Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_115927 19 665 NP_653223 17 2528 NP_065813 16 7355 NP_001121190 16 7355 NP_001121189 16 7355 NP_001186017 16 7355 NP_001186016 16 7355 NP_001002006 16 7355 NP_001186033 16 7355 NP_001180308 16 7355 NP_001070254 16 7355 NP_060329 16 7355 XP_006723876 16 7355 XP_006723875 16 7355 XP_006723874 16 7355 XP_006723873 16 7355 XP_006723872 16 7355 XP_005260273 16 7355 XP_006723871 16 7355 XP_006723870 16 7355 XP_006723869 16 7355 XP_005269099 16 7355 XP_006718388 16 7355 XP_006718387 16 7355 XP_006718386 16 7355 NP_001229825 15 9605 NP_001229826 15 9605 NP_653319 15 9605 NP_060050 15 9605 NP_055477 15 9605 NP_001129501 15 9605 NP_619520 15 9605 NP_055781 15 9605 NP_006276 15 9605 XP_005261924 15 9605 XP_006724450 15 9605 XP_006724449 15 9605 XP_005261923 15 9605 XP_006724448 15 9605 XP_006724447 15 9605 XP_005261922 15 9605 XP_005261921 15 9605 XP_005261920 15 9605 XP_005261919 15 9605 XP_005269983 15 9605 XP_005269982 15 9605 XP_006717970 15 9605 XP_006714215 15 9605 XP_006714214 15 9605 XP_005262915 15 9605 XP_006713578 15 9605 XP_006713096 15 9605 XP_006713095 15 9605 NP_055806 15 9605>NP_115927 Length = 1321 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 RLLNRVRR 9 RLLNRVRR Sbjct: 700 RLLNRVRR 707>NP_653223 Length = 773 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 VRLLNRVRR 9 ++LLNRVR+ Sbjct: 271 IQLLNRVRQ 279>NP_065813 Length = 1085 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LLNRVRR 9 LLN+VRR Sbjct: 103 LLNQVRR 109>NP_001121190 Length = 1668 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VRLLNRVR 8 V +LNR+R Sbjct: 335 VHMLNRIR 342>NP_001121189 Length = 3277 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VRLLNRVR 8 V +LNR+R Sbjct: 1944 VHMLNRIR 1951>NP_001186017 Length = 612 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VRLLNRVRR 9 VRL N++RR Sbjct: 35 VRLSNQMRR 43>NP_001186016 Length = 627 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VRLLNRVRR 9 VRL N++RR Sbjct: 35 VRLSNQMRR 43>NP_001002006 Length = 610 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VRLLNRVRR 9 VRL N++RR Sbjct: 35 VRLSNQMRR 43>NP_001186033 Length = 602 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VRLLNRVRR 9 VRL N++RR Sbjct: 35 VRLSNQMRR 43>NP_001180308 Length = 533 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VRLLNRVRR 9 +RL+ R+RR Sbjct: 217 IRLVRRLRR 225>NP_001070254 Length = 1735 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VRLLNRVRR 9 VR+ NR RR Sbjct: 1170 VRMPNRTRR 1178>NP_060329 Length = 548 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VRLLNRVRR 9 +RL+ R+RR Sbjct: 232 IRLVRRLRR 240>XP_006723876 Length = 432 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VRLLNRVRR 9 +RL+ R+RR Sbjct: 116 IRLVRRLRR 124>XP_006723875 Length = 442 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VRLLNRVRR 9 +RL+ R+RR Sbjct: 124 IRLVRRLRR 132>XP_006723874 Length = 542 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VRLLNRVRR 9 +RL+ R+RR Sbjct: 224 IRLVRRLRR 232>XP_006723873 Length = 549 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VRLLNRVRR 9 +RL+ R+RR Sbjct: 231 IRLVRRLRR 239>XP_006723872 Length = 550 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VRLLNRVRR 9 +RL+ R+RR Sbjct: 232 IRLVRRLRR 240>XP_005260273 Length = 556 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VRLLNRVRR 9 +RL+ R+RR Sbjct: 240 IRLVRRLRR 248>XP_006723871 Length = 557 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VRLLNRVRR 9 +RL+ R+RR Sbjct: 239 IRLVRRLRR 247>XP_006723870 Length = 557 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VRLLNRVRR 9 +RL+ R+RR Sbjct: 240 IRLVRRLRR 248>XP_006723869 Length = 558 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VRLLNRVRR 9 +RL+ R+RR Sbjct: 240 IRLVRRLRR 248>XP_005269099 Length = 1062 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LLNRVRR 9 LLN+VRR Sbjct: 103 LLNQVRR 109>XP_006718388 Length = 1331 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VRLLNRVRR 9 VR+ NR RR Sbjct: 1233 VRMPNRTRR 1241>XP_006718387 Length = 1798 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VRLLNRVRR 9 VR+ NR RR Sbjct: 1233 VRMPNRTRR 1241>XP_006718386 Length = 1822 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VRLLNRVRR 9 VR+ NR RR Sbjct: 1233 VRMPNRTRR 1241>NP_001229825 Length = 1603 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 LNRVRR 9 LNR+RR Sbjct: 993 LNRIRR 998>NP_001229826 Length = 1503 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 LNRVRR 9 LNR+RR Sbjct: 915 LNRIRR 920>NP_653319 Length = 855 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 RLLNRVRR 9 +LLN+V+R Sbjct: 292 QLLNKVKR 299>NP_060050 Length = 708 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 VRLLNR 6 VRLLNR Sbjct: 300 VRLLNR 305>NP_055477 Length = 1572 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 LNRVRR 9 LNR+RR Sbjct: 984 LNRIRR 989>NP_001129501 Length = 1594 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 LNRVRR 9 LNR+RR Sbjct: 984 LNRIRR 989>NP_619520 Length = 1194 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VRLLNRVRR 9 VRLL +RR Sbjct: 1135 VRLLKELRR 1143>NP_055781 Length = 1155 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VRLLNRVRR 9 VRLL +RR Sbjct: 1096 VRLLKELRR 1104>NP_006276 Length = 626 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 VRLLNRVR 8 V+L+NR+R Sbjct: 101 VQLMNRLR 108>XP_005261924 Length = 1176 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 LNRVRR 9 LNR+RR Sbjct: 993 LNRIRR 998>XP_006724450 Length = 1187 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 LNRVRR 9 LNR+RR Sbjct: 993 LNRIRR 998>XP_006724449 Length = 1198 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 LNRVRR 9 LNR+RR Sbjct: 993 LNRIRR 998>XP_005261923 Length = 1307 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 LNRVRR 9 LNR+RR Sbjct: 993 LNRIRR 998>XP_006724448 Length = 1490 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 LNRVRR 9 LNR+RR Sbjct: 880 LNRIRR 885>XP_006724447 Length = 1516 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 LNRVRR 9 LNR+RR Sbjct: 906 LNRIRR 911>XP_005261922 Length = 1525 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 LNRVRR 9 LNR+RR Sbjct: 915 LNRIRR 920>XP_005261921 Length = 1581 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 LNRVRR 9 LNR+RR Sbjct: 993 LNRIRR 998>XP_005261920 Length = 1594 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 LNRVRR 9 LNR+RR Sbjct: 984 LNRIRR 989>XP_005261919 Length = 1603 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 LNRVRR 9 LNR+RR Sbjct: 993 LNRIRR 998>XP_005269983 Length = 708 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 VRLLNR 6 VRLLNR Sbjct: 300 VRLLNR 305>XP_005269982 Length = 734 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 VRLLNR 6 VRLLNR Sbjct: 326 VRLLNR 331>XP_006717970 Length = 734 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 VRLLNR 6 VRLLNR Sbjct: 326 VRLLNR 331>XP_006714215 Length = 3544 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 VRLLNRVRR 9 VRLL VRR Sbjct: 1138 VRLLTVVRR 1146>XP_006714214 Length = 3544 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 VRLLNRVRR 9 VRLL VRR Sbjct: 1138 VRLLTVVRR 1146>XP_005262915 Length = 3544 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 VRLLNRVRR 9 VRLL VRR Sbjct: 1138 VRLLTVVRR 1146>XP_006713578 Length = 855 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 RLLNRVRR 9 +LLN+V+R Sbjct: 292 QLLNKVKR 299>XP_006713096 Length = 1162 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VRLLNRVRR 9 VRLL +RR Sbjct: 1103 VRLLKELRR 1111>XP_006713095 Length = 1222 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VRLLNRVRR 9 VRLL +RR Sbjct: 1163 VRLLKELRR 1171>NP_055806 Length = 3526 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 VRLLNRVRR 9 VRLL VRR Sbjct: 1120 VRLLTVVRR 1128Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.350 0.157 0.418 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 347,686 Number of extensions: 568 Number of successful extensions: 54 Number of sequences better than 10000.0: 54 Number of HSP's gapped: 54 Number of HSP's successfully gapped: 54 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 14 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |