Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_056046 17 2528 XP_006718233 17 2528 XP_005272458 17 2528 XP_006716327 17 2528 NP_699163 17 2528 NP_115272 17 4312 NP_061750 17 4312 NP_004477 17 4312 XP_005251989 17 4312 XP_005251988 17 4312 XP_005251987 17 4312 NP_037386 16 5631 NP_116207 16 5631 XP_005268867 16 5631 XP_005268866 16 5631 NP_001257903 16 7355 NP_996766 16 7355 NP_945350 16 7355 NP_001161434 16 7355 NP_996767 16 7355 NP_056127 16 7355 NP_057340 16 7355 XP_006721269 16 7355 XP_006716039 16 7355 XP_006716038 16 7355 XP_006714407 16 7355 XP_006714405 16 7355 XP_005263349 16 7355 XP_005263348 16 7355 XP_005263347 16 7355 XP_005263346 16 7355 XP_005263345 16 7355 XP_005263344 16 7355 XP_005263343 16 7355 XP_005263342 16 7355 XP_005263341 16 7355 XP_005263340 16 7355 XP_005263339 16 7355 NP_005742 15 9605 NP_671714 15 9605 NP_689969 15 9605 NP_001272368 15 9605 NP_060318 15 9605 NP_064716 15 9605 NP_660352 15 9605 NP_001192067 15 9605 NP_599025 15 9605 NP_006513 15 9605 NP_001035544 15 9605 NP_001268662 15 9605 NP_075062 15 9605 NP_001268661 15 9605 XP_006718537 15 9605 XP_006718536 15 9605 XP_006718535 15 9605 XP_006715890 15 9605 XP_005250160 15 9605 XP_005250159 15 9605 XP_006714526 15 9605 NP_602298 15 9605 NP_036283 15 9605 NP_001007525 15 9605 NP_001007524 15 9605>NP_056046 Length = 1436 Score = 17.3 bits (33), Expect = 2528 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QCSLSRVR 9 +CSL+R+R Sbjct: 1186 ECSLARIR 1193>XP_006718233 Length = 782 Score = 17.3 bits (33), Expect = 2528 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QCSLSRVR 9 +CSL+R+R Sbjct: 532 ECSLARIR 539>XP_005272458 Length = 271 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VQCSLSRVR 9 +QC LSR++ Sbjct: 163 IQCQLSRLK 171>XP_006716327 Length = 349 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VQCSLSRVR 9 +QC LSR++ Sbjct: 241 IQCQLSRLK 249>NP_699163 Length = 349 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VQCSLSRVR 9 +QC LSR++ Sbjct: 241 IQCQLSRLK 249>NP_115272 Length = 808 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VQCSLSR 7 V+CSLSR Sbjct: 382 VRCSLSR 388>NP_061750 Length = 929 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VQCSLSR 7 V+CSLSR Sbjct: 382 VRCSLSR 388>NP_004477 Length = 1002 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QCSLSRVR 9 +CS+SRV+ Sbjct: 426 ECSMSRVQ 433>XP_005251989 Length = 975 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QCSLSRVR 9 +CS+SRV+ Sbjct: 399 ECSMSRVQ 406>XP_005251988 Length = 1002 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QCSLSRVR 9 +CS+SRV+ Sbjct: 426 ECSMSRVQ 433>XP_005251987 Length = 1029 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QCSLSRVR 9 +CS+SRV+ Sbjct: 453 ECSMSRVQ 460>NP_037386 Length = 729 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 VQCSLSR 7 V CSLSR Sbjct: 265 VSCSLSR 271>NP_116207 Length = 335 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 QCSLSRV 8 QC LSRV Sbjct: 282 QCHLSRV 288>XP_005268867 Length = 729 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 VQCSLSR 7 V CSLSR Sbjct: 265 VSCSLSR 271>XP_005268866 Length = 729 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 VQCSLSR 7 V CSLSR Sbjct: 265 VSCSLSR 271>NP_001257903 Length = 5121 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 VQCSLSRV 8 ++C LSR+ Sbjct: 3726 IRCKLSRI 3733>NP_996766 Length = 685 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 VQCSLSR 7 + CSLSR Sbjct: 393 ISCSLSR 399>NP_945350 Length = 744 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 VQCSLSR 7 + CSLSR Sbjct: 393 ISCSLSR 399>NP_001161434 Length = 712 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 VQCSLSR 7 + CSLSR Sbjct: 393 ISCSLSR 399>NP_996767 Length = 516 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 VQCSLSR 7 + CSLSR Sbjct: 393 ISCSLSR 399>NP_056127 Length = 5005 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VQCSLSRVR 9 V+ SLSR+R Sbjct: 4208 VKVSLSRIR 4216>NP_057340 Length = 515 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 CSLSRVR 9 CS+SRV+ Sbjct: 421 CSVSRVK 427>XP_006721269 Length = 5138 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 VQCSLSRV 8 ++C LSR+ Sbjct: 3743 IRCKLSRI 3750>XP_006716039 Length = 505 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 VQCSLSR 7 + CSLSR Sbjct: 393 ISCSLSR 399>XP_006716038 Length = 239 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 VQCSLSR 7 + CSLSR Sbjct: 127 ISCSLSR 133>XP_006714407 Length = 5004 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VQCSLSRVR 9 V+ SLSR+R Sbjct: 4207 VKVSLSRIR 4215>XP_006714405 Length = 4103 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VQCSLSRVR 9 V+ SLSR+R Sbjct: 3306 VKVSLSRIR 3314>XP_005263349 Length = 4410 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VQCSLSRVR 9 V+ SLSR+R Sbjct: 3613 VKVSLSRIR 3621>XP_005263348 Length = 4443 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VQCSLSRVR 9 V+ SLSR+R Sbjct: 3646 VKVSLSRIR 3654>XP_005263347 Length = 4640 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VQCSLSRVR 9 V+ SLSR+R Sbjct: 4229 VKVSLSRIR 4237>XP_005263346 Length = 4983 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VQCSLSRVR 9 V+ SLSR+R Sbjct: 4186 VKVSLSRIR 4194>XP_005263345 Length = 4991 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VQCSLSRVR 9 V+ SLSR+R Sbjct: 4194 VKVSLSRIR 4202>XP_005263344 Length = 5005 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VQCSLSRVR 9 V+ SLSR+R Sbjct: 4208 VKVSLSRIR 4216>XP_005263343 Length = 5009 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VQCSLSRVR 9 V+ SLSR+R Sbjct: 4212 VKVSLSRIR 4220>XP_005263342 Length = 5025 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VQCSLSRVR 9 V+ SLSR+R Sbjct: 4228 VKVSLSRIR 4236>XP_005263341 Length = 5026 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VQCSLSRVR 9 V+ SLSR+R Sbjct: 4229 VKVSLSRIR 4237>XP_005263340 Length = 5026 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VQCSLSRVR 9 V+ SLSR+R Sbjct: 4229 VKVSLSRIR 4237>XP_005263339 Length = 5026 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VQCSLSRVR 9 V+ SLSR+R Sbjct: 4229 VKVSLSRIR 4237>NP_005742 Length = 3907 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 VQCSLSRVR 9 VQC +VR Sbjct: 2008 VQCQAEKVR 2016>NP_671714 Length = 3899 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 VQCSLSRVR 9 VQC +VR Sbjct: 2008 VQCQAEKVR 2016>NP_689969 Length = 1708 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 1 VQCSLSRV 8 + C LSR+ Sbjct: 216 IDCQLSRI 223>NP_001272368 Length = 1732 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 1 VQCSLSRV 8 + C LSR+ Sbjct: 216 IDCQLSRI 223>NP_060318 Length = 1096 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 QCSLSR 7 QC+LSR Sbjct: 1055 QCALSR 1060>NP_064716 Length = 578 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 VQCSLSRV 8 + C LSRV Sbjct: 9 IACQLSRV 16>NP_660352 Length = 192 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VQCSLSRV 8 V C+LSR+ Sbjct: 149 VLCTLSRI 156>NP_001192067 Length = 174 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VQCSLSRV 8 V C+LSR+ Sbjct: 131 VLCTLSRI 138>NP_599025 Length = 758 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 VQCSLSR 7 V CS+SR Sbjct: 398 VSCSMSR 404>NP_006513 Length = 365 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 VQCSLSRVR 9 VQC RVR Sbjct: 350 VQCHRCRVR 358>NP_001035544 Length = 738 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 VQCSLSR 7 V CS+SR Sbjct: 377 VSCSMSR 383>NP_001268662 Length = 651 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 VQCSLSR 7 V CS+SR Sbjct: 291 VSCSMSR 297>NP_075062 Length = 759 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 VQCSLSR 7 V CS+SR Sbjct: 398 VSCSMSR 404>NP_001268661 Length = 723 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 VQCSLSR 7 V CS+SR Sbjct: 362 VSCSMSR 368>XP_006718537 Length = 192 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VQCSLSRV 8 V C+LSR+ Sbjct: 149 VLCTLSRI 156>XP_006718536 Length = 192 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VQCSLSRV 8 V C+LSR+ Sbjct: 149 VLCTLSRI 156>XP_006718535 Length = 192 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VQCSLSRV 8 V C+LSR+ Sbjct: 149 VLCTLSRI 156>XP_006715890 Length = 3860 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 VQCSLSRVR 9 VQC +VR Sbjct: 1961 VQCQAEKVR 1969>XP_005250160 Length = 3939 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 VQCSLSRVR 9 VQC +VR Sbjct: 2040 VQCQAEKVR 2048>XP_005250159 Length = 3952 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 VQCSLSRVR 9 VQC +VR Sbjct: 2053 VQCQAEKVR 2061>XP_006714526 Length = 1670 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 1 VQCSLSRV 8 + C LSR+ Sbjct: 216 IDCQLSRI 223>NP_602298 Length = 740 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 VQCSLSR 7 V CS+SR Sbjct: 398 VSCSMSR 404>NP_036283 Length = 371 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VQCSLSRV 8 V+C +SRV Sbjct: 267 VRCEVSRV 274>NP_001007525 Length = 371 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VQCSLSRV 8 V+C +SRV Sbjct: 267 VRCEVSRV 274>NP_001007524 Length = 371 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VQCSLSRV 8 V+C +SRV Sbjct: 267 VRCEVSRV 274Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.335 0.131 0.385 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 635,378 Number of extensions: 645 Number of successful extensions: 63 Number of sequences better than 10000.0: 63 Number of HSP's gapped: 63 Number of HSP's successfully gapped: 63 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.5 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |