Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001185761 19 665 NP_001185763 19 665 NP_055459 19 665 XP_006726410 19 665 XP_006711719 19 665 XP_006711718 19 665 XP_006711717 19 665 XP_006711716 19 665 XP_006711715 19 665 XP_006711714 19 665 XP_006711713 19 665 XP_006711712 19 665 XP_006711711 19 665 XP_006711710 19 665 XP_006711709 19 665 XP_005277503 19 665 XP_005273038 19 665 XP_006711708 19 665 XP_005277500 19 665 XP_006711707 19 665 XP_005277499 19 665 XP_006711706 19 665 XP_006711705 19 665 XP_006711164 19 665 XP_005276153 19 665 XP_003846805 19 665 NP_000833 17 3301 NP_001137303 17 3301 NP_060158 17 3301 XP_006718893 17 3301 XP_006718892 17 3301 XP_006718891 17 3301 XP_005252120 17 3301 XP_006717212 17 3301 NP_001264994 17 4312 NP_001264995 17 4312 NP_001264996 17 4312 NP_001264993 17 4312 NP_063941 17 4312 XP_006715531 17 4312 XP_006715530 17 4312 NP_997716 16 5631 NP_001124319 16 5631 NP_004199 16 5631 NP_665812 16 5631 NP_665811 16 5631 NP_001165694 16 7355 NP_443731 16 7355 NP_001034842 16 7355 XP_006712080 16 7355 XP_006712079 16 7355 NP_006199 15 9605 NP_001012267 15 9605 NP_001273898 15 9605 NP_001269122 15 9605 NP_001269121 15 9605 NP_057218 15 9605 NP_919412 15 9605 NP_001273900 15 9605 NP_002928 15 9605 XP_006716561 15 9605 XP_005250812 15 9605 XP_005272028 15 9605 XP_005272027 15 9605 XP_005272026 15 9605 XP_005272025 15 9605 XP_005272024 15 9605 NP_001017372 15 9605 NP_054750 15 9605>NP_001185761 Length = 2240 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VSLVRSVCS 9 VSLVRS CS Sbjct: 2099 VSLVRSACS 2107>NP_001185763 Length = 2362 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VSLVRSVCS 9 VSLVRS CS Sbjct: 2205 VSLVRSACS 2213>NP_055459 Length = 2346 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VSLVRSVCS 9 VSLVRS CS Sbjct: 2205 VSLVRSACS 2213>XP_006726410 Length = 2087 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VSLVRSVCS 9 VSLVRS CS Sbjct: 1946 VSLVRSACS 1954>XP_006711719 Length = 2302 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VSLVRSVCS 9 VSLVRS CS Sbjct: 2161 VSLVRSACS 2169>XP_006711718 Length = 1436 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VSLVRSVCS 9 VSLVRS CS Sbjct: 1212 VSLVRSACS 1220>XP_006711717 Length = 2385 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VSLVRSVCS 9 VSLVRS CS Sbjct: 2161 VSLVRSACS 2169>XP_006711716 Length = 2411 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VSLVRSVCS 9 VSLVRS CS Sbjct: 2270 VSLVRSACS 2278>XP_006711715 Length = 2428 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VSLVRSVCS 9 VSLVRS CS Sbjct: 2204 VSLVRSACS 2212>XP_006711714 Length = 2429 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VSLVRSVCS 9 VSLVRS CS Sbjct: 2205 VSLVRSACS 2213>XP_006711713 Length = 2432 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VSLVRSVCS 9 VSLVRS CS Sbjct: 2208 VSLVRSACS 2216>XP_006711712 Length = 2473 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VSLVRSVCS 9 VSLVRS CS Sbjct: 2249 VSLVRSACS 2257>XP_006711711 Length = 2482 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VSLVRSVCS 9 VSLVRS CS Sbjct: 2258 VSLVRSACS 2266>XP_006711710 Length = 2494 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VSLVRSVCS 9 VSLVRS CS Sbjct: 2270 VSLVRSACS 2278>XP_006711709 Length = 2495 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VSLVRSVCS 9 VSLVRS CS Sbjct: 2271 VSLVRSACS 2279>XP_005277503 Length = 2498 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VSLVRSVCS 9 VSLVRS CS Sbjct: 2368 VSLVRSACS 2376>XP_005273038 Length = 2509 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VSLVRSVCS 9 VSLVRS CS Sbjct: 2368 VSLVRSACS 2376>XP_006711708 Length = 2512 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VSLVRSVCS 9 VSLVRS CS Sbjct: 2288 VSLVRSACS 2296>XP_005277500 Length = 2525 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VSLVRSVCS 9 VSLVRS CS Sbjct: 2368 VSLVRSACS 2376>XP_006711707 Length = 2553 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VSLVRSVCS 9 VSLVRS CS Sbjct: 2329 VSLVRSACS 2337>XP_005277499 Length = 2561 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VSLVRSVCS 9 VSLVRS CS Sbjct: 2368 VSLVRSACS 2376>XP_006711706 Length = 2591 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VSLVRSVCS 9 VSLVRS CS Sbjct: 2367 VSLVRSACS 2375>XP_006711705 Length = 2592 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VSLVRSVCS 9 VSLVRS CS Sbjct: 2368 VSLVRSACS 2376>XP_006711164 Length = 2087 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VSLVRSVCS 9 VSLVRS CS Sbjct: 1946 VSLVRSACS 1954>XP_005276153 Length = 267 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VSLVRSVCS 9 VSLVRS CS Sbjct: 162 VSLVRSACS 170>XP_003846805 Length = 306 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VSLVRSVCS 9 VSLVRS CS Sbjct: 201 VSLVRSACS 209>NP_000833 Length = 1180 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SLVRSVCS 9 +++RSVCS Sbjct: 505 NIIRSVCS 512>NP_001137303 Length = 1212 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SLVRSVCS 9 +++RSVCS Sbjct: 505 NIIRSVCS 512>NP_060158 Length = 402 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 VSLVRSVC 8 +SLVRS+C Sbjct: 114 LSLVRSLC 121>XP_006718893 Length = 1180 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SLVRSVCS 9 +++RSVCS Sbjct: 505 NIIRSVCS 512>XP_006718892 Length = 1212 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SLVRSVCS 9 +++RSVCS Sbjct: 505 NIIRSVCS 512>XP_006718891 Length = 1212 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SLVRSVCS 9 +++RSVCS Sbjct: 505 NIIRSVCS 512>XP_005252120 Length = 193 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 VSLVRSVC 8 +SLVRS+C Sbjct: 114 LSLVRSLC 121>XP_006717212 Length = 401 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 VSLVRSVC 8 +SLVRS+C Sbjct: 114 LSLVRSLC 121>NP_001264994 Length = 906 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LVRSVCS 9 +VRSVCS Sbjct: 519 VVRSVCS 525>NP_001264995 Length = 906 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LVRSVCS 9 +VRSVCS Sbjct: 519 VVRSVCS 525>NP_001264996 Length = 908 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LVRSVCS 9 +VRSVCS Sbjct: 519 VVRSVCS 525>NP_001264993 Length = 1194 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LVRSVCS 9 +VRSVCS Sbjct: 519 VVRSVCS 525>NP_063941 Length = 323 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VSLVRSVCS 9 +SLV S+C+ Sbjct: 126 ISLVASICN 134>XP_006715531 Length = 1029 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LVRSVCS 9 +VRSVCS Sbjct: 519 VVRSVCS 525>XP_006715530 Length = 906 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LVRSVCS 9 +VRSVCS Sbjct: 519 VVRSVCS 525>NP_997716 Length = 227 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SLVRSVCS 9 SLV+S CS Sbjct: 26 SLVQSACS 33>NP_001124319 Length = 324 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VSLVRSVC 8 V LVR+VC Sbjct: 17 VPLVRTVC 24>NP_004199 Length = 613 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VSLVRSVC 8 V LVR+VC Sbjct: 17 VPLVRTVC 24>NP_665812 Length = 326 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VSLVRSVC 8 V LVR+VC Sbjct: 17 VPLVRTVC 24>NP_665811 Length = 609 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VSLVRSVC 8 V LVR+VC Sbjct: 17 VPLVRTVC 24>NP_001165694 Length = 268 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 SLVRSVC 8 SLVR +C Sbjct: 173 SLVRKIC 179>NP_443731 Length = 237 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 SLVRSVC 8 SLVR +C Sbjct: 142 SLVRKIC 148>NP_001034842 Length = 1958 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 VSLVRSVC 8 V VRSVC Sbjct: 1646 VECVRSVC 1653>XP_006712080 Length = 924 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 VSLVRSVC 8 V VRSVC Sbjct: 612 VECVRSVC 619>XP_006712079 Length = 1683 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 VSLVRSVC 8 V VRSVC Sbjct: 1371 VECVRSVC 1378>NP_006199 Length = 925 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VSLVRSVC 8 +SLV SVC Sbjct: 78 LSLVLSVC 85>NP_001012267 Length = 288 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 SLVRSVCS 9 SL++S+C+ Sbjct: 277 SLIKSLCA 284>NP_001273898 Length = 176 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 SLVRSVCS 9 SL++S+C+ Sbjct: 165 SLIKSLCA 172>NP_001269122 Length = 147 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 VRSVCS 9 +RS+CS Sbjct: 81 IRSICS 86>NP_001269121 Length = 147 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 VRSVCS 9 +RS+CS Sbjct: 81 IRSICS 86>NP_057218 Length = 472 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SLVRSVCS 9 SL+RSV S Sbjct: 202 SLIRSVAS 209>NP_919412 Length = 147 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 VRSVCS 9 +RS+CS Sbjct: 81 IRSICS 86>NP_001273900 Length = 115 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 SLVRSVCS 9 SL++S+C+ Sbjct: 104 SLIKSLCA 111>NP_002928 Length = 147 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 VRSVCS 9 +RS+CS Sbjct: 81 IRSICS 86>XP_006716561 Length = 304 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SLVRSVCS 9 SL+RSV S Sbjct: 202 SLIRSVAS 209>XP_005250812 Length = 472 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SLVRSVCS 9 SL+RSV S Sbjct: 202 SLIRSVAS 209>XP_005272028 Length = 619 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VSLVRSVC 8 VSL++S C Sbjct: 212 VSLLKSTC 219>XP_005272027 Length = 619 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VSLVRSVC 8 VSL++S C Sbjct: 212 VSLLKSTC 219>XP_005272026 Length = 619 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VSLVRSVC 8 VSL++S C Sbjct: 212 VSLLKSTC 219>XP_005272025 Length = 619 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VSLVRSVC 8 VSL++S C Sbjct: 212 VSLLKSTC 219>XP_005272024 Length = 619 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VSLVRSVC 8 VSL++S C Sbjct: 212 VSLLKSTC 219>NP_001017372 Length = 619 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VSLVRSVC 8 VSL++S C Sbjct: 212 VSLLKSTC 219>NP_054750 Length = 619 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VSLVRSVC 8 VSL++S C Sbjct: 212 VSLLKSTC 219Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.328 0.127 0.351 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 465,627 Number of extensions: 567 Number of successful extensions: 69 Number of sequences better than 10000.0: 69 Number of HSP's gapped: 69 Number of HSP's successfully gapped: 69 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.2 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |