Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000258 20 390 NP_001035957 20 390 XP_006721990 20 390 XP_006721989 20 390 XP_005258041 20 390 XP_006721988 20 390 XP_006721987 20 390 XP_006721986 20 390 XP_005258040 20 390 XP_006721985 20 390 XP_005255877 18 1935 XP_005255876 18 1935 XP_005255874 18 1935 XP_006721218 18 1935 XP_005255872 18 1935 NP_710155 18 1935 NP_003406 17 4312 NP_001159354 17 4312 NP_001159353 17 4312 NP_008893 17 4312 NP_001171570 17 4312 NP_001007089 17 4312 NP_001274278 16 5631 NP_001275521 16 5631 NP_061121 16 5631 NP_001275519 16 5631 XP_005265380 16 5631 NP_006729 16 7355 NP_001257475 16 7355 NP_009131 16 7355 NP_775929 16 7355 XP_005254913 16 7355 XP_005254912 16 7355 XP_005254911 16 7355 XP_005254910 16 7355 XP_005254909 16 7355 XP_005254908 16 7355 XP_005254907 16 7355 XP_005254906 16 7355 XP_005254905 16 7355 XP_005254904 16 7355 XP_005254903 16 7355 XP_005254902 16 7355 XP_005254901 16 7355 XP_005254900 16 7355 XP_005254899 16 7355 XP_005254898 16 7355 XP_005254897 16 7355 XP_006720441 16 7355 XP_006720440 16 7355 XP_006720439 16 7355 XP_005254896 16 7355 XP_005265147 16 7355 XP_006713180 16 7355 NP_001071092 15 9605 XP_003960549 15 9605 XP_005259833 15 9605 XP_005259832 15 9605 XP_005259830 15 9605 XP_005259829 15 9605 NP_001005276 15 9605>NP_000258 Length = 2818 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 VQSIIHMRT 9 VQSIIH+RT Sbjct: 1800 VQSIIHIRT 1808>NP_001035957 Length = 2839 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 VQSIIHMRT 9 VQSIIH+RT Sbjct: 1821 VQSIIHIRT 1829>XP_006721990 Length = 2823 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 VQSIIHMRT 9 VQSIIH+RT Sbjct: 1831 VQSIIHIRT 1839>XP_006721989 Length = 2823 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 VQSIIHMRT 9 VQSIIH+RT Sbjct: 1831 VQSIIHIRT 1839>XP_005258041 Length = 2836 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 VQSIIHMRT 9 VQSIIH+RT Sbjct: 1800 VQSIIHIRT 1808>XP_006721988 Length = 2846 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 VQSIIHMRT 9 VQSIIH+RT Sbjct: 1810 VQSIIHIRT 1818>XP_006721987 Length = 2849 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 VQSIIHMRT 9 VQSIIH+RT Sbjct: 1831 VQSIIHIRT 1839>XP_006721986 Length = 2854 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 VQSIIHMRT 9 VQSIIH+RT Sbjct: 1818 VQSIIHIRT 1826>XP_005258040 Length = 2857 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 VQSIIHMRT 9 VQSIIH+RT Sbjct: 1821 VQSIIHIRT 1829>XP_006721985 Length = 2867 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 VQSIIHMRT 9 VQSIIH+RT Sbjct: 1831 VQSIIHIRT 1839>XP_005255877 Length = 352 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 QSIIHMRT 9 Q IIHMRT Sbjct: 283 QLIIHMRT 290>XP_005255876 Length = 352 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 QSIIHMRT 9 Q IIHMRT Sbjct: 283 QLIIHMRT 290>XP_005255874 Length = 407 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 QSIIHMRT 9 Q IIHMRT Sbjct: 338 QLIIHMRT 345>XP_006721218 Length = 407 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 QSIIHMRT 9 Q IIHMRT Sbjct: 338 QLIIHMRT 345>XP_005255872 Length = 430 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 QSIIHMRT 9 Q IIHMRT Sbjct: 361 QLIIHMRT 368>NP_710155 Length = 407 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 QSIIHMRT 9 Q IIHMRT Sbjct: 338 QLIIHMRT 345>NP_003406 Length = 947 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 IIHMRT 9 IIHMRT Sbjct: 712 IIHMRT 717Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 IIHMRT 9 IIHMRT Sbjct: 796 IIHMRT 801>NP_001159354 Length = 864 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 IIHMRT 9 IIHMRT Sbjct: 629 IIHMRT 634Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 IIHMRT 9 IIHMRT Sbjct: 713 IIHMRT 718>NP_001159353 Length = 947 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 IIHMRT 9 IIHMRT Sbjct: 712 IIHMRT 717Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 IIHMRT 9 IIHMRT Sbjct: 796 IIHMRT 801>NP_008893 Length = 639 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 QSIIHMRT 9 Q IIH+RT Sbjct: 276 QLIIHLRT 283>NP_001171570 Length = 639 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 QSIIHMRT 9 Q IIH+RT Sbjct: 276 QLIIHLRT 283>NP_001007089 Length = 620 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 QSIIHMRT 9 Q IIH+RT Sbjct: 257 QLIIHLRT 264>NP_001274278 Length = 530 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 QSIIHMRT 9 Q I+H+RT Sbjct: 201 QLIVHLRT 208>NP_001275521 Length = 373 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 QSIIHMRT 9 Q I+H+RT Sbjct: 274 QLIVHLRT 281>NP_061121 Length = 754 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 QSIIHMRT 9 Q I+H+RT Sbjct: 425 QLIVHLRT 432>NP_001275519 Length = 754 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 QSIIHMRT 9 Q I+H+RT Sbjct: 425 QLIVHLRT 432>XP_005265380 Length = 753 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 QSIIHMRT 9 Q I+H+RT Sbjct: 424 QLIVHLRT 431>NP_006729 Length = 2817 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 VQSIIHM 7 VQS++H+ Sbjct: 2526 VQSVVHL 2532>NP_001257475 Length = 1434 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 VQSIIHM 7 VQS++H+ Sbjct: 1143 VQSVVHL 1149>NP_009131 Length = 2813 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 VQSIIHM 7 VQS++H+ Sbjct: 2522 VQSVVHL 2528>NP_775929 Length = 331 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 QSIIHMRT 9 Q I+H+RT Sbjct: 288 QVILHLRT 295>XP_005254913 Length = 1441 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 VQSIIHM 7 VQS++H+ Sbjct: 1150 VQSVVHL 1156>XP_005254912 Length = 1442 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 VQSIIHM 7 VQS++H+ Sbjct: 1151 VQSVVHL 1157>XP_005254911 Length = 1473 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 VQSIIHM 7 VQS++H+ Sbjct: 1182 VQSVVHL 1188>XP_005254910 Length = 1523 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 VQSIIHM 7 VQS++H+ Sbjct: 1232 VQSVVHL 1238>XP_005254909 Length = 1536 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 VQSIIHM 7 VQS++H+ Sbjct: 1245 VQSVVHL 1251>XP_005254908 Length = 1536 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 VQSIIHM 7 VQS++H+ Sbjct: 1245 VQSVVHL 1251>XP_005254907 Length = 2590 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 VQSIIHM 7 VQS++H+ Sbjct: 2299 VQSVVHL 2305>XP_005254906 Length = 2675 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 VQSIIHM 7 VQS++H+ Sbjct: 2384 VQSVVHL 2390>XP_005254905 Length = 2793 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 VQSIIHM 7 VQS++H+ Sbjct: 2502 VQSVVHL 2508>XP_005254904 Length = 2802 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 VQSIIHM 7 VQS++H+ Sbjct: 2511 VQSVVHL 2517>XP_005254903 Length = 2820 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 VQSIIHM 7 VQS++H+ Sbjct: 2529 VQSVVHL 2535>XP_005254902 Length = 2835 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 VQSIIHM 7 VQS++H+ Sbjct: 2544 VQSVVHL 2550>XP_005254901 Length = 2842 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 VQSIIHM 7 VQS++H+ Sbjct: 2551 VQSVVHL 2557>XP_005254900 Length = 2843 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 VQSIIHM 7 VQS++H+ Sbjct: 2552 VQSVVHL 2558>XP_005254899 Length = 2861 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 VQSIIHM 7 VQS++H+ Sbjct: 2570 VQSVVHL 2576>XP_005254898 Length = 2874 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 VQSIIHM 7 VQS++H+ Sbjct: 2583 VQSVVHL 2589>XP_005254897 Length = 2876 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 VQSIIHM 7 VQS++H+ Sbjct: 2585 VQSVVHL 2591>XP_006720441 Length = 2881 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 VQSIIHM 7 VQS++H+ Sbjct: 2590 VQSVVHL 2596>XP_006720440 Length = 2882 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 VQSIIHM 7 VQS++H+ Sbjct: 2591 VQSVVHL 2597>XP_006720439 Length = 2882 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 VQSIIHM 7 VQS++H+ Sbjct: 2591 VQSVVHL 2597>XP_005254896 Length = 2883 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 VQSIIHM 7 VQS++H+ Sbjct: 2592 VQSVVHL 2598>XP_005265147 Length = 331 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 QSIIHMRT 9 Q I+H+RT Sbjct: 288 QVILHLRT 295>XP_006713180 Length = 331 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 QSIIHMRT 9 Q I+H+RT Sbjct: 288 QVILHLRT 295>NP_001071092 Length = 533 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 IIHMRT 9 ++HMRT Sbjct: 382 VLHMRT 387>XP_003960549 Length = 248 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 VQSIIHM 7 VQS++H+ Sbjct: 238 VQSVLHL 244>XP_005259833 Length = 404 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 IIHMRT 9 ++HMRT Sbjct: 253 VLHMRT 258>XP_005259832 Length = 532 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 IIHMRT 9 ++HMRT Sbjct: 381 VLHMRT 386>XP_005259830 Length = 532 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 IIHMRT 9 ++HMRT Sbjct: 381 VLHMRT 386>XP_005259829 Length = 533 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 IIHMRT 9 ++HMRT Sbjct: 382 VLHMRT 387>NP_001005276 Length = 323 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VQSIIHMRT 9 +QS+I MR+ Sbjct: 221 LQSVIQMRS 229Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.337 0.134 0.361 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 439,924 Number of extensions: 539 Number of successful extensions: 64 Number of sequences better than 10000.0: 61 Number of HSP's gapped: 64 Number of HSP's successfully gapped: 64 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.5 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |