Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001073922 18 1935 NP_000258 17 2528 NP_001035957 17 2528 XP_006721991 17 2528 XP_006721990 17 2528 XP_006721989 17 2528 XP_005258041 17 2528 XP_006721988 17 2528 XP_006721987 17 2528 XP_006721986 17 2528 XP_005258040 17 2528 XP_006721985 17 2528 NP_057305 17 3301 XP_005268514 17 3301 NP_001129115 17 3301 NP_001129116 17 3301 NP_001073942 17 4312 XP_005264358 17 4312 NP_079430 16 5631 NP_001124437 16 5631 NP_001269645 16 7355 NP_036579 16 7355 NP_001269646 16 7355 NP_001269647 16 7355 NP_001036216 16 7355 NP_005853 16 7355 NP_001036214 16 7355 NP_006594 16 7355 NP_001036215 16 7355 NP_001269347 16 7355 NP_852111 16 7355 NP_000136 16 7355 NP_001094344 16 7355 NP_631912 16 7355 XP_006724972 16 7355 XP_006724791 16 7355 XP_005262418 16 7355 XP_005262417 16 7355 XP_005262416 16 7355 XP_005262415 16 7355 XP_006724790 16 7355 XP_005262414 16 7355 XP_005250173 16 7355 XP_006714156 16 7355 XP_006714155 16 7355 XP_006713534 16 7355 NP_001193941 15 9605 NP_002623 15 9605 NP_003310 15 9605 NP_597676 15 9605 NP_001243779 15 9605 NP_596869 15 9605 NP_003974 15 9605 NP_001070253 15 9605 NP_699172 15 9605 NP_001120833 15 9605 NP_008931 15 9605 NP_001268372 15 9605 XP_005267818 15 9605 XP_005246888 15 9605 XP_006712788 15 9605 XP_006712787 15 9605 XP_006712786 15 9605 XP_006710421 15 9605 XP_006710420 15 9605 XP_005270517 15 9605 XP_006710419 15 9605 NP_001254479 15 9605 NP_597681 15 9605>NP_001073922 Length = 2190 Score = 17.7 bits (34), Expect = 1935 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 SLLAGLSL 9 SLLAGLSL Sbjct: 2000 SLLAGLSL 2007>NP_000258 Length = 2818 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VSLLAGLSL 9 VSLLAGL L Sbjct: 1077 VSLLAGLPL 1085>NP_001035957 Length = 2839 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VSLLAGLSL 9 VSLLAGL L Sbjct: 1077 VSLLAGLPL 1085>XP_006721991 Length = 1632 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VSLLAGLSL 9 VSLLAGL L Sbjct: 1087 VSLLAGLPL 1095>XP_006721990 Length = 2823 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VSLLAGLSL 9 VSLLAGL L Sbjct: 1087 VSLLAGLPL 1095>XP_006721989 Length = 2823 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VSLLAGLSL 9 VSLLAGL L Sbjct: 1087 VSLLAGLPL 1095>XP_005258041 Length = 2836 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VSLLAGLSL 9 VSLLAGL L Sbjct: 1077 VSLLAGLPL 1085>XP_006721988 Length = 2846 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VSLLAGLSL 9 VSLLAGL L Sbjct: 1087 VSLLAGLPL 1095>XP_006721987 Length = 2849 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VSLLAGLSL 9 VSLLAGL L Sbjct: 1087 VSLLAGLPL 1095>XP_006721986 Length = 2854 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VSLLAGLSL 9 VSLLAGL L Sbjct: 1074 VSLLAGLPL 1082>XP_005258040 Length = 2857 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VSLLAGLSL 9 VSLLAGL L Sbjct: 1077 VSLLAGLPL 1085>XP_006721985 Length = 2867 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VSLLAGLSL 9 VSLLAGL L Sbjct: 1087 VSLLAGLPL 1095>NP_057305 Length = 460 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 VSLLAGLSL 9 +S LAGLSL Sbjct: 197 ISTLAGLSL 205>XP_005268514 Length = 317 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 VSLLAGLSL 9 +S LAGLSL Sbjct: 54 ISTLAGLSL 62>NP_001129115 Length = 467 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 VSLLAGLSL 9 +S LAGLSL Sbjct: 204 ISTLAGLSL 212>NP_001129116 Length = 403 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 VSLLAGLSL 9 +S LAGLSL Sbjct: 140 ISTLAGLSL 148>NP_001073942 Length = 497 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 VSLLAGLSL 9 +S LAGLSL Sbjct: 268 LSFLAGLSL 276>XP_005264358 Length = 504 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 VSLLAGLSL 9 +S LAGLSL Sbjct: 268 LSFLAGLSL 276>NP_079430 Length = 702 Score = 16.2 bits (30), Expect = 5631 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 LLAGLSL 9 LLAGLSL Sbjct: 219 LLAGLSL 225>NP_001124437 Length = 785 Score = 16.2 bits (30), Expect = 5631 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 LLAGLSL 9 LLAGLSL Sbjct: 302 LLAGLSL 308>NP_001269645 Length = 1225 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VSLLAGLS 8 +SLL GLS Sbjct: 217 ISLLTGLS 224>NP_036579 Length = 1225 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VSLLAGLS 8 +SLL GLS Sbjct: 217 ISLLTGLS 224>NP_001269646 Length = 1226 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VSLLAGLS 8 +SLL GLS Sbjct: 217 ISLLTGLS 224>NP_001269647 Length = 1167 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VSLLAGLS 8 +SLL GLS Sbjct: 159 ISLLTGLS 166>NP_001036216 Length = 1231 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VSLLAGLS 8 +SLL GLS Sbjct: 201 ISLLTGLS 208>NP_005853 Length = 1258 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VSLLAGLS 8 +SLL GLS Sbjct: 204 ISLLTGLS 211>NP_001036214 Length = 1268 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VSLLAGLS 8 +SLL GLS Sbjct: 201 ISLLTGLS 208>NP_006594 Length = 1231 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VSLLAGLS 8 +SLL GLS Sbjct: 201 ISLLTGLS 208>NP_001036215 Length = 1268 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VSLLAGLS 8 +SLL GLS Sbjct: 201 ISLLTGLS 208>NP_001269347 Length = 1231 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VSLLAGLS 8 +SLL GLS Sbjct: 201 ISLLTGLS 208>NP_852111 Length = 669 Score = 15.8 bits (29), Expect = 7355 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VSLLAGLSL 9 VSLLA LSL Sbjct: 6 VSLLAFLSL 14>NP_000136 Length = 695 Score = 15.8 bits (29), Expect = 7355 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VSLLAGLSL 9 VSLLA LSL Sbjct: 6 VSLLAFLSL 14>NP_001094344 Length = 475 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VSLLAGLSL 9 +SLLAG+ L Sbjct: 292 ISLLAGIVL 300>NP_631912 Length = 515 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VSLLAGLSL 9 +SLLAG+ L Sbjct: 292 ISLLAGIVL 300>XP_006724972 Length = 265 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VSLLAGLSL 9 +SLLAG+ L Sbjct: 224 ISLLAGIVL 232>XP_006724791 Length = 1199 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VSLLAGLS 8 +SLL GLS Sbjct: 132 ISLLTGLS 139>XP_005262418 Length = 1231 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VSLLAGLS 8 +SLL GLS Sbjct: 201 ISLLTGLS 208>XP_005262417 Length = 1268 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VSLLAGLS 8 +SLL GLS Sbjct: 201 ISLLTGLS 208>XP_005262416 Length = 1268 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VSLLAGLS 8 +SLL GLS Sbjct: 201 ISLLTGLS 208>XP_005262415 Length = 1268 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VSLLAGLS 8 +SLL GLS Sbjct: 201 ISLLTGLS 208>XP_006724790 Length = 1268 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VSLLAGLS 8 +SLL GLS Sbjct: 201 ISLLTGLS 208>XP_005262414 Length = 1268 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VSLLAGLS 8 +SLL GLS Sbjct: 201 ISLLTGLS 208>XP_005250173 Length = 1222 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VSLLAGLS 8 +SLL GLS Sbjct: 217 ISLLTGLS 224>XP_006714156 Length = 515 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VSLLAGLSL 9 +SLLAG+ L Sbjct: 292 ISLLAGIVL 300>XP_006714155 Length = 624 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VSLLAGLSL 9 +SLLAG+ L Sbjct: 401 ISLLAGIVL 409>XP_006713534 Length = 1222 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VSLLAGLS 8 +SLL GLS Sbjct: 204 ISLLTGLS 211>NP_001193941 Length = 149 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VSLLAGLSL 9 + LLAGL+L Sbjct: 11 LQLLAGLAL 19>NP_002623 Length = 170 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VSLLAGLSL 9 + LLAGL+L Sbjct: 11 LQLLAGLAL 19>NP_003310 Length = 26926 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VSLLAGLSL 9 V LLAGL++ Sbjct: 7197 VKLLAGLTV 7205>NP_597676 Length = 27051 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VSLLAGLSL 9 V LLAGL++ Sbjct: 7322 VKLLAGLTV 7330>NP_001243779 Length = 34350 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VSLLAGLSL 9 V LLAGL++ Sbjct: 14621 VKLLAGLTV 14629>NP_596869 Length = 33423 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VSLLAGLSL 9 V LLAGL++ Sbjct: 13694 VKLLAGLTV 13702>NP_003974 Length = 515 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VSLLAGLSL 9 +SLL G+SL Sbjct: 45 ISLLNGVSL 53>NP_001070253 Length = 515 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VSLLAGLSL 9 +SLL G+SL Sbjct: 45 ISLLNGVSL 53>NP_699172 Length = 732 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 VSLLAGLSL 9 +SL+AG+++ Sbjct: 361 ISLIAGIAI 369>NP_001120833 Length = 587 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 VSLLAGLSL 9 +SL+AG+++ Sbjct: 360 ISLIAGIAI 368>NP_008931 Length = 258 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VSLLAGLSL 9 + LL+GLSL Sbjct: 26 IILLSGLSL 34>NP_001268372 Length = 273 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VSLLAGLSL 9 + LL+GLSL Sbjct: 26 IILLSGLSL 34>XP_005267818 Length = 169 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VSLLAGLSL 9 + LLAGL+L Sbjct: 11 LQLLAGLAL 19>XP_005246888 Length = 22663 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VSLLAGLSL 9 V LLAGL++ Sbjct: 2934 VKLLAGLTV 2942>XP_006712788 Length = 24022 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VSLLAGLSL 9 V LLAGL++ Sbjct: 4293 VKLLAGLTV 4301>XP_006712787 Length = 33978 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VSLLAGLSL 9 V LLAGL++ Sbjct: 14249 VKLLAGLTV 14257>XP_006712786 Length = 35484 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VSLLAGLSL 9 V LLAGL++ Sbjct: 15755 VKLLAGLTV 15763>XP_006710421 Length = 588 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 VSLLAGLSL 9 +SL+AG+++ Sbjct: 361 ISLIAGIAI 369>XP_006710420 Length = 688 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 VSLLAGLSL 9 +SL+AG+++ Sbjct: 361 ISLIAGIAI 369>XP_005270517 Length = 731 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 VSLLAGLSL 9 +SL+AG+++ Sbjct: 360 ISLIAGIAI 368>XP_006710419 Length = 732 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 VSLLAGLSL 9 +SL+AG+++ Sbjct: 361 ISLIAGIAI 369>NP_001254479 Length = 35991 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VSLLAGLSL 9 V LLAGL++ Sbjct: 16262 VKLLAGLTV 16270>NP_597681 Length = 27118 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VSLLAGLSL 9 V LLAGL++ Sbjct: 7389 VKLLAGLTV 7397Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.321 0.139 0.331 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 366,514 Number of extensions: 582 Number of successful extensions: 69 Number of sequences better than 10000.0: 69 Number of HSP's gapped: 69 Number of HSP's successfully gapped: 69 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |