Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_060009 18 1135 XP_006721125 18 1135 NP_115582 17 2528 XP_006721363 17 2528 XP_005256258 17 2528 XP_005256257 17 2528 XP_005256256 17 2528 XP_005256255 17 2528 XP_006721362 17 2528 XP_006721361 17 2528 XP_005256254 17 2528 XP_005256253 17 2528 XP_005256252 17 2528 XP_005256251 17 2528 XP_006721360 17 2528 XP_005256250 17 2528 NP_005119 17 3301 XP_006724131 17 3301 NP_000876 17 4312 XP_005271739 17 4312 NP_003469 17 4312 NP_000760 16 5631 NP_000454 16 5631 NP_000762 16 5631 XP_006717707 16 5631 NP_055141 16 7355 NP_005480 16 7355 NP_001239263 16 7355 NP_001136005 16 7355 NP_733745 16 7355 NP_001136006 16 7355 NP_055073 16 7355 XP_006723744 16 7355 XP_005260304 16 7355 XP_005254325 16 7355 XP_006720513 16 7355 XP_006720512 16 7355 XP_005251694 16 7355 NP_000161 15 9605 NP_001340 15 9605 NP_002363 15 9605 NP_006112 15 9605 XP_006714679 15 9605 XP_005248188 15 9605 XP_005264214 15 9605 NP_689729 15 9605>NP_060009 Length = 4116 Score = 18.5 bits (36), Expect = 1135 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 VRESLVNLG 9 VR SL+NLG Sbjct: 3890 VRRSLINLG 3898>XP_006721125 Length = 4070 Score = 18.5 bits (36), Expect = 1135 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 VRESLVNLG 9 VR SL+NLG Sbjct: 3844 VRRSLINLG 3852>NP_115582 Length = 1866 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 VRESLVNLG 9 VRE+ VNLG Sbjct: 1301 VREASVNLG 1309>XP_006721363 Length = 1385 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 VRESLVNLG 9 VRE+ VNLG Sbjct: 1301 VREASVNLG 1309>XP_005256258 Length = 1397 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 VRESLVNLG 9 VRE+ VNLG Sbjct: 1270 VREASVNLG 1278>XP_005256257 Length = 1405 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 VRESLVNLG 9 VRE+ VNLG Sbjct: 1301 VREASVNLG 1309>XP_005256256 Length = 1427 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 VRESLVNLG 9 VRE+ VNLG Sbjct: 1300 VREASVNLG 1308>XP_005256255 Length = 1809 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 VRESLVNLG 9 VRE+ VNLG Sbjct: 1244 VREASVNLG 1252>XP_006721362 Length = 1810 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 VRESLVNLG 9 VRE+ VNLG Sbjct: 1301 VREASVNLG 1309>XP_006721361 Length = 1836 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 VRESLVNLG 9 VRE+ VNLG Sbjct: 1271 VREASVNLG 1279>XP_005256254 Length = 1837 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 VRESLVNLG 9 VRE+ VNLG Sbjct: 1272 VREASVNLG 1280>XP_005256253 Length = 1838 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 VRESLVNLG 9 VRE+ VNLG Sbjct: 1273 VREASVNLG 1281>XP_005256252 Length = 1865 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 VRESLVNLG 9 VRE+ VNLG Sbjct: 1300 VREASVNLG 1308>XP_005256251 Length = 1866 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 VRESLVNLG 9 VRE+ VNLG Sbjct: 1301 VREASVNLG 1309>XP_006721360 Length = 1866 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 VRESLVNLG 9 VRE+ VNLG Sbjct: 1301 VREASVNLG 1309>XP_005256250 Length = 1866 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 VRESLVNLG 9 VRE+ VNLG Sbjct: 1301 VREASVNLG 1309>NP_005119 Length = 2298 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 ESLVNLG 9 ESL+NLG Sbjct: 1421 ESLINLG 1427>XP_006724131 Length = 2298 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 ESLVNLG 9 ESL+NLG Sbjct: 1421 ESLINLG 1427>NP_000876 Length = 1032 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 ESLVNLG 9 ES+VNLG Sbjct: 370 ESIVNLG 376>XP_005271739 Length = 721 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 VRESLVNL 8 VRES VNL Sbjct: 121 VRESYVNL 128>NP_003469 Length = 780 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 VRESLVNL 8 VRES VNL Sbjct: 180 VRESYVNL 187>NP_000760 Length = 490 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 VRESLVNLG 9 V+E+L++LG Sbjct: 83 VKEALIDLG 91>NP_000454 Length = 533 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VRESLVNLG 9 V+ES V+LG Sbjct: 88 VKESFVSLG 96>NP_000762 Length = 490 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 VRESLVNLG 9 V+E+L++LG Sbjct: 83 VKEALIDLG 91>XP_006717707 Length = 277 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 VRESLVNLG 9 V+E+L++LG Sbjct: 83 VKEALIDLG 91>NP_055141 Length = 370 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 RESLVNL 8 RES+VNL Sbjct: 297 RESVVNL 303>NP_005480 Length = 703 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VRESLVNLG 9 +R+SL +LG Sbjct: 85 IRDSLTSLG 93>NP_001239263 Length = 792 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VRESLVNLG 9 +R+SL +LG Sbjct: 174 IRDSLTSLG 182>NP_001136005 Length = 702 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VRESLVNLG 9 +R+SL +LG Sbjct: 84 IRDSLTSLG 92>NP_733745 Length = 860 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VRESLVNLG 9 +R+SL +LG Sbjct: 242 IRDSLTSLG 250>NP_001136006 Length = 700 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VRESLVNLG 9 +R+SL +LG Sbjct: 82 IRDSLTSLG 90>NP_055073 Length = 1530 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VRESLVNLG 9 ++ESL+N G Sbjct: 824 LKESLINSG 832>XP_006723744 Length = 847 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VRESLVNLG 9 ++ESL+N G Sbjct: 824 LKESLINSG 832>XP_005260304 Length = 1530 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VRESLVNLG 9 ++ESL+N G Sbjct: 824 LKESLINSG 832>XP_005254325 Length = 373 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 RESLVNL 8 RES+VNL Sbjct: 300 RESVVNL 306>XP_006720513 Length = 375 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 RESLVNL 8 RES+VNL Sbjct: 300 RESVVNL 306>XP_006720512 Length = 392 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 RESLVNL 8 RES+VNL Sbjct: 300 RESVVNL 306>XP_005251694 Length = 822 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VRESLVNLG 9 +R+SL +LG Sbjct: 204 IRDSLTSLG 212>NP_000161 Length = 1020 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VRESLVNL 8 VRESLV + Sbjct: 336 VRESLVRM 343>NP_001340 Length = 501 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RESLVNLG 9 RE+L+N G Sbjct: 207 RETLINKG 214>NP_002363 Length = 1144 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 VRESLVNL 8 +R+S++NL Sbjct: 72 IRDSVINL 79>NP_006112 Length = 644 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 SLVNLG 9 SLVNLG Sbjct: 66 SLVNLG 71>XP_006714679 Length = 662 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 VRESLVNL 8 +R+S++NL Sbjct: 72 IRDSVINL 79>XP_005248188 Length = 802 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RESLVNLG 9 +ESL NLG Sbjct: 6 KESLGNLG 13>XP_005264214 Length = 124 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VRESLVN 7 +RESL+N Sbjct: 39 IRESLMN 45>NP_689729 Length = 190 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VRESLVN 7 +RESL+N Sbjct: 105 IRESLMN 111Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.315 0.138 0.349 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 408,260 Number of extensions: 890 Number of successful extensions: 46 Number of sequences better than 10000.0: 46 Number of HSP's gapped: 46 Number of HSP's successfully gapped: 46 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |