Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_444256 20 509 NP_444254 20 509 NP_444253 20 509 NP_444255 20 509 XP_005247551 20 509 XP_005247550 20 509 XP_006713712 20 509 XP_005247549 20 509 NP_055921 16 5631 XP_006713125 16 5631 XP_006713124 16 5631 NP_001242904 16 7355 NP_001008496 16 7355 NP_005742 15 9605 NP_671714 15 9605 NP_056477 15 9605 NP_001268451 15 9605 NP_001191055 15 9605 NP_001268449 15 9605 NP_006143 15 9605 NP_001191056 15 9605 NP_877954 15 9605 NP_001268450 15 9605 NP_115874 15 9605 NP_003557 15 9605 XP_005260916 15 9605 XP_006719694 15 9605 XP_005253431 15 9605 XP_006719140 15 9605 XP_006719139 15 9605 XP_005253429 15 9605 XP_006719138 15 9605 XP_005253428 15 9605 XP_005253427 15 9605 XP_005269821 15 9605 XP_006715890 15 9605 XP_005250160 15 9605 XP_005250159 15 9605 XP_006712050 15 9605 XP_005264311 15 9605 XP_006712049 15 9605 NP_001121687 15 9605>NP_444256 Length = 1794 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 VRKEVTNLI 9 VRKEVTN+I Sbjct: 271 VRKEVTNVI 279>NP_444254 Length = 1845 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 VRKEVTNLI 9 VRKEVTN+I Sbjct: 271 VRKEVTNVI 279>NP_444253 Length = 1914 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 VRKEVTNLI 9 VRKEVTN+I Sbjct: 271 VRKEVTNVI 279>NP_444255 Length = 1863 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 VRKEVTNLI 9 VRKEVTN+I Sbjct: 271 VRKEVTNVI 279>XP_005247551 Length = 1855 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 VRKEVTNLI 9 VRKEVTN+I Sbjct: 281 VRKEVTNVI 289>XP_005247550 Length = 1856 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 VRKEVTNLI 9 VRKEVTN+I Sbjct: 281 VRKEVTNVI 289>XP_006713712 Length = 1923 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 VRKEVTNLI 9 VRKEVTN+I Sbjct: 281 VRKEVTNVI 289>XP_005247549 Length = 1924 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 VRKEVTNLI 9 VRKEVTN+I Sbjct: 281 VRKEVTNVI 289>NP_055921 Length = 1467 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RKEVTNLI 9 RKEV NL+ Sbjct: 900 RKEVENLL 907>XP_006713125 Length = 1467 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RKEVTNLI 9 RKEV NL+ Sbjct: 900 RKEVENLL 907>XP_006713124 Length = 1467 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RKEVTNLI 9 RKEV NL+ Sbjct: 900 RKEVENLL 907>NP_001242904 Length = 873 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VRKEVTN 7 +R+EVTN Sbjct: 310 IREEVTN 316>NP_001008496 Length = 882 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VRKEVTN 7 +R+EVTN Sbjct: 310 IREEVTN 316>NP_005742 Length = 3907 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 KEVTNL 8 KE+TNL Sbjct: 2203 KEITNL 2208>NP_671714 Length = 3899 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 KEVTNL 8 KE+TNL Sbjct: 2195 KEITNL 2200>NP_056477 Length = 1749 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 KEVTNL 8 KE+TNL Sbjct: 281 KEITNL 286>NP_001268451 Length = 793 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 EVTNLI 9 EVTNLI Sbjct: 133 EVTNLI 138>NP_001191055 Length = 499 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 VRKEVTNLI 9 ++KE+TN + Sbjct: 190 LKKEITNCL 198>NP_001268449 Length = 840 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 EVTNLI 9 EVTNLI Sbjct: 133 EVTNLI 138>NP_006143 Length = 499 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 VRKEVTNLI 9 ++KE+TN + Sbjct: 190 LKKEITNCL 198>NP_001191056 Length = 499 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 VRKEVTNLI 9 ++KE+TN + Sbjct: 190 LKKEITNCL 198>NP_877954 Length = 824 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 EVTNLI 9 EVTNLI Sbjct: 133 EVTNLI 138>NP_001268450 Length = 880 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 EVTNLI 9 EVTNLI Sbjct: 133 EVTNLI 138>NP_115874 Length = 840 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 EVTNLI 9 EVTNLI Sbjct: 133 EVTNLI 138>NP_003557 Length = 1411 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 KEVTNL 8 KE+TNL Sbjct: 1156 KEITNL 1161>XP_005260916 Length = 581 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 EVTNLI 9 EVTNLI Sbjct: 133 EVTNLI 138>XP_006719694 Length = 1465 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 KEVTNL 8 KE+TNL Sbjct: 1210 KEITNL 1215>XP_005253431 Length = 499 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 VRKEVTNLI 9 ++KE+TN + Sbjct: 190 LKKEITNCL 198>XP_006719140 Length = 446 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 VRKEVTNLI 9 ++KE+TN + Sbjct: 137 LKKEITNCL 145>XP_006719139 Length = 499 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 VRKEVTNLI 9 ++KE+TN + Sbjct: 190 LKKEITNCL 198>XP_005253429 Length = 499 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 VRKEVTNLI 9 ++KE+TN + Sbjct: 190 LKKEITNCL 198>XP_006719138 Length = 499 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 VRKEVTNLI 9 ++KE+TN + Sbjct: 190 LKKEITNCL 198>XP_005253428 Length = 499 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 VRKEVTNLI 9 ++KE+TN + Sbjct: 190 LKKEITNCL 198>XP_005253427 Length = 499 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 VRKEVTNLI 9 ++KE+TN + Sbjct: 190 LKKEITNCL 198>XP_005269821 Length = 398 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 EVTNLI 9 EVTNLI Sbjct: 346 EVTNLI 351>XP_006715890 Length = 3860 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 KEVTNL 8 KE+TNL Sbjct: 2156 KEITNL 2161>XP_005250160 Length = 3939 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 KEVTNL 8 KE+TNL Sbjct: 2235 KEITNL 2240>XP_005250159 Length = 3952 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 KEVTNL 8 KE+TNL Sbjct: 2248 KEITNL 2253>XP_006712050 Length = 1716 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 KEVTNL 8 KE+TNL Sbjct: 281 KEITNL 286>XP_005264311 Length = 1727 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 KEVTNL 8 KE+TNL Sbjct: 281 KEITNL 286>XP_006712049 Length = 1728 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 KEVTNL 8 KE+TNL Sbjct: 260 KEITNL 265>NP_001121687 Length = 423 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 EVTNLI 9 EVTNLI Sbjct: 371 EVTNLI 376Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.320 0.136 0.332 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 446,871 Number of extensions: 742 Number of successful extensions: 42 Number of sequences better than 10000.0: 42 Number of HSP's gapped: 42 Number of HSP's successfully gapped: 42 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |