 NP_001161437 16 7355 NP_689711 16 7355 NP_001182760 16 7355 NP_001127911 16 7355 NP_001127910 16 7355 NP_665696 16 7355 NP_079466 16 7355 XP_006712733 16 7355 XP_006712732 16 7355 XP_006712731 16 7355 XP_006712730 16 7355 XP_006712729 16 7355 XP_006712728 16 7355 XP_006712727 16 7355 XP_006712726 16 7355 XP_006712725 16 7355 XP_006712724 16 7355 XP_005264052 16 7355 XP_006710447 16 7355 XP_006710446 16 7355 XP_006710445 16 7355 XP_005270577 16 7355 NP_001127909 16 7355 NP_001008275 15 9605 NP_848563 15 9605 NP_689854 15 9605 NP_002509 15 9605 NP_940967 15 9605 XP_006726836 15 9605 XP_006723018 15 9605 XP_006719336 15 9605 XP_006719335 15 9605 XP_005264018 15 9605 XP_005264017 15 9605 XP_005264016 15 9605 XP_005264015 15 9605 XP_005264014 15 9605 XP_005264012 15 9605 XP_005264011 15 9605 XP_005264010 15 9605 XP_006710104 15 9605 NP_001180264 15 9605 NP_060150 15 9605>NP_004445 Length = 510 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 SSHRQMSE 9 S HRQMSE Sbjct: 242 SYHRQMSE 249>NP_036205 Length = 541 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SSHRQMSE 9 S HRQM+E Sbjct: 180 SCHRQMAE 187>NP_001244163 Length = 954 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SHRQMS 8 SHRQMS Sbjct: 598 SHRQMS 603>NP_001244166 Length = 954 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SHRQMS 8 SHRQMS Sbjct: 598 SHRQMS 603>NP_001244159 Length = 954 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SHRQMS 8 SHRQMS Sbjct: 598 SHRQMS 603>NP_001244160 Length = 1059 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SHRQMS 8 SHRQMS Sbjct: 624 SHRQMS 629>NP_001093392 Length = 1137 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SHRQMS 8 SHRQMS Sbjct: 702 SHRQMS 707>XP_006724767 Length = 641 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SHRQMS 8 SHRQMS Sbjct: 206 SHRQMS 211>XP_006724766 Length = 645 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SHRQMS 8 SHRQMS Sbjct: 210 SHRQMS 215>XP_006724765 Length = 652 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SHRQMS 8 SHRQMS Sbjct: 217 SHRQMS 222>XP_006724764 Length = 861 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SHRQMS 8 SHRQMS Sbjct: 702 SHRQMS 707>XP_006724763 Length = 901 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SHRQMS 8 SHRQMS Sbjct: 702 SHRQMS 707>XP_006724762 Length = 903 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SHRQMS 8 SHRQMS Sbjct: 702 SHRQMS 707>XP_006724761 Length = 1033 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SHRQMS 8 SHRQMS Sbjct: 598 SHRQMS 603>XP_006724760 Length = 1033 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SHRQMS 8 SHRQMS Sbjct: 598 SHRQMS 603>XP_006724759 Length = 1033 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SHRQMS 8 SHRQMS Sbjct: 598 SHRQMS 603>XP_006724758 Length = 1058 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SHRQMS 8 SHRQMS Sbjct: 702 SHRQMS 707>XP_006724757 Length = 1080 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SHRQMS 8 SHRQMS Sbjct: 645 SHRQMS 650>XP_006724756 Length = 1124 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SHRQMS 8 SHRQMS Sbjct: 702 SHRQMS 707>NP_000042 Length = 3056 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SHRQMSE 9 +HRQ+SE Sbjct: 2194 THRQLSE 2200>NP_001420 Length = 2414 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SSHRQMSE 9 S H+Q+SE Sbjct: 76 SKHKQLSE 83>NP_004371 Length = 2442 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SSHRQMSE 9 S H+Q+SE Sbjct: 65 SKHKQLSE 72>NP_001073315 Length = 2404 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SSHRQMSE 9 S H+Q+SE Sbjct: 65 SKHKQLSE 72>XP_006724228 Length = 2388 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SSHRQMSE 9 S H+Q+SE Sbjct: 76 SKHKQLSE 83>XP_005255182 Length = 2303 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SSHRQMSE 9 S H+Q+SE Sbjct: 65 SKHKQLSE 72>XP_006720911 Length = 2355 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SSHRQMSE 9 S H+Q+SE Sbjct: 65 SKHKQLSE 72>XP_005255181 Length = 2427 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SSHRQMSE 9 S H+Q+SE Sbjct: 65 SKHKQLSE 72>XP_006718908 Length = 1708 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SHRQMSE 9 +HRQ+SE Sbjct: 846 THRQLSE 852>XP_005271621 Length = 2708 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SHRQMSE 9 +HRQ+SE Sbjct: 1846 THRQLSE 1852>XP_006718907 Length = 3050 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SHRQMSE 9 +HRQ+SE Sbjct: 2188 THRQLSE 2194>XP_006718906 Length = 3056 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SHRQMSE 9 +HRQ+SE Sbjct: 2194 THRQLSE 2200>XP_005271619 Length = 3056 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SHRQMSE 9 +HRQ+SE Sbjct: 2194 THRQLSE 2200>XP_005271618 Length = 3056 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SHRQMSE 9 +HRQ+SE Sbjct: 2194 THRQLSE 2200>XP_006718366 Length = 451 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VSSHRQMS 8 VSSHR +S Sbjct: 40 VSSHRTLS 47>XP_005253166 Length = 548 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VSSHRQMS 8 VSSHR +S Sbjct: 40 VSSHRTLS 47>NP_001138462 Length = 1742 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SHRQMSE 9 +HR+MSE Sbjct: 830 NHRKMSE 836>NP_001161437 Length = 698 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 SSHRQMS 8 SSH QMS Sbjct: 275 SSHSQMS 281>NP_689711 Length = 698 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 SSHRQMS 8 SSH QMS Sbjct: 275 SSHSQMS 281>NP_001182760 Length = 1283 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 SSHRQMS 8 SSH QMS Sbjct: 275 SSHSQMS 281>NP_001127911 Length = 1253 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SHRQMSE 9 +H+QMSE Sbjct: 960 NHQQMSE 966>NP_001127910 Length = 1253 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SHRQMSE 9 +H+QMSE Sbjct: 960 NHQQMSE 966>NP_665696 Length = 1210 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SHRQMSE 9 +H+QMSE Sbjct: 917 NHQQMSE 923>NP_079466 Length = 1353 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VSSHRQMS 8 VSSH+Q S Sbjct: 527 VSSHKQPS 534>XP_006712733 Length = 759 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VSSHRQMS 8 VSSH+Q S Sbjct: 527 VSSHKQPS 534>XP_006712732 Length = 938 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VSSHRQMS 8 VSSH+Q S Sbjct: 527 VSSHKQPS 534>XP_006712731 Length = 1102 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VSSHRQMS 8 VSSH+Q S Sbjct: 276 VSSHKQPS 283>XP_006712730 Length = 1106 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VSSHRQMS 8 VSSH+Q S Sbjct: 280 VSSHKQPS 287>XP_006712729 Length = 1121 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VSSHRQMS 8 VSSH+Q S Sbjct: 295 VSSHKQPS 302>XP_006712728 Length = 1307 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VSSHRQMS 8 VSSH+Q S Sbjct: 481 VSSHKQPS 488>XP_006712727 Length = 1319 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VSSHRQMS 8 VSSH+Q S Sbjct: 493 VSSHKQPS 500>XP_006712726 Length = 1319 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VSSHRQMS 8 VSSH+Q S Sbjct: 527 VSSHKQPS 534>XP_006712725 Length = 1352 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VSSHRQMS 8 VSSH+Q S Sbjct: 527 VSSHKQPS 534>XP_006712724 Length = 1353 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VSSHRQMS 8 VSSH+Q S Sbjct: 527 VSSHKQPS 534>XP_005264052 Length = 1353 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VSSHRQMS 8 VSSH+Q S Sbjct: 527 VSSHKQPS 534>XP_006710447 Length = 1192 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 SSHRQMS 8 SSH QMS Sbjct: 275 SSHSQMS 281>XP_006710446 Length = 1239 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 SSHRQMS 8 SSH QMS Sbjct: 264 SSHSQMS 270>XP_006710445 Length = 1250 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 SSHRQMS 8 SSH QMS Sbjct: 275 SSHSQMS 281>XP_005270577 Length = 1250 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 SSHRQMS 8 SSH QMS Sbjct: 275 SSHSQMS 281>NP_001127909 Length = 1237 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SHRQMSE 9 +H+QMSE Sbjct: 944 NHQQMSE 950>NP_001008275 Length = 477 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VSSHRQMSE 9 V +H+Q+SE Sbjct: 334 VVAHQQLSE 342>NP_848563 Length = 747 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SSHRQMSE 9 S HRQ+S+ Sbjct: 393 SLHRQLSD 400>NP_689854 Length = 1835 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SSHRQMSE 9 SSH+ +SE Sbjct: 473 SSHQMLSE 480>NP_002509 Length = 824 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 SSHRQMSE 9 SSH MSE Sbjct: 418 SSHTAMSE 425>NP_940967 Length = 692 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 SHRQMSE 9 SH Q+SE Sbjct: 384 SHNQLSE 390>XP_006726836 Length = 372 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VSSHRQMSE 9 VSSHR S+ Sbjct: 317 VSSHRLSSQ 325>XP_006723018 Length = 372 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VSSHRQMSE 9 VSSHR S+ Sbjct: 317 VSSHRLSSQ 325>XP_006719336 Length = 1779 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SSHRQMSE 9 SSH+ +SE Sbjct: 417 SSHQMLSE 424>XP_006719335 Length = 1793 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SSHRQMSE 9 SSH+ +SE Sbjct: 473 SSHQMLSE 480>XP_005264018 Length = 700 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 SSHRQMSE 9 SSH MSE Sbjct: 294 SSHTAMSE 301>XP_005264017 Length = 786 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 SSHRQMSE 9 SSH MSE Sbjct: 380 SSHTAMSE 387>XP_005264016 Length = 835 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 SSHRQMSE 9 SSH MSE Sbjct: 483 SSHTAMSE 490>XP_005264015 Length = 838 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 SSHRQMSE 9 SSH MSE Sbjct: 432 SSHTAMSE 439>XP_005264014 Length = 851 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 SSHRQMSE 9 SSH MSE Sbjct: 445 SSHTAMSE 452>XP_005264012 Length = 854 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 SSHRQMSE 9 SSH MSE Sbjct: 448 SSHTAMSE 455>XP_005264011 Length = 888 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 SSHRQMSE 9 SSH MSE Sbjct: 483 SSHTAMSE 490>XP_005264010 Length = 889 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 SSHRQMSE 9 SSH MSE Sbjct: 483 SSHTAMSE 490>XP_006710104 Length = 372 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VSSHRQMSE 9 VSSHR S+ Sbjct: 317 VSSHRLSSQ 325>NP_001180264 Length = 242 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 SHRQMSE 9 SH Q+SE Sbjct: 157 SHNQLSE 163>NP_060150 Length = 379 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 SHRQMSE 9 SH Q+SE Sbjct: 157 SHNQLSE 163Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.302 0.103 0.250 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 585,733 Number of extensions: 681 Number of successful extensions: 79 Number of sequences better than 10000.0: 79 Number of HSP's gapped: 79 Number of HSP's successfully gapped: 79 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.5 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |