Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000042 18 1482 XP_006718908 18 1482 XP_005271621 18 1482 XP_006718907 18 1482 XP_006718906 18 1482 XP_005271619 18 1482 XP_005271618 18 1482 NP_710159 17 2528 XP_005273485 17 2528 NP_919424 17 3301 NP_002287 17 3301 XP_005273182 17 3301 NP_001182192 17 4312 NP_079171 17 4312 XP_006718038 17 4312 XP_005270222 17 4312 NP_006197 16 5631 NP_001231118 16 5631 NP_001231121 16 5631 NP_055564 16 5631 NP_001231119 16 5631 NP_001231120 16 5631 NP_001231122 16 5631 NP_058132 16 5631 NP_001027581 16 5631 XP_006720406 16 5631 XP_006720405 16 5631 XP_006720404 16 5631 XP_006720403 16 5631 XP_006720402 16 5631 XP_006720401 16 5631 XP_006720400 16 5631 XP_006720399 16 5631 XP_006719497 16 5631 XP_006714104 16 5631 XP_005265800 16 5631 XP_006714103 16 5631 XP_006714102 16 5631 NP_002525 16 5631 NP_057336 16 7355 NP_001073932 16 7355 NP_001368 16 7355 XP_006718966 16 7355 XP_006712120 16 7355 XP_005264512 16 7355 XP_005264511 16 7355 XP_006712119 16 7355 XP_005264510 16 7355 XP_006712118 16 7355 XP_005264509 16 7355 XP_005264508 16 7355 XP_006712117 16 7355 XP_005264507 16 7355 XP_005264506 16 7355 NP_060066 15 9605 NP_001239029 15 9605 NP_001239032 15 9605 NP_001239031 15 9605>NP_000042 Length = 3056 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VSKVVEGTS 9 VSK VEGTS Sbjct: 2115 VSKEVEGTS 2123>XP_006718908 Length = 1708 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VSKVVEGTS 9 VSK VEGTS Sbjct: 767 VSKEVEGTS 775>XP_005271621 Length = 2708 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VSKVVEGTS 9 VSK VEGTS Sbjct: 1767 VSKEVEGTS 1775>XP_006718907 Length = 3050 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VSKVVEGTS 9 VSK VEGTS Sbjct: 2109 VSKEVEGTS 2117>XP_006718906 Length = 3056 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VSKVVEGTS 9 VSK VEGTS Sbjct: 2115 VSKEVEGTS 2123>XP_005271619 Length = 3056 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VSKVVEGTS 9 VSK VEGTS Sbjct: 2115 VSKEVEGTS 2123>XP_005271618 Length = 3056 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VSKVVEGTS 9 VSK VEGTS Sbjct: 2115 VSKEVEGTS 2123>NP_710159 Length = 476 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 VSKVVEGTS 9 V KVVEGT+ Sbjct: 412 VCKVVEGTA 420>XP_005273485 Length = 464 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 VSKVVEGTS 9 V KVVEGT+ Sbjct: 400 VCKVVEGTA 408>NP_919424 Length = 615 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VSKVVEGT 8 + KVVEGT Sbjct: 277 IGKVVEGT 284>NP_002287 Length = 615 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VSKVVEGT 8 + KVVEGT Sbjct: 277 IGKVVEGT 284>XP_005273182 Length = 573 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VSKVVEGT 8 + KVVEGT Sbjct: 277 IGKVVEGT 284>NP_001182192 Length = 1033 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 VSKVVEGTS 9 VSKV EG+S Sbjct: 113 VSKVEEGSS 121>NP_079171 Length = 517 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 VSKVVEGTS 9 VSKV EG+S Sbjct: 113 VSKVEEGSS 121>XP_006718038 Length = 537 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 VSKVVEGTS 9 VSKV EG+S Sbjct: 113 VSKVEEGSS 121>XP_005270222 Length = 561 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 VSKVVEGTS 9 VSKV EG+S Sbjct: 113 VSKVEEGSS 121>NP_006197 Length = 1089 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 KVVEGTS 9 KVVEGT+ Sbjct: 606 KVVEGTA 612>NP_001231118 Length = 1644 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SKVVEGTS 9 S +VEGTS Sbjct: 1032 SDIVEGTS 1039>NP_001231121 Length = 1504 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SKVVEGTS 9 S +VEGTS Sbjct: 935 SDIVEGTS 942>NP_055564 Length = 1472 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SKVVEGTS 9 S +VEGTS Sbjct: 903 SDIVEGTS 910>NP_001231119 Length = 1533 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SKVVEGTS 9 S +VEGTS Sbjct: 964 SDIVEGTS 971>NP_001231120 Length = 1463 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SKVVEGTS 9 S +VEGTS Sbjct: 894 SDIVEGTS 901>NP_001231122 Length = 1347 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SKVVEGTS 9 S +VEGTS Sbjct: 839 SDIVEGTS 846>NP_058132 Length = 400 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 VSKVVEGTS 9 VSKVV+G S Sbjct: 55 VSKVVKGGS 63>NP_001027581 Length = 414 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 VSKVVEGTS 9 VSKVV+G S Sbjct: 55 VSKVVKGGS 63>XP_006720406 Length = 1591 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SKVVEGTS 9 S +VEGTS Sbjct: 979 SDIVEGTS 986>XP_006720405 Length = 1347 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SKVVEGTS 9 S +VEGTS Sbjct: 979 SDIVEGTS 986>XP_006720404 Length = 1477 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SKVVEGTS 9 S +VEGTS Sbjct: 979 SDIVEGTS 986>XP_006720403 Length = 1486 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SKVVEGTS 9 S +VEGTS Sbjct: 979 SDIVEGTS 986>XP_006720402 Length = 1487 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SKVVEGTS 9 S +VEGTS Sbjct: 979 SDIVEGTS 986>XP_006720401 Length = 1504 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SKVVEGTS 9 S +VEGTS Sbjct: 979 SDIVEGTS 986>XP_006720400 Length = 1526 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SKVVEGTS 9 S +VEGTS Sbjct: 979 SDIVEGTS 986>XP_006720399 Length = 1548 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SKVVEGTS 9 S +VEGTS Sbjct: 979 SDIVEGTS 986>XP_006719497 Length = 384 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 VSKVVEGTS 9 VSKVV+G S Sbjct: 55 VSKVVKGGS 63>XP_006714104 Length = 832 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 KVVEGTS 9 KVVEGT+ Sbjct: 631 KVVEGTA 637>XP_005265800 Length = 1089 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 KVVEGTS 9 KVVEGT+ Sbjct: 606 KVVEGTA 612>XP_006714103 Length = 1111 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 KVVEGTS 9 KVVEGT+ Sbjct: 628 KVVEGTA 634>XP_006714102 Length = 1114 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 KVVEGTS 9 KVVEGT+ Sbjct: 631 KVVEGTA 637>NP_002525 Length = 364 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 VSKVVEGTS 9 VSKVV+G S Sbjct: 55 VSKVVKGGS 63>NP_057336 Length = 4857 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KVVEGTS 9 KV++GTS Sbjct: 92 KVIDGTS 98>NP_001073932 Length = 4314 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VSKVVEGTS 9 +SKV+ GT+ Sbjct: 4104 LSKVIRGTT 4112>NP_001368 Length = 4307 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VSKVVEGTS 9 +SKV+ GT+ Sbjct: 4097 LSKVIRGTT 4105>XP_006718966 Length = 4300 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VSKVVEGTS 9 +SKV+ GT+ Sbjct: 4090 LSKVIRGTT 4098>XP_006712120 Length = 4812 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KVVEGTS 9 KV++GTS Sbjct: 92 KVIDGTS 98>XP_005264512 Length = 4840 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KVVEGTS 9 KV++GTS Sbjct: 92 KVIDGTS 98>XP_005264511 Length = 4847 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KVVEGTS 9 KV++GTS Sbjct: 92 KVIDGTS 98>XP_006712119 Length = 4851 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KVVEGTS 9 KV++GTS Sbjct: 92 KVIDGTS 98>XP_005264510 Length = 4861 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KVVEGTS 9 KV++GTS Sbjct: 92 KVIDGTS 98>XP_006712118 Length = 4864 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KVVEGTS 9 KV++GTS Sbjct: 92 KVIDGTS 98>XP_005264509 Length = 4870 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KVVEGTS 9 KV++GTS Sbjct: 92 KVIDGTS 98>XP_005264508 Length = 4875 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KVVEGTS 9 KV++GTS Sbjct: 92 KVIDGTS 98>XP_006712117 Length = 4878 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KVVEGTS 9 KV++GTS Sbjct: 92 KVIDGTS 98>XP_005264507 Length = 4880 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KVVEGTS 9 KV++GTS Sbjct: 92 KVIDGTS 98>XP_005264506 Length = 4884 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KVVEGTS 9 KV++GTS Sbjct: 92 KVIDGTS 98>NP_060066 Length = 1624 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VSKVVEG 7 VSK++EG Sbjct: 68 VSKLIEG 74>NP_001239029 Length = 1637 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VSKVVEG 7 VSK++EG Sbjct: 68 VSKLIEG 74>NP_001239032 Length = 1610 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VSKVVEG 7 VSK++EG Sbjct: 68 VSKLIEG 74>NP_001239031 Length = 1623 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VSKVVEG 7 VSK++EG Sbjct: 68 VSKLIEG 74Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.293 0.113 0.259 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 442,341 Number of extensions: 425 Number of successful extensions: 58 Number of sequences better than 10000.0: 58 Number of HSP's gapped: 58 Number of HSP's successfully gapped: 58 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.0 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |