Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000258 19 665 NP_001035957 19 665 XP_006721990 19 665 XP_006721989 19 665 XP_005258041 19 665 XP_006721988 19 665 XP_006721987 19 665 XP_006721986 19 665 XP_005258040 19 665 XP_006721985 19 665 NP_001561 17 3301 NP_001020414 17 4312 NP_001020413 17 4312 NP_001560 17 4312 XP_005274725 17 4312 NP_000086 16 5631 NP_660186 16 5631 NP_149094 16 5631 NP_055753 16 5631 XP_005272547 16 5631 XP_005272546 16 5631 XP_006722863 16 5631 XP_006719357 16 5631 XP_006719356 16 5631 XP_006719355 16 5631 XP_006719354 16 5631 XP_006719353 16 5631 NP_003001 16 7355 NP_001268364 16 7355 NP_001013725 16 7355 NP_065962 16 7355 NP_002510 16 7355 XP_005256812 16 7355 XP_006721631 16 7355 XP_005256810 16 7355 XP_005254450 16 7355 XP_005254449 16 7355 XP_005250743 16 7355 XP_006716234 16 7355 NP_002817 15 9605 NP_001004128 15 9605 NP_006862 15 9605 NP_055572 15 9605 NP_620590 15 9605 NP_056284 15 9605 NP_060846 15 9605 XP_006725141 15 9605 XP_006725140 15 9605 XP_006716592 15 9605 XP_006716591 15 9605>NP_000258 Length = 2818 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 VSQSNVLLD 9 VS+SNVLLD Sbjct: 2577 VSESNVLLD 2585>NP_001035957 Length = 2839 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 VSQSNVLLD 9 VS+SNVLLD Sbjct: 2598 VSESNVLLD 2606>XP_006721990 Length = 2823 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 VSQSNVLLD 9 VS+SNVLLD Sbjct: 2608 VSESNVLLD 2616>XP_006721989 Length = 2823 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 VSQSNVLLD 9 VS+SNVLLD Sbjct: 2608 VSESNVLLD 2616>XP_005258041 Length = 2836 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 VSQSNVLLD 9 VS+SNVLLD Sbjct: 2577 VSESNVLLD 2585>XP_006721988 Length = 2846 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 VSQSNVLLD 9 VS+SNVLLD Sbjct: 2587 VSESNVLLD 2595>XP_006721987 Length = 2849 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 VSQSNVLLD 9 VS+SNVLLD Sbjct: 2608 VSESNVLLD 2616>XP_006721986 Length = 2854 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 VSQSNVLLD 9 VS+SNVLLD Sbjct: 2595 VSESNVLLD 2603>XP_005258040 Length = 2857 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 VSQSNVLLD 9 VS+SNVLLD Sbjct: 2598 VSESNVLLD 2606>XP_006721985 Length = 2867 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 VSQSNVLLD 9 VS+SNVLLD Sbjct: 2608 VSESNVLLD 2616>NP_001561 Length = 625 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 VSQSNVLLD 9 V SNVLLD Sbjct: 336 VKSSNVLLD 344>NP_001020414 Length = 633 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VSQSNVLLD 9 + SNVLLD Sbjct: 341 IKSSNVLLD 349>NP_001020413 Length = 682 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VSQSNVLLD 9 + SNVLLD Sbjct: 341 IKSSNVLLD 349>NP_001560 Length = 712 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VSQSNVLLD 9 + SNVLLD Sbjct: 341 IKSSNVLLD 349>XP_005274725 Length = 708 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VSQSNVLLD 9 + SNVLLD Sbjct: 367 IKSSNVLLD 375>NP_000086 Length = 757 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VSQSNVLLD 9 V+ SNV+LD Sbjct: 706 VADSNVVLD 714>NP_660186 Length = 419 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VSQSNVLLD 9 V SN+LLD Sbjct: 244 VKPSNILLD 252>NP_149094 Length = 686 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VSQSNVLLD 9 VSQ N+LL+ Sbjct: 207 VSQQNLLLE 215>NP_055753 Length = 919 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 VSQSNVLL 8 VSQSNV++ Sbjct: 604 VSQSNVVI 611>XP_005272547 Length = 426 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VSQSNVLLD 9 V SN+LLD Sbjct: 244 VKPSNILLD 252>XP_005272546 Length = 435 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VSQSNVLLD 9 V SN+LLD Sbjct: 260 VKPSNILLD 268>XP_006722863 Length = 442 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VSQSNVLLD 9 V SN+LLD Sbjct: 260 VKPSNILLD 268>XP_006719357 Length = 567 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 VSQSNVLL 8 VSQSNV++ Sbjct: 211 VSQSNVVI 218>XP_006719356 Length = 708 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 VSQSNVLL 8 VSQSNV++ Sbjct: 604 VSQSNVVI 611>XP_006719355 Length = 920 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 VSQSNVLL 8 VSQSNV++ Sbjct: 604 VSQSNVVI 611>XP_006719354 Length = 959 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 VSQSNVLL 8 VSQSNV++ Sbjct: 604 VSQSNVVI 611>XP_006719353 Length = 960 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 VSQSNVLL 8 VSQSNV++ Sbjct: 604 VSQSNVVI 611>NP_003001 Length = 399 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VSQSNVLLD 9 + SN+LLD Sbjct: 230 IKPSNILLD 238>NP_001268364 Length = 410 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VSQSNVLLD 9 + SN+LLD Sbjct: 241 IKPSNILLD 249>NP_001013725 Length = 1649 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VSQSNVLLD 9 +S SNVL+D Sbjct: 426 LSASNVLVD 434>NP_065962 Length = 1894 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 VSQSNVLL 8 VSQ NVLL Sbjct: 570 VSQYNVLL 577>NP_002510 Length = 1427 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 VSQSNVLL 8 VSQSNV++ Sbjct: 882 VSQSNVVV 889>XP_005256812 Length = 253 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VSQSNVLLD 9 + SN+LLD Sbjct: 84 IKPSNILLD 92>XP_006721631 Length = 281 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VSQSNVLLD 9 + SN+LLD Sbjct: 112 IKPSNILLD 120>XP_005256810 Length = 281 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VSQSNVLLD 9 + SN+LLD Sbjct: 112 IKPSNILLD 120>XP_005254450 Length = 1505 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VSQSNVLLD 9 +S SNVL+D Sbjct: 426 LSASNVLVD 434>XP_005254449 Length = 1626 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VSQSNVLLD 9 +S SNVL+D Sbjct: 426 LSASNVLVD 434>XP_005250743 Length = 1894 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 VSQSNVLL 8 VSQ NVLL Sbjct: 570 VSQYNVLL 577>XP_006716234 Length = 1894 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 VSQSNVLL 8 VSQ NVLL Sbjct: 570 VSQYNVLL 577>NP_002817 Length = 747 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SQSNVLLD 9 S SN++LD Sbjct: 536 SPSNIILD 543>NP_001004128 Length = 604 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SQSNVLLD 9 S SN++LD Sbjct: 536 SPSNIILD 543>NP_006862 Length = 518 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 SNVLLD 9 SNVLLD Sbjct: 146 SNVLLD 151>NP_055572 Length = 1016 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VSQSNVLLD 9 +SQSN++ D Sbjct: 235 ISQSNLMPD 243>NP_620590 Length = 544 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 SNVLLD 9 SNVLLD Sbjct: 141 SNVLLD 146>NP_056284 Length = 247 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VSQSNVLL 8 VSQ N+LL Sbjct: 231 VSQQNMLL 238>NP_060846 Length = 247 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VSQSNVLL 8 VSQ N+LL Sbjct: 231 VSQQNMLL 238>XP_006725141 Length = 325 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 SNVLLD 9 SNVLLD Sbjct: 160 SNVLLD 165>XP_006725140 Length = 563 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 SNVLLD 9 SNVLLD Sbjct: 160 SNVLLD 165>XP_006716592 Length = 325 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 SNVLLD 9 SNVLLD Sbjct: 160 SNVLLD 165>XP_006716591 Length = 563 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 SNVLLD 9 SNVLLD Sbjct: 160 SNVLLD 165Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.307 0.124 0.289 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 330,335 Number of extensions: 354 Number of successful extensions: 50 Number of sequences better than 10000.0: 50 Number of HSP's gapped: 50 Number of HSP's successfully gapped: 50 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.4 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |