Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_008835 19 665 NP_001075109 19 665 NP_001171482 17 4312 NP_001171481 17 4312 NP_003495 17 4312 XP_005261342 17 4312 XP_005261343 17 4312 NP_997364 16 7355 NP_060608 16 7355 XP_006712554 16 7355 XP_005263717 16 7355 XP_005263716 16 7355 XP_006712553 16 7355 NP_001127887 16 7355 NP_997246 16 7355 NP_055196 15 9605 NP_001035197 15 9605 NP_443099 15 9605 NP_570899 15 9605 NP_001273280 15 9605 NP_999627 15 9605 NP_001034230 15 9605 NP_005059 15 9605 NP_071766 15 9605 XP_005267591 15 9605 XP_005267590 15 9605 XP_005267589 15 9605 XP_005267588 15 9605 XP_006720179 15 9605 XP_006720008 15 9605 XP_006720007 15 9605 XP_006720006 15 9605 XP_006718835 15 9605 XP_005273858 15 9605 XP_005273857 15 9605 XP_006718834 15 9605 XP_005273855 15 9605 XP_005267157 15 9605 XP_006711548 15 9605>NP_008835 Length = 4128 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 QIRATQQQ 9 QIRATQQQ Sbjct: 2634 QIRATQQQ 2641>NP_001075109 Length = 4097 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 QIRATQQQ 9 QIRATQQQ Sbjct: 2634 QIRATQQQ 2641>NP_001171482 Length = 520 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 QIRATQQ 8 Q+RATQQ Sbjct: 376 QLRATQQ 382>NP_001171481 Length = 598 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 QIRATQQ 8 Q+RATQQ Sbjct: 454 QLRATQQ 460>NP_003495 Length = 566 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 QIRATQQ 8 Q+RATQQ Sbjct: 422 QLRATQQ 428>XP_005261342 Length = 598 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 QIRATQQ 8 Q+RATQQ Sbjct: 454 QLRATQQ 460>XP_005261343 Length = 567 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 QIRATQQ 8 Q+RATQQ Sbjct: 422 QLRATQQ 428>NP_997364 Length = 590 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VQIRATQQQ 9 +Q+R+ QQQ Sbjct: 103 IQMRSLQQQ 111>NP_060608 Length = 557 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VQIRATQ 7 VQIRAT+ Sbjct: 40 VQIRATE 46>XP_006712554 Length = 1885 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VQIRATQQQ 9 +Q+R+ QQQ Sbjct: 35 IQMRSLQQQ 43>XP_005263717 Length = 1953 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VQIRATQQQ 9 +Q+R+ QQQ Sbjct: 103 IQMRSLQQQ 111>XP_005263716 Length = 1953 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VQIRATQQQ 9 +Q+R+ QQQ Sbjct: 103 IQMRSLQQQ 111>XP_006712553 Length = 1953 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VQIRATQQQ 9 +Q+R+ QQQ Sbjct: 103 IQMRSLQQQ 111>NP_001127887 Length = 557 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VQIRATQ 7 VQIRAT+ Sbjct: 40 VQIRATE 46>NP_997246 Length = 1909 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VQIRATQQQ 9 +Q+R+ QQQ Sbjct: 103 IQMRSLQQQ 111>NP_055196 Length = 1429 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VQIRATQQQ 9 V IRA++QQ Sbjct: 986 VLIRASEQQ 994>NP_001035197 Length = 1453 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VQIRATQQQ 9 V IRA++QQ Sbjct: 986 VLIRASEQQ 994>NP_443099 Length = 1738 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 QIRATQQQ 9 +IRA QQQ Sbjct: 1582 RIRAKQQQ 1589>NP_570899 Length = 956 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 QIRATQQQ 9 Q+R+TQ Q Sbjct: 175 QVRSTQPQ 182>NP_001273280 Length = 280 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 IRATQQQ 9 +RATQQ+ Sbjct: 35 LRATQQE 41>NP_999627 Length = 774 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 IRATQQQ 9 +RATQQ+ Sbjct: 35 LRATQQE 41>NP_001034230 Length = 2365 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 IRATQQ 8 IRATQQ Sbjct: 807 IRATQQ 812>NP_005059 Length = 766 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 IRATQQ 8 IRATQQ Sbjct: 568 IRATQQ 573>NP_071766 Length = 397 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 QIRATQQ 8 QIR TQQ Sbjct: 219 QIRETQQ 225>XP_005267591 Length = 1275 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VQIRATQQQ 9 V IRA++QQ Sbjct: 986 VLIRASEQQ 994>XP_005267590 Length = 1394 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VQIRATQQQ 9 V IRA++QQ Sbjct: 986 VLIRASEQQ 994>XP_005267589 Length = 1418 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VQIRATQQQ 9 V IRA++QQ Sbjct: 986 VLIRASEQQ 994>XP_005267588 Length = 1453 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VQIRATQQQ 9 V IRA++QQ Sbjct: 986 VLIRASEQQ 994>XP_006720179 Length = 1453 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VQIRATQQQ 9 V IRA++QQ Sbjct: 986 VLIRASEQQ 994>XP_006720008 Length = 1645 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 QIRATQQQ 9 +IRA QQQ Sbjct: 1489 RIRAKQQQ 1496>XP_006720007 Length = 1709 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 QIRATQQQ 9 +IRA QQQ Sbjct: 1553 RIRAKQQQ 1560>XP_006720006 Length = 1713 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 QIRATQQQ 9 +IRA QQQ Sbjct: 1557 RIRAKQQQ 1564>XP_006718835 Length = 677 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 QIRATQQQ 9 Q+R+TQ Q Sbjct: 204 QVRSTQPQ 211>XP_005273858 Length = 870 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 QIRATQQQ 9 Q+R+TQ Q Sbjct: 89 QVRSTQPQ 96>XP_005273857 Length = 906 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 QIRATQQQ 9 Q+R+TQ Q Sbjct: 125 QVRSTQPQ 132>XP_006718834 Length = 978 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 QIRATQQQ 9 Q+R+TQ Q Sbjct: 197 QVRSTQPQ 204>XP_005273855 Length = 985 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 QIRATQQQ 9 Q+R+TQ Q Sbjct: 204 QVRSTQPQ 211>XP_005267157 Length = 766 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 IRATQQ 8 IRATQQ Sbjct: 568 IRATQQ 573>XP_006711548 Length = 181 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 QIRATQQ 8 QIR TQQ Sbjct: 3 QIRETQQ 9Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.319 0.118 0.275 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 324,349 Number of extensions: 671 Number of successful extensions: 39 Number of sequences better than 10000.0: 39 Number of HSP's gapped: 39 Number of HSP's successfully gapped: 39 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.0 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |