Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000305 19 869 XP_006717990 19 869 XP_006717989 19 869 NP_006837 17 4312 NP_001121675 17 4312 NP_009000 17 4312 XP_006718489 17 4312 NP_001121170 17 4312 NP_001121171 17 4312 NP_004123 16 5631 NP_689777 16 5631 NP_060360 16 5631 NP_001171131 16 5631 NP_071328 16 5631 NP_001002909 16 5631 XP_005260633 16 5631 XP_006721846 16 5631 XP_006721845 16 5631 XP_006721844 16 5631 XP_006716779 16 5631 XP_006716573 16 5631 XP_005250858 16 5631 XP_005250857 16 5631 XP_005272199 16 5631 XP_006714215 16 5631 XP_006714214 16 5631 XP_005262915 16 5631 NP_055806 16 5631 NP_055644 16 5631 NP_001017420 16 7355 NP_005434 16 7355 NP_004661 16 7355 NP_001074003 16 7355 NP_001015880 16 7355 XP_005254452 16 7355 XP_005254451 16 7355 XP_006716360 16 7355 NP_997235 15 9605 NP_003850 15 9605 NP_001264243 15 9605 NP_001277935 15 9605 NP_073568 15 9605 NP_055554 15 9605 NP_001264242 15 9605 NP_001070909 15 9605 NP_001009565 15 9605 XP_005260659 15 9605 XP_005260658 15 9605 XP_005260657 15 9605 XP_005267295 15 9605 XP_005267294 15 9605 XP_005267293 15 9605 XP_006714247 15 9605 XP_005262992 15 9605 XP_006712066 15 9605 XP_005245510 15 9605 XP_005245422 15 9605 NP_065821 15 9605 NP_001070908 15 9605>NP_000305 Length = 403 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VSRNKRRSQ 9 VSRNKRR Q Sbjct: 9 VSRNKRRYQ 17>XP_006717990 Length = 175 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VSRNKRRSQ 9 VSRNKRR Q Sbjct: 9 VSRNKRRYQ 17>XP_006717989 Length = 388 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VSRNKRRSQ 9 VSRNKRR Q Sbjct: 9 VSRNKRRYQ 17>NP_006837 Length = 1064 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 SRNKRRSQ 9 SRNKR+S+ Sbjct: 421 SRNKRQSK 428>NP_001121675 Length = 162 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SRNKRRSQ 9 SRNKR+ Q Sbjct: 155 SRNKRQKQ 162>NP_009000 Length = 162 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SRNKRRSQ 9 SRNKR+ Q Sbjct: 155 SRNKRQKQ 162>XP_006718489 Length = 162 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SRNKRRSQ 9 SRNKR+ Q Sbjct: 155 SRNKRQKQ 162>NP_001121170 Length = 1094 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 SRNKRRSQ 9 SRNKR+S+ Sbjct: 421 SRNKRQSK 428>NP_001121171 Length = 916 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 SRNKRRSQ 9 SRNKR+S+ Sbjct: 421 SRNKRQSK 428>NP_004123 Length = 560 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 SRNKRRSQ 9 SR+KRRS+ Sbjct: 166 SRHKRRSK 173>NP_689777 Length = 3997 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SRNKRRS 8 SRN+RRS Sbjct: 1442 SRNERRS 1448>NP_060360 Length = 4022 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SRNKRRS 8 SRN+RRS Sbjct: 1467 SRNERRS 1473>NP_001171131 Length = 534 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 SRNKRRSQ 9 SR+KRRS+ Sbjct: 140 SRHKRRSK 147>NP_071328 Length = 904 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 VSRNKRRSQ 9 VSR KRRS+ Sbjct: 731 VSRLKRRSK 739>NP_001002909 Length = 1502 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 SRNKRRSQ 9 SR+KRRS+ Sbjct: 968 SRSKRRSR 975>XP_005260633 Length = 1364 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SRNKRR 7 SRNKRR Sbjct: 3 SRNKRR 8>XP_006721846 Length = 1424 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 SRNKRRSQ 9 SR+KRRS+ Sbjct: 890 SRSKRRSR 897>XP_006721845 Length = 1424 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 SRNKRRSQ 9 SR+KRRS+ Sbjct: 890 SRSKRRSR 897>XP_006721844 Length = 1424 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 SRNKRRSQ 9 SR+KRRS+ Sbjct: 890 SRSKRRSR 897>XP_006716779 Length = 2399 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VSRNKRRSQ 9 ++RNKR+ Q Sbjct: 409 LTRNKRKKQ 417>XP_006716573 Length = 1776 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SRNKRRS 8 SRN+RRS Sbjct: 1467 SRNERRS 1473>XP_005250858 Length = 4022 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SRNKRRS 8 SRN+RRS Sbjct: 1467 SRNERRS 1473>XP_005250857 Length = 4022 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SRNKRRS 8 SRN+RRS Sbjct: 1467 SRNERRS 1473>XP_005272199 Length = 1032 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 SRNKRRSQ 9 SR+KRRS+ Sbjct: 54 SRDKRRSR 61>XP_006714215 Length = 3544 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 VSRNKRRSQ 9 ++++KRRSQ Sbjct: 2094 IAQSKRRSQ 2102>XP_006714214 Length = 3544 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 VSRNKRRSQ 9 ++++KRRSQ Sbjct: 2094 IAQSKRRSQ 2102>XP_005262915 Length = 3544 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 VSRNKRRSQ 9 ++++KRRSQ Sbjct: 2094 IAQSKRRSQ 2102>NP_055806 Length = 3526 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 VSRNKRRSQ 9 ++++KRRSQ Sbjct: 2076 IAQSKRRSQ 2084>NP_055644 Length = 1031 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 SRNKRRSQ 9 SR+KRRS+ Sbjct: 54 SRDKRRSR 61>NP_001017420 Length = 601 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VSRNKRRSQ 9 VSRN R S+ Sbjct: 158 VSRNSRNSK 166>NP_005434 Length = 624 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 VSRNKR 6 VSRNKR Sbjct: 35 VSRNKR 40>NP_004661 Length = 614 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 VSRNKR 6 VSRNKR Sbjct: 25 VSRNKR 30>NP_001074003 Length = 2214 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VSRNKRRSQ 9 V +NKRR++ Sbjct: 1249 VGKNKRRTK 1257>NP_001015880 Length = 619 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 VSRNKR 6 VSRNKR Sbjct: 25 VSRNKR 30>XP_005254452 Length = 2188 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VSRNKRRSQ 9 V +NKRR++ Sbjct: 1249 VGKNKRRTK 1257>XP_005254451 Length = 2214 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VSRNKRRSQ 9 V +NKRR++ Sbjct: 1249 VGKNKRRTK 1257>XP_006716360 Length = 601 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VSRNKRRSQ 9 VSRN R S+ Sbjct: 158 VSRNSRNSK 166>NP_997235 Length = 525 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 SRNKRRS 8 S+NKRR+ Sbjct: 292 SKNKRRA 298>NP_003850 Length = 260 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VSRNKRRSQ 9 VSR+ RRS+ Sbjct: 6 VSRSPRRSR 14>NP_001264243 Length = 662 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 SRNKRRS 8 +RNKRR+ Sbjct: 454 TRNKRRA 460>NP_001277935 Length = 392 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VSRNKRRSQ 9 VSRN RS+ Sbjct: 310 VSRNPMRSE 318>NP_073568 Length = 243 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 SRNKRRS 8 ++NKRRS Sbjct: 44 AKNKRRS 50>NP_055554 Length = 920 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SRNKRRSQ 9 SR+K RSQ Sbjct: 11 SRSKSRSQ 18>NP_001264242 Length = 1419 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 SRNKRRS 8 +RNKRR+ Sbjct: 454 TRNKRRA 460>NP_001070909 Length = 747 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SRNKRRSQ 9 SR+K RSQ Sbjct: 11 SRSKSRSQ 18>NP_001009565 Length = 315 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RNKRRSQ 9 RN+RR Q Sbjct: 303 RNRRRQQ 309>XP_005260659 Length = 189 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VSRNKRRSQ 9 VSR+ RRS+ Sbjct: 6 VSRSPRRSR 14>XP_005260658 Length = 237 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VSRNKRRSQ 9 VSR+ RRS+ Sbjct: 6 VSRSPRRSR 14>XP_005260657 Length = 287 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VSRNKRRSQ 9 VSR+ RRS+ Sbjct: 6 VSRSPRRSR 14>XP_005267295 Length = 642 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SRNKRRSQ 9 SR+K RSQ Sbjct: 11 SRSKSRSQ 18>XP_005267294 Length = 871 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SRNKRRSQ 9 SR+K RSQ Sbjct: 11 SRSKSRSQ 18>XP_005267293 Length = 918 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SRNKRRSQ 9 SR+K RSQ Sbjct: 11 SRSKSRSQ 18>XP_006714247 Length = 393 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 SRNKRRS 8 S+NKRR+ Sbjct: 160 SKNKRRA 166>XP_005262992 Length = 524 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 SRNKRRS 8 S+NKRR+ Sbjct: 292 SKNKRRA 298>XP_006712066 Length = 342 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RNKRRSQ 9 RN+RR Q Sbjct: 303 RNRRRQQ 309>XP_005245510 Length = 242 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 SRNKRRS 8 ++NKRRS Sbjct: 44 AKNKRRS 50>XP_005245422 Length = 1203 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SRNKRRSQ 9 + NK+RSQ Sbjct: 950 AENKKRSQ 957>NP_065821 Length = 1203 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SRNKRRSQ 9 + NK+RSQ Sbjct: 950 AENKKRSQ 957>NP_001070908 Length = 869 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SRNKRRSQ 9 SR+K RSQ Sbjct: 11 SRSKSRSQ 18Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.311 0.115 0.277 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 470,234 Number of extensions: 707 Number of successful extensions: 59 Number of sequences better than 10000.0: 59 Number of HSP's gapped: 59 Number of HSP's successfully gapped: 59 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.7 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |