Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001257436 20 299 NP_001257437 20 299 NP_006281 20 299 XP_006715618 20 299 XP_005267176 20 299 NP_542411 17 3301 XP_006725001 17 3301 NP_057452 17 4312 NP_057417 17 4312 NP_443082 17 4312 XP_005255284 17 4312 XP_005255283 17 4312 XP_006720936 17 4312 XP_006720935 17 4312 XP_005255282 17 4312 NP_065880 16 5631 NP_001129392 16 5631 NP_001193486 16 5631 XP_005251580 16 5631 NP_115970 16 7355 NP_000616 16 7355 NP_001269356 16 7355 NP_001269355 16 7355 NP_002640 16 7355 NP_569056 16 7355 NP_001193809 16 7355 NP_001093633 16 7355 NP_001027449 16 7355 NP_077278 16 7355 NP_055061 16 7355 NP_001138722 16 7355 NP_001092049 16 7355 XP_006726574 16 7355 XP_006724446 16 7355 XP_005254186 16 7355 XP_005250500 16 7355 XP_006715862 16 7355 XP_005249952 16 7355 XP_005249951 16 7355 NP_003686 16 7355 NP_006456 16 7355 NP_001186692 15 9605 NP_001273897 15 9605 NP_005345 15 9605 NP_055990 15 9605 NP_002837 15 9605 NP_001186693 15 9605 NP_054865 15 9605 NP_115852 15 9605 NP_115853 15 9605 NP_065823 15 9605 NP_057279 15 9605 NP_001271188 15 9605 XP_005250619 15 9605 XP_006714541 15 9605 XP_005248375 15 9605 XP_005265050 15 9605 XP_005265049 15 9605 XP_006713135 15 9605 NP_060504 15 9605>NP_001257436 Length = 790 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 VSPTSSRFQ 9 VSPT+SRFQ Sbjct: 644 VSPTASRFQ 652>NP_001257437 Length = 790 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 VSPTSSRFQ 9 VSPT+SRFQ Sbjct: 644 VSPTASRFQ 652>NP_006281 Length = 790 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 VSPTSSRFQ 9 VSPT+SRFQ Sbjct: 644 VSPTASRFQ 652>XP_006715618 Length = 577 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 VSPTSSRFQ 9 VSPT+SRFQ Sbjct: 431 VSPTASRFQ 439>XP_005267176 Length = 790 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 VSPTSSRFQ 9 VSPT+SRFQ Sbjct: 644 VSPTASRFQ 652>NP_542411 Length = 1736 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VSPTSSRFQ 9 V PT+ RFQ Sbjct: 320 VPPTADRFQ 328>XP_006725001 Length = 387 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SPTSSRFQ 9 SPT+ RFQ Sbjct: 66 SPTTPRFQ 73>NP_057452 Length = 558 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VSPTSSRF 8 V PTS+RF Sbjct: 41 VHPTSTRF 48>NP_057417 Length = 2752 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VSPTSSRFQ 9 +SP SRFQ Sbjct: 1131 MSPEQSRFQ 1139>NP_443082 Length = 222 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VSPTSSRFQ 9 V P S+RFQ Sbjct: 168 VDPRSARFQ 176>XP_005255284 Length = 2581 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VSPTSSRFQ 9 +SP SRFQ Sbjct: 1131 MSPEQSRFQ 1139>XP_005255283 Length = 2751 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VSPTSSRFQ 9 +SP SRFQ Sbjct: 1131 MSPEQSRFQ 1139>XP_006720936 Length = 2751 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VSPTSSRFQ 9 +SP SRFQ Sbjct: 1130 MSPEQSRFQ 1138>XP_006720935 Length = 2752 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VSPTSSRFQ 9 +SP SRFQ Sbjct: 1131 MSPEQSRFQ 1139>XP_005255282 Length = 2752 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VSPTSSRFQ 9 +SP SRFQ Sbjct: 1131 MSPEQSRFQ 1139>NP_065880 Length = 1423 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VSPTSSRF 8 ++P SSRF Sbjct: 230 ITPVSSRF 237>NP_001129392 Length = 1165 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VSPTSSRF 8 ++P SSRF Sbjct: 230 ITPVSSRF 237>NP_001193486 Length = 1386 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VSPTSSRF 8 ++P SSRF Sbjct: 230 ITPVSSRF 237>XP_005251580 Length = 1422 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VSPTSSRF 8 ++P SSRF Sbjct: 229 ITPVSSRF 236>NP_115970 Length = 521 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VSPTSSR 7 ++PTSSR Sbjct: 305 ITPTSSR 311>NP_000616 Length = 1153 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SPTSSR 7 SPTSSR Sbjct: 745 SPTSSR 750>NP_001269356 Length = 1102 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 SPTSSRFQ 9 SPT +FQ Sbjct: 915 SPTEEKFQ 922>NP_001269355 Length = 1102 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 SPTSSRFQ 9 SPT +FQ Sbjct: 915 SPTEEKFQ 922>NP_002640 Length = 1102 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 SPTSSRFQ 9 SPT +FQ Sbjct: 915 SPTEEKFQ 922>NP_569056 Length = 912 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SPTSSR 7 SPTSSR Sbjct: 202 SPTSSR 207>NP_001193809 Length = 706 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SPTSSR 7 SPTSSR Sbjct: 202 SPTSSR 207>NP_001093633 Length = 821 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SPTSSR 7 SPTSSR Sbjct: 111 SPTSSR 116>NP_001027449 Length = 130 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 SPTSSRF 8 +PTS+RF Sbjct: 53 APTSTRF 59>NP_077278 Length = 520 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 SPTSSRF 8 +PTS+RF Sbjct: 53 APTSTRF 59>NP_055061 Length = 3014 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SPTSSR 7 SPTSSR Sbjct: 2960 SPTSSR 2965>NP_001138722 Length = 484 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 SPTSSRF 8 SPTSS F Sbjct: 95 SPTSSAF 101>NP_001092049 Length = 904 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SPTSSR 7 SPTSSR Sbjct: 193 SPTSSR 198>XP_006726574 Length = 446 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SPTSSR 7 SPTSSR Sbjct: 397 SPTSSR 402>XP_006724446 Length = 3019 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SPTSSR 7 SPTSSR Sbjct: 2960 SPTSSR 2965>XP_005254186 Length = 561 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SPTSSR 7 SPTSSR Sbjct: 543 SPTSSR 548>XP_005250500 Length = 1102 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 SPTSSRFQ 9 SPT +FQ Sbjct: 915 SPTEEKFQ 922>XP_006715862 Length = 346 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VSPTSSR 7 ++PTSSR Sbjct: 130 ITPTSSR 136>XP_005249952 Length = 406 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VSPTSSR 7 ++PTSSR Sbjct: 305 ITPTSSR 311>XP_005249951 Length = 419 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VSPTSSR 7 ++PTSSR Sbjct: 305 ITPTSSR 311>NP_003686 Length = 128 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 VSPTSSRF 8 V P SSRF Sbjct: 37 VCPASSRF 44>NP_006456 Length = 560 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SPTSSR 7 SPTSSR Sbjct: 542 SPTSSR 547>NP_001186692 Length = 950 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 SPTSSRFQ 9 SPTSS Q Sbjct: 415 SPTSSEVQ 422>NP_001273897 Length = 304 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 SPTSSRF 8 +PTSS+F Sbjct: 74 TPTSSQF 80>NP_005345 Length = 347 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 SPTSSRF 8 +PTSS+F Sbjct: 117 TPTSSQF 123>NP_055990 Length = 2754 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VSPTSSRFQ 9 V PT S+F+ Sbjct: 1718 VQPTMSQFE 1726>NP_002837 Length = 979 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 SPTSSRFQ 9 SPTSS Q Sbjct: 415 SPTSSEVQ 422>NP_001186693 Length = 889 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 SPTSSRFQ 9 SPTSS Q Sbjct: 325 SPTSSEVQ 332>NP_054865 Length = 243 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 PTSSRFQ 9 P SSR+Q Sbjct: 90 PASSRYQ 96>NP_115852 Length = 243 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 PTSSRFQ 9 P SSR+Q Sbjct: 90 PASSRYQ 96>NP_115853 Length = 243 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 PTSSRFQ 9 P SSR+Q Sbjct: 90 PASSRYQ 96>NP_065823 Length = 695 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 VSPTSS 6 VSPTSS Sbjct: 375 VSPTSS 380>NP_057279 Length = 1780 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 PTSSRFQ 9 P SS+FQ Sbjct: 289 PVSSKFQ 295>NP_001271188 Length = 1820 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 PTSSRFQ 9 P SS+FQ Sbjct: 289 PVSSKFQ 295>XP_005250619 Length = 243 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 PTSSRFQ 9 P SSR+Q Sbjct: 90 PASSRYQ 96>XP_006714541 Length = 387 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 VSPTSSR 7 + PTSSR Sbjct: 80 IEPTSSR 86>XP_005248375 Length = 653 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 VSPTSSR 7 + PTSSR Sbjct: 79 IEPTSSR 85>XP_005265050 Length = 1578 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VSPTSSRFQ 9 V PT S+F+ Sbjct: 542 VQPTMSQFE 550>XP_005265049 Length = 2720 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VSPTSSRFQ 9 V PT S+F+ Sbjct: 1684 VQPTMSQFE 1692>XP_006713135 Length = 2727 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VSPTSSRFQ 9 V PT S+F+ Sbjct: 1691 VQPTMSQFE 1699>NP_060504 Length = 654 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 VSPTSSR 7 + PTSSR Sbjct: 80 IEPTSSR 86Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.310 0.115 0.305 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 737,895 Number of extensions: 1121 Number of successful extensions: 60 Number of sequences better than 10000.0: 60 Number of HSP's gapped: 60 Number of HSP's successfully gapped: 60 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |