Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001006608 18 1935 NP_955372 18 1935 NP_055649 18 1935 XP_005275724 18 1935 XP_005275722 18 1935 XP_005275721 18 1935 XP_006725345 18 1935 XP_006725344 18 1935 XP_005275719 18 1935 XP_006725343 18 1935 XP_006725342 18 1935 XP_005275717 18 1935 XP_005275716 18 1935 XP_005257941 18 1935 XP_005257940 18 1935 XP_006722274 18 1935 XP_006722273 18 1935 XP_005257939 18 1935 XP_006722272 18 1935 XP_005257937 18 1935 XP_005257936 18 1935 XP_005257935 18 1935 XP_006722271 18 1935 NP_004110 17 2528 XP_006711469 17 3301 XP_005245352 17 3301 NP_542437 16 7355 NP_061197 16 7355 NP_542435 16 7355 NP_542436 16 7355 NP_003740 16 7355 NP_001276953 16 7355 NP_714912 16 7355 NP_001276952 16 7355 NP_005526 16 7355 XP_006722804 16 7355 NP_078966 15 9605 NP_004127 15 9605 NP_001186028 15 9605 NP_001186026 15 9605 NP_001186027 15 9605 NP_001186025 15 9605 NP_001273720 15 9605 NP_006107 15 9605 NP_001483 15 9605 NP_060501 15 9605 NP_003924 15 9605 NP_056453 15 9605 NP_079363 15 9605 NP_003176 15 9605 NP_955400 15 9605 NP_001273393 15 9605 XP_005259010 15 9605 XP_006714093 15 9605 XP_005248183 15 9605 XP_005264894 15 9605 NP_065172 15 9605>NP_001006608 Length = 1700 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 VSPSITLQV 9 VSPS+T+Q+ Sbjct: 602 VSPSVTVQL 610>NP_955372 Length = 1634 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 VSPSITLQV 9 VSPS+T+Q+ Sbjct: 602 VSPSVTVQL 610>NP_055649 Length = 1700 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 VSPSITLQV 9 VSPS+T+Q+ Sbjct: 602 VSPSVTVQL 610>XP_005275724 Length = 894 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 VSPSITLQV 9 VSPS+T+Q+ Sbjct: 602 VSPSVTVQL 610>XP_005275722 Length = 969 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 VSPSITLQV 9 VSPS+T+Q+ Sbjct: 602 VSPSVTVQL 610>XP_005275721 Length = 1018 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 VSPSITLQV 9 VSPS+T+Q+ Sbjct: 602 VSPSVTVQL 610>XP_006725345 Length = 1600 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 VSPSITLQV 9 VSPS+T+Q+ Sbjct: 602 VSPSVTVQL 610>XP_006725344 Length = 1606 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 VSPSITLQV 9 VSPS+T+Q+ Sbjct: 508 VSPSVTVQL 516>XP_005275719 Length = 1625 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 VSPSITLQV 9 VSPS+T+Q+ Sbjct: 602 VSPSVTVQL 610>XP_006725343 Length = 1635 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 VSPSITLQV 9 VSPS+T+Q+ Sbjct: 602 VSPSVTVQL 610>XP_006725342 Length = 1651 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 VSPSITLQV 9 VSPS+T+Q+ Sbjct: 602 VSPSVTVQL 610>XP_005275717 Length = 1665 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 VSPSITLQV 9 VSPS+T+Q+ Sbjct: 602 VSPSVTVQL 610>XP_005275716 Length = 1676 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 VSPSITLQV 9 VSPS+T+Q+ Sbjct: 602 VSPSVTVQL 610>XP_005257941 Length = 969 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 VSPSITLQV 9 VSPS+T+Q+ Sbjct: 602 VSPSVTVQL 610>XP_005257940 Length = 1018 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 VSPSITLQV 9 VSPS+T+Q+ Sbjct: 602 VSPSVTVQL 610>XP_006722274 Length = 1576 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 VSPSITLQV 9 VSPS+T+Q+ Sbjct: 602 VSPSVTVQL 610>XP_006722273 Length = 1600 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 VSPSITLQV 9 VSPS+T+Q+ Sbjct: 602 VSPSVTVQL 610>XP_005257939 Length = 1606 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 VSPSITLQV 9 VSPS+T+Q+ Sbjct: 508 VSPSVTVQL 516>XP_006722272 Length = 1635 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 VSPSITLQV 9 VSPS+T+Q+ Sbjct: 602 VSPSVTVQL 610>XP_005257937 Length = 1651 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 VSPSITLQV 9 VSPS+T+Q+ Sbjct: 602 VSPSVTVQL 610>XP_005257936 Length = 1665 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 VSPSITLQV 9 VSPS+T+Q+ Sbjct: 602 VSPSVTVQL 610>XP_005257935 Length = 1676 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 VSPSITLQV 9 VSPS+T+Q+ Sbjct: 602 VSPSVTVQL 610>XP_006722271 Length = 1700 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 VSPSITLQV 9 VSPS+T+Q+ Sbjct: 602 VSPSVTVQL 610>NP_004110 Length = 993 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VSPSITLQV 9 VS SITLQV Sbjct: 85 VSASITLQV 93>XP_006711469 Length = 357 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 VSPSITLQV 9 +SPS+TL+V Sbjct: 14 LSPSLTLKV 22>XP_005245352 Length = 357 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 VSPSITLQV 9 +SPS+TL+V Sbjct: 14 LSPSLTLKV 22>NP_542437 Length = 839 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VSPSITLQ 8 VSP IT+Q Sbjct: 78 VSPVITIQ 85>NP_061197 Length = 839 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VSPSITLQ 8 VSP IT+Q Sbjct: 78 VSPVITIQ 85>NP_542435 Length = 839 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VSPSITLQ 8 VSP IT+Q Sbjct: 78 VSPVITIQ 85>NP_542436 Length = 839 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VSPSITLQ 8 VSP IT+Q Sbjct: 78 VSPVITIQ 85>NP_003740 Length = 1338 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 PSITLQV 9 PS+TLQ+ Sbjct: 236 PSVTLQL 242>NP_001276953 Length = 702 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SPSITLQV 9 SP +TLQ+ Sbjct: 166 SPEVTLQL 173>NP_714912 Length = 381 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SPSITLQV 9 SP +TLQ+ Sbjct: 126 SPEVTLQL 133>NP_001276952 Length = 660 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SPSITLQV 9 SP +TLQ+ Sbjct: 126 SPEVTLQL 133>NP_005526 Length = 662 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SPSITLQV 9 SP +TLQ+ Sbjct: 126 SPEVTLQL 133>XP_006722804 Length = 674 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SPSITLQV 9 SP +TLQ+ Sbjct: 126 SPEVTLQL 133>NP_078966 Length = 14507 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SPSITL 7 SPSITL Sbjct: 2308 SPSITL 2313>NP_004127 Length = 963 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VSPSITLQV 9 +SP ITL + Sbjct: 918 LSPGITLNI 926>NP_001186028 Length = 1124 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VSPSITLQV 9 +SP +TL+V Sbjct: 587 LSPKMTLEV 595>NP_001186026 Length = 1152 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VSPSITLQV 9 +SP +TL+V Sbjct: 615 LSPKMTLEV 623>NP_001186027 Length = 1129 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VSPSITLQV 9 +SP +TL+V Sbjct: 592 LSPKMTLEV 600>NP_001186025 Length = 1116 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VSPSITLQV 9 +SP +TL+V Sbjct: 579 LSPKMTLEV 587>NP_001273720 Length = 672 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VSPSITLQV 9 ++P+ITL V Sbjct: 500 IAPAITLTV 508>NP_006107 Length = 504 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 SPSITLQ 8 SP++TLQ Sbjct: 438 SPTLTLQ 444>NP_001483 Length = 372 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 SPSITLQ 8 SP +TLQ Sbjct: 82 SPGVTLQ 88>NP_060501 Length = 1151 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 SPSITLQ 8 +PS+TLQ Sbjct: 1001 TPSLTLQ 1007>NP_003924 Length = 1187 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VSPSITLQV 9 +SP +TL+V Sbjct: 650 LSPKMTLEV 658>NP_056453 Length = 797 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SPSITLQV 9 SP ITL++ Sbjct: 449 SPDITLKI 456>NP_079363 Length = 699 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VSPSITLQV 9 ++P+ITL V Sbjct: 527 IAPAITLTV 535>NP_003176 Length = 1085 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 VSPSITLQ 8 V PS TLQ Sbjct: 534 VQPSATLQ 541>NP_955400 Length = 789 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SPSITLQV 9 SP ITL++ Sbjct: 441 SPDITLKI 448>NP_001273393 Length = 1169 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VSPSITLQV 9 +SP +TL+V Sbjct: 632 LSPKMTLEV 640>XP_005259010 Length = 1261 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VSPSITLQV 9 +SPS+TL + Sbjct: 1083 LSPSLTLSL 1091>XP_006714093 Length = 511 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VSPSITLQV 9 ++P+ITL V Sbjct: 339 IAPAITLTV 347>XP_005248183 Length = 613 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VSPSITLQV 9 ++P+ITL V Sbjct: 441 IAPAITLTV 449>XP_005264894 Length = 1070 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 SPSITLQ 8 +PS+TLQ Sbjct: 920 TPSLTLQ 926>NP_065172 Length = 476 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 VSPSITLQV 9 + PS++LQ+ Sbjct: 287 IYPSVSLQI 295Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.312 0.125 0.310 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 785,884 Number of extensions: 1170 Number of successful extensions: 57 Number of sequences better than 10000.0: 57 Number of HSP's gapped: 57 Number of HSP's successfully gapped: 57 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |