Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_008835 19 665 NP_001075109 19 665 NP_064544 17 2528 NP_001241878 17 2528 NP_006234 17 4312 NP_001186685 17 4312 NP_001155197 17 4312 NP_848702 17 4312 NP_001155198 17 4312 NP_848701 17 4312 NP_002710 17 4312 NP_001269109 17 4312 NP_006237 17 4312 NP_001269111 17 4312 NP_001269110 17 4312 NP_001269108 17 4312 XP_005267884 17 4312 XP_005267883 17 4312 XP_005267881 17 4312 XP_005267880 17 4312 XP_005267879 17 4312 XP_005267877 17 4312 XP_005267876 17 4312 NP_060587 16 5631 XP_005270020 16 5631 XP_005270019 16 5631 NP_001275964 16 7355 NP_001275963 16 7355 NP_612352 16 7355 NP_958930 16 7355 NP_958929 16 7355 NP_958931 16 7355 NP_001121902 15 9605 NP_001121901 15 9605 NP_001012977 15 9605 NP_001012975 15 9605 NP_001158016 15 9605 NP_001158014 15 9605 NP_001158013 15 9605 NP_001158012 15 9605 NP_001158011 15 9605 NP_001158010 15 9605 NP_001001850 15 9605 NP_061132 15 9605 NP_001158009 15 9605 XP_006721093 15 9605 XP_006721091 15 9605 XP_006714339 15 9605 XP_006714338 15 9605 XP_005247513 15 9605 XP_005247512 15 9605>NP_008835 Length = 4128 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 VRKSLNNIE 9 VRKSLN+IE Sbjct: 69 VRKSLNSIE 77>NP_001075109 Length = 4097 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 VRKSLNNIE 9 VRKSLN+IE Sbjct: 69 VRKSLNSIE 77>NP_064544 Length = 1026 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 VRKSLNNIE 9 ++KS+NN+E Sbjct: 758 LKKSINNLE 766>NP_001241878 Length = 596 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 VRKSLNNIE 9 ++KS+NN+E Sbjct: 328 LKKSINNLE 336>NP_006234 Length = 486 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VRKSLNNI 8 +RK +NNI Sbjct: 225 IRKQINNI 232>NP_001186685 Length = 429 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VRKSLNNI 8 +RK +NNI Sbjct: 168 IRKQINNI 175>NP_001155197 Length = 555 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VRKSLNNI 8 +RK +NNI Sbjct: 231 IRKQINNI 238>NP_848702 Length = 449 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VRKSLNNI 8 +RK +NNI Sbjct: 200 IRKQINNI 207>NP_001155198 Length = 540 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VRKSLNNI 8 +RK +NNI Sbjct: 255 IRKQINNI 262>NP_848701 Length = 485 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VRKSLNNI 8 +RK +NNI Sbjct: 200 IRKQINNI 207>NP_002710 Length = 524 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VRKSLNNI 8 +RK +NNI Sbjct: 200 IRKQINNI 207>NP_001269109 Length = 462 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VRKSLNNI 8 +RK +NNI Sbjct: 217 IRKQINNI 224>NP_006237 Length = 467 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VRKSLNNI 8 +RK +NNI Sbjct: 217 IRKQINNI 224>NP_001269111 Length = 391 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VRKSLNNI 8 +RK +NNI Sbjct: 141 IRKQINNI 148>NP_001269110 Length = 391 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VRKSLNNI 8 +RK +NNI Sbjct: 141 IRKQINNI 148>NP_001269108 Length = 467 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VRKSLNNI 8 +RK +NNI Sbjct: 217 IRKQINNI 224>XP_005267884 Length = 449 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VRKSLNNI 8 +RK +NNI Sbjct: 125 IRKQINNI 132>XP_005267883 Length = 500 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VRKSLNNI 8 +RK +NNI Sbjct: 176 IRKQINNI 183>XP_005267881 Length = 539 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VRKSLNNI 8 +RK +NNI Sbjct: 260 IRKQINNI 267>XP_005267880 Length = 545 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VRKSLNNI 8 +RK +NNI Sbjct: 260 IRKQINNI 267>XP_005267879 Length = 556 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VRKSLNNI 8 +RK +NNI Sbjct: 260 IRKQINNI 267>XP_005267877 Length = 579 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VRKSLNNI 8 +RK +NNI Sbjct: 255 IRKQINNI 262>XP_005267876 Length = 584 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VRKSLNNI 8 +RK +NNI Sbjct: 260 IRKQINNI 267>NP_060587 Length = 1224 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VRKSLNNI 8 VR+S NNI Sbjct: 316 VRRSYNNI 323>XP_005270020 Length = 965 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VRKSLNNI 8 VR+S NNI Sbjct: 57 VRRSYNNI 64>XP_005270019 Length = 965 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VRKSLNNI 8 VR+S NNI Sbjct: 57 VRRSYNNI 64>NP_001275964 Length = 542 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VRKSLNNIE 9 +R+S+ NIE Sbjct: 71 LRRSMENIE 79>NP_001275963 Length = 619 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VRKSLNNIE 9 +R+S+ NIE Sbjct: 71 LRRSMENIE 79>NP_612352 Length = 315 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VRKSLNNIE 9 +R+S+ NIE Sbjct: 71 LRRSMENIE 79>NP_958930 Length = 619 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VRKSLNNIE 9 +R+S+ NIE Sbjct: 71 LRRSMENIE 79>NP_958929 Length = 619 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VRKSLNNIE 9 +R+S+ NIE Sbjct: 71 LRRSMENIE 79>NP_958931 Length = 637 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VRKSLNNIE 9 +R+S+ NIE Sbjct: 89 LRRSMENIE 97>NP_001121902 Length = 1028 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 VRKSLNNI 8 ++KS+NN+ Sbjct: 758 LKKSINNL 765>NP_001121901 Length = 1028 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 VRKSLNNI 8 ++KS+NN+ Sbjct: 758 LKKSINNL 765>NP_001012977 Length = 678 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VRKSLNNIE 9 +RK +N+IE Sbjct: 574 LRKKVNDIE 582>NP_001012975 Length = 832 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VRKSLNNIE 9 +RK +N+IE Sbjct: 574 LRKKVNDIE 582>NP_001158016 Length = 662 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VRKSLNNIE 9 +RK +N+IE Sbjct: 574 LRKKVNDIE 582>NP_001158014 Length = 681 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VRKSLNNIE 9 +RK +N+IE Sbjct: 574 LRKKVNDIE 582>NP_001158013 Length = 695 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VRKSLNNIE 9 +RK +N+IE Sbjct: 574 LRKKVNDIE 582>NP_001158012 Length = 732 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VRKSLNNIE 9 +RK +N+IE Sbjct: 452 LRKKVNDIE 460>NP_001158011 Length = 755 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VRKSLNNIE 9 +RK +N+IE Sbjct: 574 LRKKVNDIE 582>NP_001158010 Length = 803 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VRKSLNNIE 9 +RK +N+IE Sbjct: 574 LRKKVNDIE 582>NP_001001850 Length = 294 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KSLNNIE 9 +S+NNIE Sbjct: 245 ESINNIE 251>NP_061132 Length = 854 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VRKSLNNIE 9 +RK +N+IE Sbjct: 574 LRKKVNDIE 582>NP_001158009 Length = 886 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VRKSLNNIE 9 +RK +N+IE Sbjct: 606 LRKKVNDIE 614>XP_006721093 Length = 220 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 RKSLNNIE 9 RKS+N+I+ Sbjct: 207 RKSINSIK 214>XP_006721091 Length = 280 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 RKSLNNIE 9 RKS+N+I+ Sbjct: 267 RKSINSIK 274>XP_006714339 Length = 795 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 VRKSLNNI 8 ++KS+NN+ Sbjct: 525 LKKSINNL 532>XP_006714338 Length = 998 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 VRKSLNNI 8 ++KS+NN+ Sbjct: 728 LKKSINNL 735>XP_005247513 Length = 294 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KSLNNIE 9 +S+NNIE Sbjct: 245 ESINNIE 251>XP_005247512 Length = 294 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KSLNNIE 9 +S+NNIE Sbjct: 245 ESINNIE 251Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.307 0.127 0.305 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 413,292 Number of extensions: 667 Number of successful extensions: 51 Number of sequences better than 10000.0: 51 Number of HSP's gapped: 51 Number of HSP's successfully gapped: 51 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.4 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |