Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005742 19 665 NP_671714 19 665 XP_006715890 19 665 XP_005250160 19 665 XP_005250159 19 665 NP_004167 16 5631 NP_004590 16 5631 NP_001005291 16 5631 XP_006724373 16 5631 XP_006721633 16 5631 XP_005256829 16 5631 NP_009090 15 9605 NP_001138766 15 9605 NP_001257545 15 9605 NP_060767 15 9605 NP_001138765 15 9605 NP_002754 15 9605 NP_003038 15 9605 NP_783863 15 9605 NP_944489 15 9605 NP_114102 15 9605 XP_005259182 15 9605 XP_006719749 15 9605 XP_005269275 15 9605 XP_005265529 15 9605 XP_006713389 15 9605 XP_005265528 15 9605 XP_005265527 15 9605 XP_005265525 15 9605 XP_005265524 15 9605 XP_005265523 15 9605 XP_005265522 15 9605 XP_005265521 15 9605 XP_005265520 15 9605 XP_005265519 15 9605 XP_005265518 15 9605 XP_005265517 15 9605 XP_005265516 15 9605 XP_005265515 15 9605 XP_005265514 15 9605 XP_005265513 15 9605 XP_005265373 15 9605 XP_006711518 15 9605 XP_005273252 15 9605 XP_005273253 15 9605 XP_005273251 15 9605 NP_062538 15 9605>NP_005742 Length = 3907 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 VRQSINDEI 9 VRQSI+DEI Sbjct: 1561 VRQSIHDEI 1569>NP_671714 Length = 3899 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 VRQSINDEI 9 VRQSI+DEI Sbjct: 1561 VRQSIHDEI 1569>XP_006715890 Length = 3860 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 VRQSINDEI 9 VRQSI+DEI Sbjct: 1561 VRQSIHDEI 1569>XP_005250160 Length = 3939 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 VRQSINDEI 9 VRQSI+DEI Sbjct: 1561 VRQSIHDEI 1569>XP_005250159 Length = 3952 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 VRQSINDEI 9 VRQSI+DEI Sbjct: 1561 VRQSIHDEI 1569>NP_004167 Length = 1147 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RQSINDEI 9 R SIND+I Sbjct: 336 RSSINDKI 343>NP_004590 Length = 1141 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RQSINDEI 9 R SIND+I Sbjct: 343 RSSINDKI 350>NP_001005291 Length = 1177 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RQSINDEI 9 R SIND+I Sbjct: 366 RSSINDKI 373>XP_006724373 Length = 1111 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RQSINDEI 9 R SIND+I Sbjct: 313 RSSINDKI 320>XP_006721633 Length = 1123 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RQSINDEI 9 R SIND+I Sbjct: 312 RSSINDKI 319>XP_005256829 Length = 1145 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RQSINDEI 9 R SIND+I Sbjct: 334 RSSINDKI 341>NP_009090 Length = 811 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RQSINDEI 9 +QSI DE+ Sbjct: 758 KQSITDEL 765>NP_001138766 Length = 612 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 RQSIND 7 RQS+ND Sbjct: 592 RQSLND 597>NP_001257545 Length = 737 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RQSINDEI 9 RQ+IND + Sbjct: 640 RQAINDGV 647>NP_060767 Length = 654 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 RQSIND 7 RQS+ND Sbjct: 634 RQSLND 639>NP_001138765 Length = 636 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 RQSIND 7 RQS+ND Sbjct: 616 RQSLND 621>NP_002754 Length = 737 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RQSINDEI 9 RQ+IND + Sbjct: 640 RQAINDGV 647>NP_003038 Length = 815 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 RQSINDEI 9 ++SIN+EI Sbjct: 515 KRSINEEI 522>NP_783863 Length = 1027 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VRQSINDE 8 VR+ +NDE Sbjct: 125 VREFLNDE 132>NP_944489 Length = 976 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VRQSINDE 8 VR+ +NDE Sbjct: 125 VREFLNDE 132>NP_114102 Length = 275 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 SINDEI 9 SINDE+ Sbjct: 155 SINDEV 160>XP_005259182 Length = 275 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 SINDEI 9 SINDE+ Sbjct: 155 SINDEV 160>XP_006719749 Length = 977 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VRQSINDE 8 VR+ +NDE Sbjct: 125 VREFLNDE 132>XP_005269275 Length = 1028 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VRQSINDE 8 VR+ +NDE Sbjct: 125 VREFLNDE 132>XP_005265529 Length = 768 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RQSINDEI 9 +QSI DE+ Sbjct: 715 KQSITDEL 722>XP_006713389 Length = 770 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RQSINDEI 9 +QSI DE+ Sbjct: 717 KQSITDEL 724>XP_005265528 Length = 790 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RQSINDEI 9 +QSI DE+ Sbjct: 737 KQSITDEL 744>XP_005265527 Length = 792 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RQSINDEI 9 +QSI DE+ Sbjct: 739 KQSITDEL 746>XP_005265525 Length = 806 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RQSINDEI 9 +QSI DE+ Sbjct: 753 KQSITDEL 760>XP_005265524 Length = 809 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RQSINDEI 9 +QSI DE+ Sbjct: 756 KQSITDEL 763>XP_005265523 Length = 811 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RQSINDEI 9 +QSI DE+ Sbjct: 758 KQSITDEL 765>XP_005265522 Length = 813 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RQSINDEI 9 +QSI DE+ Sbjct: 760 KQSITDEL 767>XP_005265521 Length = 821 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RQSINDEI 9 +QSI DE+ Sbjct: 771 KQSITDEL 778>XP_005265520 Length = 824 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RQSINDEI 9 +QSI DE+ Sbjct: 771 KQSITDEL 778>XP_005265519 Length = 826 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RQSINDEI 9 +QSI DE+ Sbjct: 773 KQSITDEL 780>XP_005265518 Length = 828 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RQSINDEI 9 +QSI DE+ Sbjct: 775 KQSITDEL 782>XP_005265517 Length = 830 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RQSINDEI 9 +QSI DE+ Sbjct: 777 KQSITDEL 784>XP_005265516 Length = 830 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RQSINDEI 9 +QSI DE+ Sbjct: 777 KQSITDEL 784>XP_005265515 Length = 844 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RQSINDEI 9 +QSI DE+ Sbjct: 794 KQSITDEL 801>XP_005265514 Length = 845 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RQSINDEI 9 +QSI DE+ Sbjct: 792 KQSITDEL 799>XP_005265513 Length = 847 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RQSINDEI 9 +QSI DE+ Sbjct: 794 KQSITDEL 801>XP_005265373 Length = 599 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 RQSIND 7 RQS+ND Sbjct: 579 RQSLND 584>XP_006711518 Length = 680 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RQSINDEI 9 RQ+IND + Sbjct: 640 RQAINDGV 647>XP_005273252 Length = 738 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RQSINDEI 9 RQ+IND + Sbjct: 640 RQAINDGV 647>XP_005273253 Length = 738 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RQSINDEI 9 RQ+IND + Sbjct: 640 RQAINDGV 647>XP_005273251 Length = 738 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RQSINDEI 9 RQ+IND + Sbjct: 640 RQAINDGV 647>NP_062538 Length = 975 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RQSINDEI 9 RQ+I DE+ Sbjct: 65 RQAIEDEL 72Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.313 0.132 0.323 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 469,538 Number of extensions: 735 Number of successful extensions: 47 Number of sequences better than 10000.0: 47 Number of HSP's gapped: 47 Number of HSP's successfully gapped: 47 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.5 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |