Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001128523 18 1482 NP_065991 18 1482 NP_891992 17 3301 NP_570115 17 4312 NP_056475 17 4312 NP_079239 17 4312 NP_001139681 17 4312 NP_001230713 17 4312 NP_001137311 17 4312 NP_002590 17 4312 NP_001243496 17 4312 NP_000691 17 4312 NP_000741 17 4312 NP_001138740 17 4312 NP_542141 17 4312 NP_112598 17 4312 XP_005260338 17 4312 XP_005274097 17 4312 XP_006715959 17 4312 XP_005249911 17 4312 XP_005249910 17 4312 NP_001005479 17 4312 NP_001245308 16 5631 NP_001257436 16 5631 NP_003606 16 5631 NP_001245309 16 5631 NP_001257437 16 5631 NP_006281 16 5631 NP_056009 16 5631 NP_005679 16 5631 NP_061738 16 5631 NP_114398 16 5631 XP_005258187 16 5631 XP_005267176 16 5631 XP_005247116 16 5631 XP_005247115 16 5631 XP_005265658 16 5631 XP_005265657 16 5631 XP_005265656 16 5631 XP_005265655 16 5631 XP_006713484 16 5631 NP_001073678 16 5631 NP_037365 16 7355 NP_005100 16 7355 NP_689607 16 7355 XP_005247176 16 7355 XP_006713561 16 7355 XP_005265695 16 7355 XP_005246523 16 7355 XP_005246522 16 7355 NP_001238892 15 9605 NP_060661 15 9605 NP_005992 15 9605 NP_002449 15 9605 NP_001238891 15 9605 NP_057043 15 9605 NP_525125 15 9605 NP_056410 15 9605 NP_005754 15 9605 NP_004362 15 9605 NP_001091868 15 9605 NP_006553 15 9605 NP_002680 15 9605 NP_001009905 15 9605 NP_997195 15 9605 NP_001137484 15 9605 XP_006726603 15 9605 XP_006725352 15 9605 XP_006725215 15 9605 XP_005247381 15 9605 XP_006725061 15 9605 XP_006722336 15 9605 XP_006722335 15 9605 XP_005266498 15 9605 XP_006719237 15 9605 XP_005269500 15 9605>NP_001128523 Length = 738 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VRKLVALCG 9 V+KL+ LCG Sbjct: 132 VQKLIRLCG 140>NP_065991 Length = 765 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VRKLVALCG 9 V+KL+ LCG Sbjct: 132 VQKLIRLCG 140>NP_891992 Length = 580 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VRKLVALCG 9 +RK++A CG Sbjct: 16 IRKVLAKCG 24>NP_570115 Length = 306 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VRKLVALCG 9 +R+LVA CG Sbjct: 174 LRELVAECG 182>NP_056475 Length = 337 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 KLVALCG 9 KLVA CG Sbjct: 170 KLVAACG 176>NP_079239 Length = 718 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 RKLVALC 8 RKL ALC Sbjct: 57 RKLAALC 63>NP_001139681 Length = 932 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RKLVALCG 9 RK++ LCG Sbjct: 219 RKILQLCG 226>NP_001230713 Length = 920 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RKLVALCG 9 RK++ LCG Sbjct: 207 RKILQLCG 214>NP_001137311 Length = 934 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RKLVALCG 9 RK++ LCG Sbjct: 221 RKILQLCG 228>NP_002590 Length = 941 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RKLVALCG 9 RK++ LCG Sbjct: 228 RKILQLCG 235>NP_001243496 Length = 231 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LVALCG 9 LVALCG Sbjct: 12 LVALCG 17>NP_000691 Length = 346 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LVALCG 9 LVALCG Sbjct: 339 LVALCG 344>NP_000741 Length = 498 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LVALCG 9 LVALCG Sbjct: 12 LVALCG 17>NP_001138740 Length = 392 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RKLVALCG 9 R LVA+CG Sbjct: 100 RVLVAVCG 107>NP_542141 Length = 249 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 KLVALCG 9 KLV LCG Sbjct: 6 KLVLLCG 12>NP_112598 Length = 5088 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 RKLVALC 8 R+LVALC Sbjct: 1484 RELVALC 1490>XP_005260338 Length = 249 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 KLVALCG 9 KLV LCG Sbjct: 6 KLVLLCG 12>XP_005274097 Length = 940 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RKLVALCG 9 RK++ LCG Sbjct: 227 RKILQLCG 234>XP_006715959 Length = 385 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RKLVALCG 9 R LVA+CG Sbjct: 100 RVLVAVCG 107>XP_005249911 Length = 672 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 RKLVALC 8 RKL ALC Sbjct: 57 RKLAALC 63>XP_005249910 Length = 801 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 RKLVALC 8 RKL ALC Sbjct: 57 RKLAALC 63>NP_001005479 Length = 325 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VRKLVALCG 9 +RK V+ CG Sbjct: 250 IRKAVSTCG 258>NP_001245308 Length = 1131 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VRKLVALC 8 VRKL+ LC Sbjct: 999 VRKLMDLC 1006>NP_001257436 Length = 790 Score = 16.2 bits (30), Expect = 5631 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 VRKLVAL 7 VRKLVAL Sbjct: 89 VRKLVAL 95>NP_003606 Length = 1214 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VRKLVALC 8 VRKL+ LC Sbjct: 1118 VRKLMDLC 1125>NP_001245309 Length = 1090 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VRKLVALC 8 VRKL+ LC Sbjct: 994 VRKLMDLC 1001>NP_001257437 Length = 790 Score = 16.2 bits (30), Expect = 5631 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 VRKLVAL 7 VRKLVAL Sbjct: 89 VRKLVAL 95>NP_006281 Length = 790 Score = 16.2 bits (30), Expect = 5631 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 VRKLVAL 7 VRKLVAL Sbjct: 89 VRKLVAL 95>NP_056009 Length = 1006 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VRKLVALCG 9 V+KL+ CG Sbjct: 659 VKKLIERCG 667>NP_005679 Length = 1437 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 KLVALCG 9 KLV +CG Sbjct: 589 KLVGICG 595>NP_061738 Length = 932 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 RKLVALC 8 RKLV LC Sbjct: 11 RKLVLLC 17>NP_114398 Length = 823 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 RKLVALC 8 RKLV LC Sbjct: 11 RKLVLLC 17>XP_005258187 Length = 621 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 LVALCG 9 L+ALCG Sbjct: 54 LIALCG 59>XP_005267176 Length = 790 Score = 16.2 bits (30), Expect = 5631 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 VRKLVAL 7 VRKLVAL Sbjct: 89 VRKLVAL 95>XP_005247116 Length = 1437 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 KLVALCG 9 KLV +CG Sbjct: 589 KLVGICG 595>XP_005247115 Length = 1437 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 KLVALCG 9 KLV +CG Sbjct: 589 KLVGICG 595>XP_005265658 Length = 1095 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VRKLVALC 8 VRKL+ LC Sbjct: 999 VRKLMDLC 1006>XP_005265657 Length = 1113 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VRKLVALC 8 VRKL+ LC Sbjct: 981 VRKLMDLC 988>XP_005265656 Length = 1118 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VRKLVALC 8 VRKL+ LC Sbjct: 986 VRKLMDLC 993>XP_005265655 Length = 1126 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VRKLVALC 8 VRKL+ LC Sbjct: 994 VRKLMDLC 1001>XP_006713484 Length = 1255 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VRKLVALC 8 VRKL+ LC Sbjct: 1123 VRKLMDLC 1130>NP_001073678 Length = 621 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 LVALCG 9 L+ALCG Sbjct: 54 LIALCG 59>NP_037365 Length = 545 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RKLVALC 8 RKL++LC Sbjct: 311 RKLLSLC 317>NP_005100 Length = 527 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 RKLVALC 8 RK+++LC Sbjct: 265 RKMISLC 271>NP_689607 Length = 663 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 KLVALC 8 KL+ALC Sbjct: 637 KLIALC 642>XP_005247176 Length = 517 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 KLVALC 8 KL+ALC Sbjct: 491 KLIALC 496>XP_006713561 Length = 616 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 KLVALC 8 KL+ALC Sbjct: 590 KLIALC 595>XP_005265695 Length = 460 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 RKLVALC 8 RK+++LC Sbjct: 198 RKMISLC 204>XP_005246523 Length = 381 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RKLVALC 8 RKL++LC Sbjct: 147 RKLLSLC 153>XP_005246522 Length = 524 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RKLVALC 8 RKL++LC Sbjct: 311 RKLLSLC 317>NP_001238892 Length = 791 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 VRKLVALC 8 V KLV LC Sbjct: 613 VSKLVRLC 620>NP_060661 Length = 531 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 RKLVALCG 9 +KL LCG Sbjct: 66 KKLEGLCG 73>NP_005992 Length = 450 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 VRKLVALC 8 +RKL LC Sbjct: 122 IRKLADLC 129>NP_002449 Length = 5762 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 LVALCG 9 L+A+CG Sbjct: 1285 LIAICG 1290>NP_001238891 Length = 871 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 VRKLVALC 8 V KLV LC Sbjct: 613 VSKLVRLC 620>NP_057043 Length = 296 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 VRKLVALC 8 VRKL LC Sbjct: 39 VRKLPPLC 46>NP_525125 Length = 450 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 VRKLVALC 8 +RKL LC Sbjct: 122 IRKLADLC 129>NP_056410 Length = 871 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 VRKLVALC 8 V KLV LC Sbjct: 613 VSKLVRLC 620>NP_005754 Length = 926 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 KLVALC 8 KLVA+C Sbjct: 348 KLVAIC 353>NP_004362 Length = 1224 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 RKLVALC 8 RKL ALC Sbjct: 516 RKLDALC 522>NP_001091868 Length = 1233 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 RKLVALC 8 RKL ALC Sbjct: 525 RKLDALC 531>NP_006553 Length = 281 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VRKLVALCG 9 VR+ +LCG Sbjct: 47 VRRSYSLCG 55>NP_002680 Length = 598 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 VRKLVALC 8 + KLV LC Sbjct: 24 IEKLVELC 31>NP_001009905 Length = 361 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 RKLVALC 8 RK+VA C Sbjct: 286 RKVVAFC 292>NP_997195 Length = 450 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 VRKLVALC 8 +RKL LC Sbjct: 122 IRKLADLC 129>NP_001137484 Length = 258 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 VRKLVALC 8 VRKL LC Sbjct: 39 VRKLPPLC 46>XP_006726603 Length = 1264 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 LVALCG 9 L+A+CG Sbjct: 1059 LIAICG 1064>XP_006725352 Length = 332 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 RKLVALC 8 RK+VA C Sbjct: 271 RKVVAFC 277>XP_006725215 Length = 1264 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 LVALCG 9 L+A+CG Sbjct: 1059 LIAICG 1064>XP_005247381 Length = 376 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 VRKLVALC 8 V KLV LC Sbjct: 118 VSKLVRLC 125>XP_006725061 Length = 904 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 VRKLVALC 8 V KLV LC Sbjct: 646 VSKLVRLC 653>XP_006722336 Length = 332 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 RKLVALC 8 RK+VA C Sbjct: 271 RKVVAFC 277>XP_006722335 Length = 361 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 RKLVALC 8 RK+VA C Sbjct: 286 RKVVAFC 292>XP_005266498 Length = 531 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 RKLVALCG 9 +KL LCG Sbjct: 66 KKLEGLCG 73>XP_006719237 Length = 1263 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 LVALCG 9 L+A+CG Sbjct: 1059 LIAICG 1064>XP_005269500 Length = 281 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VRKLVALCG 9 VR+ +LCG Sbjct: 47 VRRSYSLCG 55Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.338 0.150 0.473 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 537,001 Number of extensions: 825 Number of successful extensions: 76 Number of sequences better than 10000.0: 76 Number of HSP's gapped: 76 Number of HSP's successfully gapped: 76 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.4 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |