Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001243398 20 299 NP_036462 20 299 NP_001243397 20 299 XP_005269721 20 299 NP_001092882 18 1935 NP_006757 18 1935 NP_001092883 18 1935 XP_005273706 18 1935 NP_004320 17 2528 NP_001137378 17 4312 NP_006691 17 4312 NP_078945 17 4312 NP_036533 16 5631 XP_005261968 16 5631 XP_005261966 16 5631 XP_005261967 16 5631 XP_006724476 16 5631 XP_005261965 16 5631 NP_115575 16 7355 NP_055396 16 7355 NP_001275916 16 7355 NP_001074012 16 7355 NP_116130 16 7355 NP_067054 16 7355 NP_006402 16 7355 XP_005275562 16 7355 XP_005275561 16 7355 XP_005275395 16 7355 XP_005275394 16 7355 XP_005275261 16 7355 XP_005275260 16 7355 XP_005275131 16 7355 XP_005275130 16 7355 XP_005272819 16 7355 XP_005272818 16 7355 XP_005274887 16 7355 XP_005274886 16 7355 XP_006717149 16 7355 XP_005248863 16 7355 XP_005248862 16 7355 NP_055730 15 9605 NP_001277007 15 9605 NP_000450 15 9605 NP_001242982 15 9605 NP_001277006 15 9605 NP_001073867 15 9605 NP_817089 15 9605 NP_068582 15 9605 NP_001012746 15 9605 NP_076991 15 9605 XP_006723910 15 9605 XP_006723909 15 9605 XP_005256858 15 9605 XP_006717494 15 9605 XP_006717493 15 9605 XP_006717492 15 9605 XP_006717491 15 9605 XP_006717490 15 9605 XP_006717489 15 9605 XP_006717488 15 9605 XP_006717487 15 9605 XP_006717486 15 9605 XP_005251911 15 9605 XP_005251910 15 9605 XP_005251909 15 9605 XP_005251908 15 9605 XP_005251907 15 9605 XP_005251620 15 9605 XP_005251618 15 9605>NP_001243398 Length = 1781 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VQGRNADTM 9 VQGRNAD M Sbjct: 277 VQGRNADNM 285>NP_036462 Length = 2073 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VQGRNADTM 9 VQGRNAD M Sbjct: 277 VQGRNADNM 285>NP_001243397 Length = 1890 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VQGRNADTM 9 VQGRNAD M Sbjct: 277 VQGRNADNM 285>XP_005269721 Length = 2073 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VQGRNADTM 9 VQGRNAD M Sbjct: 277 VQGRNADNM 285>NP_001092882 Length = 2004 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 QGRNADTM 9 QG+NAD M Sbjct: 271 QGKNADNM 278>NP_006757 Length = 2004 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 QGRNADTM 9 QG+NAD M Sbjct: 271 QGKNADNM 278>NP_001092883 Length = 2004 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 QGRNADTM 9 QG+NAD M Sbjct: 271 QGKNADNM 278>XP_005273706 Length = 1997 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 QGRNADTM 9 QG+NAD M Sbjct: 271 QGKNADNM 278>NP_004320 Length = 532 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VQGRNADTM 9 VQG+N D+M Sbjct: 21 VQGQNLDSM 29>NP_001137378 Length = 582 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VQGRNADT 8 +QGRN D+ Sbjct: 494 IQGRNRDS 501>NP_006691 Length = 582 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VQGRNADT 8 +QGRN D+ Sbjct: 494 IQGRNRDS 501>NP_078945 Length = 614 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VQGRNADTM 9 V GR ADT+ Sbjct: 69 VSGRQADTV 77>NP_036533 Length = 1838 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 QGRNADTM 9 QG+N DT+ Sbjct: 688 QGKNLDTV 695>XP_005261968 Length = 1838 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 QGRNADTM 9 QG+N DT+ Sbjct: 688 QGKNLDTV 695>XP_005261966 Length = 1838 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 QGRNADTM 9 QG+N DT+ Sbjct: 688 QGKNLDTV 695>XP_005261967 Length = 1838 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 QGRNADTM 9 QG+N DT+ Sbjct: 688 QGKNLDTV 695>XP_006724476 Length = 1838 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 QGRNADTM 9 QG+N DT+ Sbjct: 688 QGKNLDTV 695>XP_005261965 Length = 1920 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 QGRNADTM 9 QG+N DT+ Sbjct: 770 QGKNLDTV 777>NP_115575 Length = 1188 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 QGRNAD 7 QGRN+D Sbjct: 84 QGRNSD 89>NP_055396 Length = 170 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 GRNADT 8 GRN+DT Sbjct: 130 GRNSDT 135>NP_001275916 Length = 170 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 GRNADT 8 GRN+DT Sbjct: 130 GRNSDT 135>NP_001074012 Length = 758 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 QGRNAD 7 QG+NAD Sbjct: 356 QGKNAD 361>NP_116130 Length = 283 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VQGRNADTM 9 V+GRN + M Sbjct: 58 VRGRNVENM 66>NP_067054 Length = 758 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 QGRNAD 7 QG+NAD Sbjct: 356 QGKNAD 361>NP_006402 Length = 283 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VQGRNADTM 9 V+GRN + M Sbjct: 58 VRGRNVENM 66>XP_005275562 Length = 283 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VQGRNADTM 9 V+GRN + M Sbjct: 58 VRGRNVENM 66>XP_005275561 Length = 287 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VQGRNADTM 9 V+GRN + M Sbjct: 62 VRGRNVENM 70>XP_005275395 Length = 283 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VQGRNADTM 9 V+GRN + M Sbjct: 58 VRGRNVENM 66>XP_005275394 Length = 287 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VQGRNADTM 9 V+GRN + M Sbjct: 62 VRGRNVENM 70>XP_005275261 Length = 283 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VQGRNADTM 9 V+GRN + M Sbjct: 58 VRGRNVENM 66>XP_005275260 Length = 287 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VQGRNADTM 9 V+GRN + M Sbjct: 62 VRGRNVENM 70>XP_005275131 Length = 283 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VQGRNADTM 9 V+GRN + M Sbjct: 58 VRGRNVENM 66>XP_005275130 Length = 287 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VQGRNADTM 9 V+GRN + M Sbjct: 62 VRGRNVENM 70>XP_005272819 Length = 283 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VQGRNADTM 9 V+GRN + M Sbjct: 58 VRGRNVENM 66>XP_005272818 Length = 287 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VQGRNADTM 9 V+GRN + M Sbjct: 62 VRGRNVENM 70>XP_005274887 Length = 283 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VQGRNADTM 9 V+GRN + M Sbjct: 58 VRGRNVENM 66>XP_005274886 Length = 287 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VQGRNADTM 9 V+GRN + M Sbjct: 62 VRGRNVENM 70>XP_006717149 Length = 137 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 GRNADT 8 GRN+DT Sbjct: 97 GRNSDT 102>XP_005248863 Length = 283 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VQGRNADTM 9 V+GRN + M Sbjct: 58 VRGRNVENM 66>XP_005248862 Length = 287 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VQGRNADTM 9 V+GRN + M Sbjct: 62 VRGRNVENM 70>NP_055730 Length = 1710 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RNADTM 9 RNADT+ Sbjct: 803 RNADTL 808>NP_001277007 Length = 976 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 VQGRNAD 7 VQG+N D Sbjct: 529 VQGKNED 535>NP_000450 Length = 1124 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 VQGRNAD 7 VQG+N D Sbjct: 676 VQGKNED 682>NP_001242982 Length = 1709 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RNADTM 9 RNADT+ Sbjct: 802 RNADTL 807>NP_001277006 Length = 1081 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 VQGRNAD 7 VQG+N D Sbjct: 633 VQGKNED 639>NP_001073867 Length = 2017 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RNADTM 9 RNADT+ Sbjct: 951 RNADTL 956>NP_817089 Length = 832 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VQGRNADTM 9 V+GR A+T+ Sbjct: 755 VEGRMAETL 763>NP_068582 Length = 165 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VQGRNADTM 9 V+GR A+T+ Sbjct: 88 VEGRMAETL 96>NP_001012746 Length = 191 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RNADTM 9 RNADT+ Sbjct: 102 RNADTL 107>NP_076991 Length = 562 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VQGRNADTM 9 V+G+N D M Sbjct: 536 VEGQNRDLM 544>XP_006723910 Length = 124 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VQGRNADTM 9 V+GR A+T+ Sbjct: 47 VEGRMAETL 55>XP_006723909 Length = 346 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VQGRNADTM 9 V+GR A+T+ Sbjct: 269 VEGRMAETL 277>XP_005256858 Length = 344 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VQGRNADTM 9 V+G+N D M Sbjct: 318 VEGQNRDLM 326>XP_006717494 Length = 1571 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RNADTM 9 RNADT+ Sbjct: 664 RNADTL 669>XP_006717493 Length = 1610 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RNADTM 9 RNADT+ Sbjct: 703 RNADTL 708>XP_006717492 Length = 1635 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RNADTM 9 RNADT+ Sbjct: 1165 RNADTL 1170>XP_006717491 Length = 1677 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RNADTM 9 RNADT+ Sbjct: 770 RNADTL 775>XP_006717490 Length = 1791 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RNADTM 9 RNADT+ Sbjct: 884 RNADTL 889>XP_006717489 Length = 1945 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RNADTM 9 RNADT+ Sbjct: 1165 RNADTL 1170>XP_006717488 Length = 2031 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RNADTM 9 RNADT+ Sbjct: 1165 RNADTL 1170>XP_006717487 Length = 2071 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RNADTM 9 RNADT+ Sbjct: 1164 RNADTL 1169>XP_006717486 Length = 2072 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RNADTM 9 RNADT+ Sbjct: 1165 RNADTL 1170>XP_005251911 Length = 1839 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RNADTM 9 RNADT+ Sbjct: 773 RNADTL 778>XP_005251910 Length = 1839 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RNADTM 9 RNADT+ Sbjct: 773 RNADTL 778>XP_005251909 Length = 1839 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RNADTM 9 RNADT+ Sbjct: 773 RNADTL 778>XP_005251908 Length = 1839 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RNADTM 9 RNADT+ Sbjct: 773 RNADTL 778>XP_005251907 Length = 1845 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RNADTM 9 RNADT+ Sbjct: 779 RNADTL 784>XP_005251620 Length = 1080 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 VQGRNAD 7 VQG+N D Sbjct: 633 VQGKNED 639>XP_005251618 Length = 1123 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 VQGRNAD 7 VQG+N D Sbjct: 676 VQGKNED 682Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.313 0.124 0.337 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 608,947 Number of extensions: 885 Number of successful extensions: 69 Number of sequences better than 10000.0: 69 Number of HSP's gapped: 69 Number of HSP's successfully gapped: 69 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.7 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |