Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_065681 20 390 NP_066124 20 390 XP_006717999 20 390 NP_004527 17 4312 NP_075043 17 4312 XP_006725521 17 4312 XP_006725520 17 4312 XP_006725519 17 4312 XP_006725518 17 4312 XP_006725517 17 4312 XP_006725516 17 4312 XP_005276858 17 4312 XP_005276857 17 4312 XP_006726285 17 4312 XP_006726284 17 4312 XP_006726283 17 4312 XP_006726282 17 4312 XP_006714693 17 4312 XP_005248580 17 4312 XP_006714692 17 4312 XP_006714691 17 4312 XP_006714690 17 4312 XP_006714689 17 4312 NP_003346 16 7355 NP_001139681 16 7355 NP_001230713 16 7355 NP_001137311 16 7355 NP_002590 16 7355 XP_005274097 16 7355 NP_001278017 15 9605 NP_114157 15 9605 NP_997191 15 9605 NP_001013725 15 9605 NP_001258558 15 9605 NP_005911 15 9605 NP_001152956 15 9605 NP_056083 15 9605 NP_057582 15 9605 XP_006723474 15 9605 XP_005259362 15 9605 XP_005254450 15 9605 XP_005254449 15 9605 XP_005247302 15 9605 XP_006711682 15 9605 XP_006711396 15 9605 XP_005245226 15 9605 XP_005245227 15 9605 XP_006711394 15 9605 XP_006711393 15 9605>NP_065681 Length = 1072 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 VRRYTSTVL 9 VRRYTST+L Sbjct: 311 VRRYTSTLL 319>NP_066124 Length = 1114 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 VRRYTSTVL 9 VRRYTST+L Sbjct: 311 VRRYTSTLL 319>XP_006717999 Length = 1207 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 VRRYTSTVL 9 VRRYTST+L Sbjct: 404 VRRYTSTLL 412>NP_004527 Length = 1403 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VRRYTSTVL 9 +RRY T+L Sbjct: 589 IRRYLETIL 597>NP_075043 Length = 1241 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VRRYTSTVL 9 +RRY T+L Sbjct: 427 IRRYLETIL 435>XP_006725521 Length = 792 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VRRYTSTVL 9 +RRY T+L Sbjct: 589 IRRYLETIL 597>XP_006725520 Length = 1015 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VRRYTSTVL 9 +RRY T+L Sbjct: 201 IRRYLETIL 209>XP_006725519 Length = 1139 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VRRYTSTVL 9 +RRY T+L Sbjct: 325 IRRYLETIL 333>XP_006725518 Length = 1219 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VRRYTSTVL 9 +RRY T+L Sbjct: 405 IRRYLETIL 413>XP_006725517 Length = 1348 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VRRYTSTVL 9 +RRY T+L Sbjct: 589 IRRYLETIL 597>XP_006725516 Length = 1352 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VRRYTSTVL 9 +RRY T+L Sbjct: 589 IRRYLETIL 597>XP_005276858 Length = 792 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VRRYTSTVL 9 +RRY T+L Sbjct: 589 IRRYLETIL 597>XP_005276857 Length = 1015 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VRRYTSTVL 9 +RRY T+L Sbjct: 201 IRRYLETIL 209>XP_006726285 Length = 1139 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VRRYTSTVL 9 +RRY T+L Sbjct: 325 IRRYLETIL 333>XP_006726284 Length = 1219 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VRRYTSTVL 9 +RRY T+L Sbjct: 405 IRRYLETIL 413>XP_006726283 Length = 1348 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VRRYTSTVL 9 +RRY T+L Sbjct: 589 IRRYLETIL 597>XP_006726282 Length = 1352 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VRRYTSTVL 9 +RRY T+L Sbjct: 589 IRRYLETIL 597>XP_006714693 Length = 792 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VRRYTSTVL 9 +RRY T+L Sbjct: 589 IRRYLETIL 597>XP_005248580 Length = 1015 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VRRYTSTVL 9 +RRY T+L Sbjct: 201 IRRYLETIL 209>XP_006714692 Length = 1139 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VRRYTSTVL 9 +RRY T+L Sbjct: 325 IRRYLETIL 333>XP_006714691 Length = 1219 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VRRYTSTVL 9 +RRY T+L Sbjct: 405 IRRYLETIL 413>XP_006714690 Length = 1348 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VRRYTSTVL 9 +RRY T+L Sbjct: 589 IRRYLETIL 597>XP_006714689 Length = 1352 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VRRYTSTVL 9 +RRY T+L Sbjct: 589 IRRYLETIL 597>NP_003346 Length = 309 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 RRYTSTV 8 RRY STV Sbjct: 154 RRYQSTV 160>NP_001139681 Length = 932 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 YTSTVL 9 YTSTVL Sbjct: 363 YTSTVL 368>NP_001230713 Length = 920 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 YTSTVL 9 YTSTVL Sbjct: 351 YTSTVL 356>NP_001137311 Length = 934 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 YTSTVL 9 YTSTVL Sbjct: 365 YTSTVL 370>NP_002590 Length = 941 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 YTSTVL 9 YTSTVL Sbjct: 372 YTSTVL 377>XP_005274097 Length = 940 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 YTSTVL 9 YTSTVL Sbjct: 371 YTSTVL 376>NP_001278017 Length = 2912 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VRRYTST 7 V+R+TST Sbjct: 232 VKRFTST 238>NP_114157 Length = 2873 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VRRYTST 7 V+R+TST Sbjct: 193 VKRFTST 199>NP_997191 Length = 1888 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 RRYTST 7 R+YTST Sbjct: 1070 RKYTST 1075>NP_001013725 Length = 1649 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VRRYTSTVL 9 +RRYT+ +L Sbjct: 402 LRRYTAQLL 410>NP_001258558 Length = 514 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 RRYTSTV 8 RRY STV Sbjct: 129 RRYGSTV 135>NP_005911 Length = 521 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 RRYTSTV 8 RRY STV Sbjct: 129 RRYGSTV 135>NP_001152956 Length = 1736 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 RRYTST 7 R+YTST Sbjct: 1070 RKYTST 1075>NP_056083 Length = 2243 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VRRYTST 7 VR+Y+ST Sbjct: 303 VRKYSST 309>NP_057582 Length = 166 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VRRYTSTVL 9 VR++T+T L Sbjct: 121 VRKWTTTAL 129>XP_006723474 Length = 2737 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VRRYTST 7 V+R+TST Sbjct: 232 VKRFTST 238>XP_005259362 Length = 2855 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VRRYTST 7 V+R+TST Sbjct: 175 VKRFTST 181>XP_005254450 Length = 1505 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VRRYTSTVL 9 +RRYT+ +L Sbjct: 402 LRRYTAQLL 410>XP_005254449 Length = 1626 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VRRYTSTVL 9 +RRYT+ +L Sbjct: 402 LRRYTAQLL 410>XP_005247302 Length = 2248 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VRRYTST 7 VR+Y+ST Sbjct: 303 VRKYSST 309>XP_006711682 Length = 1739 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 RRYTST 7 R+YTST Sbjct: 921 RKYTST 926>XP_006711396 Length = 514 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 RRYTSTV 8 RRY STV Sbjct: 129 RRYGSTV 135>XP_005245226 Length = 521 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 RRYTSTV 8 RRY STV Sbjct: 129 RRYGSTV 135>XP_005245227 Length = 521 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 RRYTSTV 8 RRY STV Sbjct: 129 RRYGSTV 135>XP_006711394 Length = 521 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 RRYTSTV 8 RRY STV Sbjct: 129 RRYGSTV 135>XP_006711393 Length = 521 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 RRYTSTV 8 RRY STV Sbjct: 129 RRYGSTV 135Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.330 0.133 0.350 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 421,244 Number of extensions: 519 Number of successful extensions: 49 Number of sequences better than 10000.0: 49 Number of HSP's gapped: 49 Number of HSP's successfully gapped: 49 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.2 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |