Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000242 18 1135 XP_005264389 18 1135 NP_002514 17 2528 NP_598400 17 4312 XP_006715512 17 4312 XP_006715511 17 4312 XP_006715508 17 4312 XP_006715507 17 4312 NP_001116698 17 4312 NP_036255 17 4312 NP_004703 16 5631 NP_001077086 16 5631 NP_055596 16 5631 XP_005257851 16 5631 XP_006716556 16 5631 XP_006716555 16 5631 XP_006716554 16 5631 NP_001002264 16 7355 NP_150280 16 7355 NP_079504 16 7355 NP_060139 16 7355 NP_004220 16 7355 NP_001008392 16 7355 XP_005272758 16 7355 XP_005272757 16 7355 XP_005272756 16 7355 XP_006719959 16 7355 XP_005266654 16 7355 XP_005266653 16 7355 XP_005273337 16 7355 XP_005273336 16 7355 NP_002461 15 9605 NP_001154976 15 9605 NP_733844 15 9605 NP_003739 15 9605 XP_006721591 15 9605 XP_006719509 15 9605 XP_006710587 15 9605 NP_002513 15 9605>NP_000242 Length = 934 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VQQKETLQL 9 VQ KETLQL Sbjct: 3 VQPKETLQL 11>XP_005264389 Length = 921 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VQQKETLQL 9 VQ KETLQL Sbjct: 3 VQPKETLQL 11>NP_002514 Length = 431 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 VQQKETL 7 VQQKETL Sbjct: 71 VQQKETL 77>NP_598400 Length = 717 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 VQQKETLQL 9 VQQ E LQL Sbjct: 627 VQQDEALQL 635>XP_006715512 Length = 354 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 VQQKETLQL 9 VQQ E LQL Sbjct: 264 VQQDEALQL 272>XP_006715511 Length = 354 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 VQQKETLQL 9 VQQ E LQL Sbjct: 264 VQQDEALQL 272>XP_006715508 Length = 618 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 VQQKETLQL 9 VQQ E LQL Sbjct: 528 VQQDEALQL 536>XP_006715507 Length = 618 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 VQQKETLQL 9 VQQ E LQL Sbjct: 528 VQQDEALQL 536>NP_001116698 Length = 732 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 VQQKETLQL 9 VQQ E LQL Sbjct: 642 VQQDEALQL 650>NP_036255 Length = 692 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 VQQKETLQL 9 VQQ E LQL Sbjct: 602 VQQDEALQL 610>NP_004703 Length = 777 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QQKETLQL 9 QQK+T+Q+ Sbjct: 549 QQKQTVQM 556>NP_001077086 Length = 1591 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 QQKETLQ 8 QQKETL+ Sbjct: 1084 QQKETLK 1090>NP_055596 Length = 1594 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 QQKETLQ 8 QQKETL+ Sbjct: 1084 QQKETLK 1090>XP_005257851 Length = 768 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QQKETLQL 9 QQK+T+Q+ Sbjct: 540 QQKQTVQM 547>XP_006716556 Length = 1048 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 QQKETLQ 8 QQKETL+ Sbjct: 541 QQKETLK 547>XP_006716555 Length = 1539 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 QQKETLQ 8 QQKETL+ Sbjct: 1032 QQKETLK 1038>XP_006716554 Length = 1591 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 QQKETLQ 8 QQKETL+ Sbjct: 1084 QQKETLK 1090>NP_001002264 Length = 410 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VQQKETLQL 9 V+QK+ LQL Sbjct: 119 VRQKQQLQL 127>NP_150280 Length = 307 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VQQKETLQL 9 V+QK+ LQL Sbjct: 119 VRQKQQLQL 127>NP_079504 Length = 551 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 QKETLQL 9 QK+TLQL Sbjct: 471 QKKTLQL 477>NP_060139 Length = 1250 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 QKETLQ 8 QKETLQ Sbjct: 844 QKETLQ 849>NP_004220 Length = 1454 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 QKETLQL 9 Q+ETLQL Sbjct: 1225 QQETLQL 1231>NP_001008392 Length = 1079 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 QKETLQ 8 QKETLQ Sbjct: 68 QKETLQ 73>XP_005272758 Length = 1338 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 QKETLQL 9 Q+ETLQL Sbjct: 1109 QQETLQL 1115>XP_005272757 Length = 1410 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 QKETLQL 9 Q+ETLQL Sbjct: 1181 QQETLQL 1187>XP_005272756 Length = 1443 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 QKETLQL 9 Q+ETLQL Sbjct: 1225 QQETLQL 1231>XP_006719959 Length = 309 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VQQKETLQL 9 V+QK+ LQL Sbjct: 119 VRQKQQLQL 127>XP_005266654 Length = 318 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VQQKETLQL 9 V+QK+ LQL Sbjct: 119 VRQKQQLQL 127>XP_005266653 Length = 399 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VQQKETLQL 9 V+QK+ LQL Sbjct: 119 VRQKQQLQL 127>XP_005273337 Length = 287 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 QKETLQL 9 QK+TLQL Sbjct: 207 QKKTLQL 213>XP_005273336 Length = 287 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 QKETLQL 9 QK+TLQL Sbjct: 207 QKKTLQL 213>NP_002461 Length = 1940 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VQQKETLQL 9 VQ+K LQL Sbjct: 882 VQEKNDLQL 890>NP_001154976 Length = 503 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 KETLQL 9 KETLQL Sbjct: 404 KETLQL 409>NP_733844 Length = 563 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 KETLQL 9 KETLQL Sbjct: 464 KETLQL 469>NP_003739 Length = 563 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 KETLQL 9 KETLQL Sbjct: 464 KETLQL 469>XP_006721591 Length = 1940 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VQQKETLQL 9 VQ+K LQL Sbjct: 882 VQEKNDLQL 890>XP_006719509 Length = 871 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VQQKETLQL 9 ++QKETL + Sbjct: 851 LEQKETLNV 859>XP_006710587 Length = 7645 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VQQKETLQ 8 +QQ ETLQ Sbjct: 3688 LQQYETLQ 3695>NP_002513 Length = 432 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VQQKETL 7 +QQKET+ Sbjct: 66 LQQKETI 72Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.307 0.121 0.274 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 544,625 Number of extensions: 1150 Number of successful extensions: 39 Number of sequences better than 10000.0: 39 Number of HSP's gapped: 39 Number of HSP's successfully gapped: 39 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.4 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |