Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_006197 19 665 XP_006714104 19 665 XP_005265800 19 665 XP_006714103 19 665 XP_006714102 19 665 NP_036433 17 2528 XP_005250782 17 2528 NP_001258940 17 4312 NP_001158159 17 4312 NP_055041 17 4312 NP_001158157 17 4312 XP_006725081 17 4312 XP_006725080 17 4312 XP_006720289 17 4312 XP_006720288 17 4312 XP_006715539 17 4312 XP_005267031 17 4312 NP_001010923 17 4312 NP_870987 16 5631 XP_006716781 16 5631 XP_005251409 16 5631 XP_005251408 16 5631 XP_006716780 16 5631 NP_001185928 16 7355 NP_705872 16 7355 NP_705871 16 7355 NP_055501 16 7355 NP_079242 16 7355 NP_705870 16 7355 NP_705869 16 7355 NP_065909 16 7355 XP_005259501 16 7355 XP_005254747 16 7355 XP_005254746 16 7355 XP_005254745 16 7355 XP_005254744 16 7355 XP_005254743 16 7355 XP_005254742 16 7355 XP_006712812 16 7355 XP_005263827 16 7355 XP_005263826 16 7355 XP_005263825 16 7355 XP_005263824 16 7355 XP_006712811 16 7355 XP_001718723 16 7355 NP_078821 16 7355 NP_001139400 16 7355 NP_000634 15 9605 NP_000635 15 9605 NP_000636 15 9605 NP_000019 15 9605 NP_000637 15 9605 NP_000633 15 9605 NP_006111 15 9605 NP_001271268 15 9605 NP_940682 15 9605 NP_001271267 15 9605 NP_001271269 15 9605 NP_001186867 15 9605 NP_110420 15 9605 NP_056508 15 9605 XP_006714896 15 9605 XP_006714860 15 9605 XP_006714859 15 9605 XP_005268570 15 9605 XP_005270614 15 9605 NP_079429 15 9605 NP_071405 15 9605>NP_006197 Length = 1089 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VSRQYPMSE 9 VS QYPMSE Sbjct: 55 VSWQYPMSE 63>XP_006714104 Length = 832 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VSRQYPMSE 9 VS QYPMSE Sbjct: 80 VSWQYPMSE 88>XP_005265800 Length = 1089 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VSRQYPMSE 9 VS QYPMSE Sbjct: 55 VSWQYPMSE 63>XP_006714103 Length = 1111 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VSRQYPMSE 9 VS QYPMSE Sbjct: 77 VSWQYPMSE 85>XP_006714102 Length = 1114 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VSRQYPMSE 9 VS QYPMSE Sbjct: 80 VSWQYPMSE 88>NP_036433 Length = 1455 Score = 17.3 bits (33), Expect = 2528 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SRQYPMSE 9 +RQYP+S+ Sbjct: 1129 TRQYPLSD 1136>XP_005250782 Length = 1441 Score = 17.3 bits (33), Expect = 2528 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SRQYPMSE 9 +RQYP+S+ Sbjct: 1115 TRQYPLSD 1122>NP_001258940 Length = 389 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RQYPMSE 9 R+YP+SE Sbjct: 66 RRYPLSE 72>NP_001158159 Length = 606 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RQYPMSE 9 +QYP+SE Sbjct: 407 KQYPISE 413>NP_055041 Length = 419 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RQYPMSE 9 R+YP+SE Sbjct: 96 RRYPLSE 102>NP_001158157 Length = 680 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RQYPMSE 9 +QYP+SE Sbjct: 442 KQYPISE 448>XP_006725081 Length = 544 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RQYPMSE 9 +QYP+SE Sbjct: 345 KQYPISE 351>XP_006725080 Length = 606 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RQYPMSE 9 +QYP+SE Sbjct: 407 KQYPISE 413>XP_006720289 Length = 292 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RQYPMSE 9 R+YP+SE Sbjct: 96 RRYPLSE 102>XP_006720288 Length = 293 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RQYPMSE 9 R+YP+SE Sbjct: 96 RRYPLSE 102>XP_006715539 Length = 544 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RQYPMSE 9 +QYP+SE Sbjct: 345 KQYPISE 351>XP_005267031 Length = 606 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RQYPMSE 9 +QYP+SE Sbjct: 407 KQYPISE 413>NP_001010923 Length = 641 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RQYPMSE 9 +QYP+SE Sbjct: 442 KQYPISE 448>NP_870987 Length = 561 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 RQYPMS 8 RQYP+S Sbjct: 333 RQYPLS 338>XP_006716781 Length = 387 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 RQYPMS 8 RQYP+S Sbjct: 159 RQYPLS 164>XP_005251409 Length = 561 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 RQYPMS 8 RQYP+S Sbjct: 333 RQYPLS 338>XP_005251408 Length = 561 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 RQYPMS 8 RQYP+S Sbjct: 333 RQYPLS 338>XP_006716780 Length = 561 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 RQYPMS 8 RQYP+S Sbjct: 333 RQYPLS 338>NP_001185928 Length = 1011 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 SRQYPM 7 SRQYP+ Sbjct: 38 SRQYPV 43>NP_705872 Length = 597 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 SRQYPM 7 SRQYP+ Sbjct: 38 SRQYPV 43>NP_705871 Length = 1073 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 SRQYPM 7 SRQYP+ Sbjct: 38 SRQYPV 43>NP_055501 Length = 1070 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RQYPMSE 9 +QYPM E Sbjct: 30 QQYPMPE 36>NP_079242 Length = 476 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 SRQYPM 7 SRQYP+ Sbjct: 38 SRQYPV 43>NP_705870 Length = 1017 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 SRQYPM 7 SRQYP+ Sbjct: 38 SRQYPV 43>NP_705869 Length = 998 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 SRQYPM 7 SRQYP+ Sbjct: 38 SRQYPV 43>NP_065909 Length = 1011 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 SRQYPM 7 SRQYP+ Sbjct: 38 SRQYPV 43>XP_005259501 Length = 1070 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RQYPMSE 9 +QYPM E Sbjct: 30 QQYPMPE 36>XP_005254747 Length = 1030 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 SRQYPM 7 SRQYP+ Sbjct: 38 SRQYPV 43>XP_005254746 Length = 1054 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 SRQYPM 7 SRQYP+ Sbjct: 38 SRQYPV 43>XP_005254745 Length = 1067 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 SRQYPM 7 SRQYP+ Sbjct: 38 SRQYPV 43>XP_005254744 Length = 1073 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 SRQYPM 7 SRQYP+ Sbjct: 38 SRQYPV 43>XP_005254743 Length = 1086 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 SRQYPM 7 SRQYP+ Sbjct: 38 SRQYPV 43>XP_005254742 Length = 1086 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 SRQYPM 7 SRQYP+ Sbjct: 38 SRQYPV 43>XP_006712812 Length = 1047 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 RQYPMS 8 RQYP+S Sbjct: 515 RQYPVS 520>XP_005263827 Length = 1056 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 RQYPMS 8 RQYP+S Sbjct: 488 RQYPVS 493>XP_005263826 Length = 1057 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 RQYPMS 8 RQYP+S Sbjct: 489 RQYPVS 494>XP_005263825 Length = 1057 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 RQYPMS 8 RQYP+S Sbjct: 489 RQYPVS 494>XP_005263824 Length = 1082 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 RQYPMS 8 RQYP+S Sbjct: 514 RQYPVS 519>XP_006712811 Length = 1082 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 RQYPMS 8 RQYP+S Sbjct: 515 RQYPVS 520>XP_001718723 Length = 1091 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VSRQYPMS 8 V+R YPM+ Sbjct: 193 VTRTYPMT 200>NP_078821 Length = 1048 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 RQYPMS 8 RQYP+S Sbjct: 515 RQYPVS 520>NP_001139400 Length = 1083 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 RQYPMS 8 RQYP+S Sbjct: 515 RQYPVS 520>NP_000634 Length = 1532 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 VSRQYPMSE 9 VSR YP + Sbjct: 1179 VSRMYPTDD 1187>NP_000635 Length = 1532 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 VSRQYPMSE 9 VSR YP + Sbjct: 1179 VSRMYPTDD 1187>NP_000636 Length = 1515 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 VSRQYPMSE 9 VSR YP + Sbjct: 1162 VSRMYPTDD 1170>NP_000019 Length = 1532 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 VSRQYPMSE 9 VSR YP + Sbjct: 1179 VSRMYPTDD 1187>NP_000637 Length = 1516 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 VSRQYPMSE 9 VSR YP + Sbjct: 1163 VSRMYPTDD 1171>NP_000633 Length = 1532 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 VSRQYPMSE 9 VSR YP + Sbjct: 1179 VSRMYPTDD 1187>NP_006111 Length = 261 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VSRQYPMSE 9 VSR +P++E Sbjct: 122 VSRGFPIAE 130>NP_001271268 Length = 1303 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 SRQYPMSE 9 S YP+SE Sbjct: 14 SNTYPLSE 21>NP_940682 Length = 1247 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 SRQYPMSE 9 S YP+SE Sbjct: 14 SNTYPLSE 21>NP_001271267 Length = 1319 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 SRQYPMSE 9 S YP+SE Sbjct: 14 SNTYPLSE 21>NP_001271269 Length = 1302 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 SRQYPMSE 9 S YP+SE Sbjct: 14 SNTYPLSE 21>NP_001186867 Length = 366 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 SRQYP 6 SRQYP Sbjct: 36 SRQYP 40>NP_110420 Length = 1113 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 SRQYPMSE 9 S+Q+P+ E Sbjct: 660 SKQFPLEE 667>NP_056508 Length = 942 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 5 YPMSE 9 YPMSE Sbjct: 331 YPMSE 335>XP_006714896 Length = 1461 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 VSRQYP 6 VSR+YP Sbjct: 62 VSRRYP 67>XP_006714860 Length = 1146 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 SRQYPMSE 9 S+Q+P+ E Sbjct: 660 SKQFPLEE 667>XP_006714859 Length = 1188 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 SRQYPMSE 9 S+Q+P+ E Sbjct: 660 SKQFPLEE 667>XP_005268570 Length = 1188 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 SRQYPMSE 9 S+Q+P+ E Sbjct: 660 SKQFPLEE 667>XP_005270614 Length = 1532 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 VSRQYPMSE 9 VSR YP + Sbjct: 1179 VSRMYPTDD 1187>NP_079429 Length = 1461 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 VSRQYP 6 VSR+YP Sbjct: 62 VSRRYP 67>NP_071405 Length = 513 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 RQYPMSE 9 R+YP+S+ Sbjct: 244 RKYPLSQ 250Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.309 0.119 0.321 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 551,778 Number of extensions: 722 Number of successful extensions: 68 Number of sequences better than 10000.0: 68 Number of HSP's gapped: 68 Number of HSP's successfully gapped: 68 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |