Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000213 18 1135 NP_001087241 18 1135 XP_005265799 18 1135 XP_005265798 18 1135 XP_005265797 18 1135 NP_064716 17 3301 NP_057006 17 4312 NP_001123237 17 4312 NP_940912 17 4312 XP_006724887 17 4312 NP_001747 16 5631 NP_005494 16 7355 NP_001123886 16 7355 NP_689758 16 7355 NP_001154 16 7355 NP_001265043 16 7355 NP_001265042 16 7355 NP_001455 16 7355 XP_006725606 16 7355 XP_005254388 16 7355 XP_006725182 16 7355 XP_006720544 16 7355 XP_006720543 16 7355 XP_005252025 16 7355 XP_005252024 16 7355 XP_006717156 16 7355 XP_005273525 16 7355 XP_005262834 16 7355 XP_006714175 16 7355 XP_005262833 16 7355 NP_694984 15 9605 NP_002026 15 9605 NP_056127 15 9605 NP_001035292 15 9605 NP_001631 15 9605 XP_005262172 15 9605 XP_005262170 15 9605 XP_006723172 15 9605 XP_006723171 15 9605 XP_006723167 15 9605 XP_006723166 15 9605 XP_006723165 15 9605 XP_006723164 15 9605 XP_006723163 15 9605 XP_006723162 15 9605 XP_006723161 15 9605 XP_005266734 15 9605 XP_006722496 15 9605 XP_006714407 15 9605 XP_006714405 15 9605 XP_005263349 15 9605 XP_005263348 15 9605 XP_005263347 15 9605 XP_005263346 15 9605 XP_005263345 15 9605 XP_005263344 15 9605 XP_005263343 15 9605 XP_005263342 15 9605 XP_005263341 15 9605 XP_005263340 15 9605 XP_005263339 15 9605 XP_006714167 15 9605 XP_005265155 15 9605 XP_005265154 15 9605 NP_060689 15 9605>NP_000213 Length = 976 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VRINYVGST 9 VRIN VGST Sbjct: 955 VRINSVGST 963>NP_001087241 Length = 972 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VRINYVGST 9 VRIN VGST Sbjct: 951 VRINSVGST 959>XP_005265799 Length = 973 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VRINYVGST 9 VRIN VGST Sbjct: 952 VRINSVGST 960>XP_005265798 Length = 976 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VRINYVGST 9 VRIN VGST Sbjct: 955 VRINSVGST 963>XP_005265797 Length = 977 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VRINYVGST 9 VRIN VGST Sbjct: 956 VRINSVGST 964>NP_064716 Length = 578 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VRINYVG 7 +RINY+G Sbjct: 166 IRINYLG 172>NP_057006 Length = 373 Score = 16.5 bits (31), Expect = 4312 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 RINYVGS 8 R+NY+G+ Sbjct: 119 RVNYIGT 125>NP_001123237 Length = 373 Score = 16.5 bits (31), Expect = 4312 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 RINYVGS 8 R+NY+G+ Sbjct: 119 RVNYIGT 125>NP_940912 Length = 1313 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VRINYVG 7 VR+NY+G Sbjct: 477 VRLNYLG 483>XP_006724887 Length = 373 Score = 16.5 bits (31), Expect = 4312 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 RINYVGS 8 R+NY+G+ Sbjct: 119 RVNYIGT 125>NP_001747 Length = 405 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 VRINYVGS 8 V++NYVG+ Sbjct: 253 VQMNYVGN 260>NP_005494 Length = 749 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 NYVGST 9 NY+GST Sbjct: 375 NYLGST 380>NP_001123886 Length = 737 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 NYVGST 9 NY+GST Sbjct: 375 NYLGST 380>NP_689758 Length = 473 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 RINYVG 7 R+NY+G Sbjct: 220 RLNYIG 225>NP_001154 Length = 837 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 NYVGST 9 NY+GST Sbjct: 464 NYLGST 469>NP_001265043 Length = 672 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 NYVGST 9 NYVG+T Sbjct: 276 NYVGAT 281>NP_001265042 Length = 716 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 NYVGST 9 NYVG+T Sbjct: 257 NYVGAT 262>NP_001455 Length = 735 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 NYVGST 9 NYVG+T Sbjct: 276 NYVGAT 281>XP_006725606 Length = 737 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 NYVGST 9 NY+GST Sbjct: 375 NYLGST 380>XP_005254388 Length = 749 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 NYVGST 9 NY+GST Sbjct: 375 NYLGST 380>XP_006725182 Length = 705 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 NYVGST 9 NYVG+T Sbjct: 276 NYVGAT 281>XP_006720544 Length = 778 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 NYVGST 9 NY+GST Sbjct: 375 NYLGST 380>XP_006720543 Length = 790 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 NYVGST 9 NY+GST Sbjct: 375 NYLGST 380>XP_005252025 Length = 826 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 NYVGST 9 NY+GST Sbjct: 464 NYLGST 469>XP_005252024 Length = 837 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 NYVGST 9 NY+GST Sbjct: 464 NYLGST 469>XP_006717156 Length = 837 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 NYVGST 9 NY+GST Sbjct: 464 NYLGST 469>XP_005273525 Length = 705 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 NYVGST 9 NYVG+T Sbjct: 276 NYVGAT 281>XP_005262834 Length = 431 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 RINYVG 7 R+NY+G Sbjct: 178 RLNYIG 183>XP_006714175 Length = 432 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 RINYVG 7 R+NY+G Sbjct: 179 RLNYIG 184>XP_005262833 Length = 472 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 RINYVG 7 R+NY+G Sbjct: 219 RLNYIG 224>NP_694984 Length = 1802 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VRINYVGS 8 +RI Y+GS Sbjct: 342 IRIYYLGS 349>NP_002026 Length = 332 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 INYVGS 8 INY+GS Sbjct: 144 INYLGS 149>NP_056127 Length = 5005 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 RINYVGST 9 R++Y+GS+ Sbjct: 4504 RVDYMGSS 4511>NP_001035292 Length = 311 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 RINYVGST 9 ++NY+GS+ Sbjct: 266 QLNYLGSS 273>NP_001631 Length = 732 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 INYVGST 9 +NY GST Sbjct: 535 VNYRGST 541>XP_005262172 Length = 1631 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VRINYVGS 8 +RI Y+GS Sbjct: 171 IRIYYLGS 178>XP_005262170 Length = 1752 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VRINYVGS 8 +RI Y+GS Sbjct: 342 IRIYYLGS 349>XP_006723172 Length = 286 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 INYVGST 9 +NY+G T Sbjct: 17 VNYLGGT 23>XP_006723171 Length = 310 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 INYVGST 9 +NY+G T Sbjct: 41 VNYLGGT 47>XP_006723167 Length = 431 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 INYVGST 9 +NY+G T Sbjct: 17 VNYLGGT 23>XP_006723166 Length = 432 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 INYVGST 9 +NY+G T Sbjct: 17 VNYLGGT 23>XP_006723165 Length = 432 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 INYVGST 9 +NY+G T Sbjct: 17 VNYLGGT 23>XP_006723164 Length = 432 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 INYVGST 9 +NY+G T Sbjct: 17 VNYLGGT 23>XP_006723163 Length = 455 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 INYVGST 9 +NY+G T Sbjct: 41 VNYLGGT 47>XP_006723162 Length = 456 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 INYVGST 9 +NY+G T Sbjct: 41 VNYLGGT 47>XP_006723161 Length = 456 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 INYVGST 9 +NY+G T Sbjct: 41 VNYLGGT 47>XP_005266734 Length = 298 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 INYVGS 8 INY+GS Sbjct: 144 INYLGS 149>XP_006722496 Length = 303 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 INYVGS 8 INY+GS Sbjct: 115 INYLGS 120>XP_006714407 Length = 5004 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 RINYVGST 9 R++Y+GS+ Sbjct: 4503 RVDYMGSS 4510>XP_006714405 Length = 4103 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 RINYVGST 9 R++Y+GS+ Sbjct: 3602 RVDYMGSS 3609>XP_005263349 Length = 4410 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 RINYVGST 9 R++Y+GS+ Sbjct: 3909 RVDYMGSS 3916>XP_005263348 Length = 4443 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 RINYVGST 9 R++Y+GS+ Sbjct: 3942 RVDYMGSS 3949>XP_005263347 Length = 4640 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 RINYVGST 9 R++Y+GS+ Sbjct: 4525 RVDYMGSS 4532>XP_005263346 Length = 4983 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 RINYVGST 9 R++Y+GS+ Sbjct: 4482 RVDYMGSS 4489>XP_005263345 Length = 4991 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 RINYVGST 9 R++Y+GS+ Sbjct: 4490 RVDYMGSS 4497>XP_005263344 Length = 5005 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 RINYVGST 9 R++Y+GS+ Sbjct: 4504 RVDYMGSS 4511>XP_005263343 Length = 5009 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 RINYVGST 9 R++Y+GS+ Sbjct: 4508 RVDYMGSS 4515>XP_005263342 Length = 5025 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 RINYVGST 9 R++Y+GS+ Sbjct: 4524 RVDYMGSS 4531>XP_005263341 Length = 5026 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 RINYVGST 9 R++Y+GS+ Sbjct: 4525 RVDYMGSS 4532>XP_005263340 Length = 5026 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 RINYVGST 9 R++Y+GS+ Sbjct: 4525 RVDYMGSS 4532>XP_005263339 Length = 5026 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 RINYVGST 9 R++Y+GS+ Sbjct: 4525 RVDYMGSS 4532>XP_006714167 Length = 311 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 RINYVGST 9 ++NY+GS+ Sbjct: 266 QLNYLGSS 273>XP_005265155 Length = 631 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 INYVGST 9 +NY GST Sbjct: 434 VNYRGST 440>XP_005265154 Length = 686 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 INYVGST 9 +NY GST Sbjct: 489 VNYRGST 495>NP_060689 Length = 849 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 NYVGST 9 N+VGST Sbjct: 485 NFVGST 490Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.320 0.137 0.378 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 527,899 Number of extensions: 769 Number of successful extensions: 65 Number of sequences better than 10000.0: 65 Number of HSP's gapped: 65 Number of HSP's successfully gapped: 65 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |