Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_733751 20 390 XP_006716142 20 390 XP_005250088 20 390 XP_006716141 20 390 XP_005250085 20 390 XP_006716140 20 390 XP_005250084 20 390 XP_005250083 20 390 XP_005250082 20 390 NP_000485 19 869 NP_003473 17 2528 XP_006719679 17 2528 XP_005269219 17 2528 XP_006719678 17 2528 XP_006719677 17 2528 NP_001033722 17 4312 NP_001229838 17 4312 NP_001229839 17 4312 NP_001229837 17 4312 XP_006710646 17 4312 NP_060871 16 5631 NP_775846 16 5631 NP_001230925 16 5631 NP_001027 16 5631 NP_001167574 16 5631 NP_660215 16 5631 XP_006717844 16 5631 XP_006713956 16 5631 NP_001159751 16 7355 NP_055686 16 7355 NP_001120932 16 7355 NP_001107859 16 7355 NP_872412 16 7355 XP_006714269 16 7355 NP_001804 15 9605 NP_000042 15 9605 NP_001273663 15 9605 NP_004392 15 9605 NP_998731 15 9605 XP_005276293 15 9605 XP_006723106 15 9605 XP_006723105 15 9605 XP_006718908 15 9605 XP_005271621 15 9605 XP_006718907 15 9605 XP_006718906 15 9605 XP_005271619 15 9605 XP_005271618 15 9605 XP_005276006 15 9605 NP_604393 15 9605 NP_786924 15 9605>NP_733751 Length = 4911 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 VQRDDVRQI 9 VQRD+VRQI Sbjct: 4527 VQRDEVRQI 4535>XP_006716142 Length = 4927 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 VQRDDVRQI 9 VQRD+VRQI Sbjct: 4543 VQRDEVRQI 4551>XP_005250088 Length = 4928 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 VQRDDVRQI 9 VQRD+VRQI Sbjct: 4544 VQRDEVRQI 4552>XP_006716141 Length = 4959 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 VQRDDVRQI 9 VQRD+VRQI Sbjct: 4575 VQRDEVRQI 4583>XP_005250085 Length = 4979 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 VQRDDVRQI 9 VQRD+VRQI Sbjct: 4599 VQRDEVRQI 4607>XP_006716140 Length = 4982 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 VQRDDVRQI 9 VQRD+VRQI Sbjct: 4598 VQRDEVRQI 4606>XP_005250084 Length = 4982 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 VQRDDVRQI 9 VQRD+VRQI Sbjct: 4598 VQRDEVRQI 4606>XP_005250083 Length = 4982 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 VQRDDVRQI 9 VQRD+VRQI Sbjct: 4598 VQRDEVRQI 4606>XP_005250082 Length = 4983 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 VQRDDVRQI 9 VQRD+VRQI Sbjct: 4599 VQRDEVRQI 4607>NP_000485 Length = 1497 Score = 18.9 bits (37), Expect = 869 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 VQRDDVRQ 8 +QRDDVRQ Sbjct: 1091 LQRDDVRQ 1098>NP_003473 Length = 5537 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 VQRDDVRQI 9 ++RD+V+QI Sbjct: 5157 IERDEVKQI 5165>XP_006719679 Length = 5536 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 VQRDDVRQI 9 ++RD+V+QI Sbjct: 5156 IERDEVKQI 5164>XP_005269219 Length = 5537 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 VQRDDVRQI 9 ++RD+V+QI Sbjct: 5157 IERDEVKQI 5165>XP_006719678 Length = 5539 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 VQRDDVRQI 9 ++RD+V+QI Sbjct: 5159 IERDEVKQI 5167>XP_006719677 Length = 5540 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 VQRDDVRQI 9 ++RD+V+QI Sbjct: 5160 IERDEVKQI 5168>NP_001033722 Length = 263 Score = 16.5 bits (31), Expect = 4312 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 VQRDDVRQI 9 ++R+D+RQ+ Sbjct: 64 LERNDIRQV 72>NP_001229838 Length = 236 Score = 16.5 bits (31), Expect = 4312 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 VQRDDVRQI 9 ++R+D+RQ+ Sbjct: 37 LERNDIRQV 45>NP_001229839 Length = 200 Score = 16.5 bits (31), Expect = 4312 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 VQRDDVRQI 9 ++R+D+RQ+ Sbjct: 64 LERNDIRQV 72>NP_001229837 Length = 263 Score = 16.5 bits (31), Expect = 4312 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 VQRDDVRQI 9 ++R+D+RQ+ Sbjct: 64 LERNDIRQV 72>XP_006710646 Length = 263 Score = 16.5 bits (31), Expect = 4312 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 VQRDDVRQI 9 ++R+D+RQ+ Sbjct: 64 LERNDIRQV 72>NP_060871 Length = 414 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 VQRDDVRQI 9 ++RD+VR + Sbjct: 60 IERDEVRNV 68>NP_775846 Length = 486 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 VQRDDVRQI 9 ++RD+VR + Sbjct: 130 IERDEVRNV 138>NP_001230925 Length = 4865 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 DDVRQI 9 DDVRQI Sbjct: 1741 DDVRQI 1746>NP_001027 Length = 4870 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 DDVRQI 9 DDVRQI Sbjct: 1741 DDVRQI 1746>NP_001167574 Length = 410 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VQRDDVRQ 8 +QRD VRQ Sbjct: 144 LQRDTVRQ 151>NP_660215 Length = 468 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VQRDDVRQ 8 VQR D+RQ Sbjct: 309 VQRGDLRQ 316>XP_006717844 Length = 442 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 VQRDDVRQI 9 ++RD+VR + Sbjct: 130 IERDEVRNV 138>XP_006713956 Length = 367 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 VQRDDVRQI 9 ++RD+VR + Sbjct: 13 IERDEVRNV 21>NP_001159751 Length = 1201 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 DDVRQI 9 DD+RQI Sbjct: 117 DDIRQI 122>NP_055686 Length = 1198 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 DDVRQI 9 DD+RQI Sbjct: 117 DDIRQI 122>NP_001120932 Length = 1202 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 DDVRQI 9 DD+RQI Sbjct: 117 DDIRQI 122>NP_001107859 Length = 418 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 DDVRQI 9 DD+RQI Sbjct: 286 DDIRQI 291>NP_872412 Length = 421 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 DDVRQI 9 DD+RQI Sbjct: 289 DDIRQI 294>XP_006714269 Length = 387 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 DDVRQI 9 DD+RQI Sbjct: 255 DDIRQI 260>NP_001804 Length = 2701 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 QRDDVRQI 9 +RDD+R + Sbjct: 1687 ERDDLRSV 1694>NP_000042 Length = 3056 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 RDDVRQ 8 RDD+RQ Sbjct: 2719 RDDLRQ 2724>NP_001273663 Length = 2580 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 QRDDVRQI 9 +RDD+R + Sbjct: 1662 ERDDLRSV 1669>NP_004392 Length = 331 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 QRDDVRQ 8 QR++VRQ Sbjct: 181 QREEVRQ 187>NP_998731 Length = 268 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 QRDDVRQ 8 QR++VRQ Sbjct: 181 QREEVRQ 187>XP_005276293 Length = 695 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VQRDDVRQI 9 +QRD RQI Sbjct: 444 IQRDLCRQI 452>XP_006723106 Length = 971 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 VQRDDVRQI 9 + RDD+R + Sbjct: 740 LSRDDIRSL 748>XP_006723105 Length = 1028 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 VQRDDVRQI 9 + RDD+R + Sbjct: 740 LSRDDIRSL 748>XP_006718908 Length = 1708 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 RDDVRQ 8 RDD+RQ Sbjct: 1371 RDDLRQ 1376>XP_005271621 Length = 2708 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 RDDVRQ 8 RDD+RQ Sbjct: 2371 RDDLRQ 2376>XP_006718907 Length = 3050 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 RDDVRQ 8 RDD+RQ Sbjct: 2713 RDDLRQ 2718>XP_006718906 Length = 3056 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 RDDVRQ 8 RDD+RQ Sbjct: 2719 RDDLRQ 2724>XP_005271619 Length = 3056 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 RDDVRQ 8 RDD+RQ Sbjct: 2719 RDDLRQ 2724>XP_005271618 Length = 3056 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 RDDVRQ 8 RDD+RQ Sbjct: 2719 RDDLRQ 2724>XP_005276006 Length = 695 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VQRDDVRQI 9 +QRD RQI Sbjct: 444 IQRDLCRQI 452>NP_604393 Length = 994 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 VQRDDVRQI 9 + RDD+R + Sbjct: 706 LSRDDIRSL 714>NP_786924 Length = 425 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 RDDVRQI 9 +DDVR++ Sbjct: 245 KDDVREV 251Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.329 0.144 0.379 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 525,708 Number of extensions: 821 Number of successful extensions: 51 Number of sequences better than 10000.0: 51 Number of HSP's gapped: 51 Number of HSP's successfully gapped: 51 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.1 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |