Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_722576 20 509 XP_005262424 20 509 NP_004677 17 2528 NP_001161693 17 3301 NP_660155 17 3301 XP_005246404 17 3301 XP_005270495 17 3301 XP_006710403 17 3301 NP_001003698 17 4312 NP_001161816 17 4312 NP_001003699 17 4312 NP_001003700 17 4312 XP_006715224 17 4312 XP_005249329 17 4312 XP_006715223 17 4312 XP_006715222 17 4312 XP_005249333 17 4312 XP_006715221 17 4312 XP_006715220 17 4312 XP_005249332 17 4312 XP_006715219 17 4312 NP_115267 17 4312 NP_061746 17 4312 NP_078966 16 5631 NP_001273762 16 5631 NP_001107563 16 5631 NP_001247 16 5631 NP_055061 16 5631 NP_005246 16 5631 XP_006724446 16 5631 XP_006723004 16 5631 XP_006722284 16 5631 XP_006722283 16 5631 XP_006722282 16 5631 XP_005257952 16 5631 XP_006722281 16 5631 XP_006722280 16 5631 XP_005257949 16 5631 XP_005272329 16 5631 XP_006713937 16 5631 XP_005272326 16 5631 XP_005272325 16 5631 NP_000740 15 9605 NP_001276987 15 9605 NP_001154945 15 9605 NP_000685 15 9605 NP_001034230 15 9605 NP_061916 15 9605 XP_006717514 15 9605 XP_005272330 15 9605 XP_005272327 15 9605>NP_722576 Length = 3080 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 VPKSATTQ 8 VPKSATTQ Sbjct: 826 VPKSATTQ 833>XP_005262424 Length = 2875 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 VPKSATTQ 8 VPKSATTQ Sbjct: 621 VPKSATTQ 628>NP_004677 Length = 660 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 VPKSATTQI 9 VPKSAT I Sbjct: 167 VPKSATAHI 175>NP_001161693 Length = 1820 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 PKSATTQI 9 P+SAT+QI Sbjct: 922 PRSATSQI 929>NP_660155 Length = 891 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 PKSATTQ 8 PK+ATTQ Sbjct: 250 PKNATTQ 256>XP_005246404 Length = 1821 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 PKSATTQI 9 P+SAT+QI Sbjct: 923 PRSATSQI 930>XP_005270495 Length = 517 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 PKSATTQ 8 PK+ATTQ Sbjct: 250 PKNATTQ 256>XP_006710403 Length = 878 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 PKSATTQ 8 PK+ATTQ Sbjct: 237 PKNATTQ 243>NP_001003698 Length = 1687 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VPKSATT 7 VPK+ATT Sbjct: 1108 VPKAATT 1114>NP_001161816 Length = 1687 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VPKSATT 7 VPK+ATT Sbjct: 1108 VPKAATT 1114>NP_001003699 Length = 1742 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VPKSATT 7 VPK+ATT Sbjct: 1108 VPKAATT 1114>NP_001003700 Length = 1476 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VPKSATT 7 VPK+ATT Sbjct: 1108 VPKAATT 1114>XP_006715224 Length = 1742 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VPKSATT 7 VPK+ATT Sbjct: 1108 VPKAATT 1114>XP_005249329 Length = 1742 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VPKSATT 7 VPK+ATT Sbjct: 1108 VPKAATT 1114>XP_006715223 Length = 1742 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VPKSATT 7 VPK+ATT Sbjct: 1108 VPKAATT 1114>XP_006715222 Length = 1742 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VPKSATT 7 VPK+ATT Sbjct: 1108 VPKAATT 1114>XP_005249333 Length = 1742 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VPKSATT 7 VPK+ATT Sbjct: 1108 VPKAATT 1114>XP_006715221 Length = 1742 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VPKSATT 7 VPK+ATT Sbjct: 1108 VPKAATT 1114>XP_006715220 Length = 1742 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VPKSATT 7 VPK+ATT Sbjct: 1108 VPKAATT 1114>XP_005249332 Length = 1742 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VPKSATT 7 VPK+ATT Sbjct: 1108 VPKAATT 1114>XP_006715219 Length = 1742 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VPKSATT 7 VPK+ATT Sbjct: 1108 VPKAATT 1114>NP_115267 Length = 811 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 PKSATTQI 9 P+S TTQI Sbjct: 221 PQSGTTQI 228>NP_061746 Length = 931 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 PKSATTQI 9 P+S TTQI Sbjct: 221 PQSGTTQI 228>NP_078966 Length = 14507 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VPKSATTQI 9 VP ATT++ Sbjct: 8440 VPSGATTEV 8448>NP_001273762 Length = 1213 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VPKSATT 7 +PK+ATT Sbjct: 1008 IPKTATT 1014Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VPKSATT 7 VP++ATT Sbjct: 576 VPRNATT 582>NP_001107563 Length = 830 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VPKSATTQI 9 +P S TTQ+ Sbjct: 180 LPNSCTTQV 188>NP_001247 Length = 824 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VPKSATTQI 9 +P S TTQ+ Sbjct: 180 LPNSCTTQV 188>NP_055061 Length = 3014 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 PKSATTQI 9 P+SATT I Sbjct: 332 PRSATTYI 339>NP_005246 Length = 1311 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VPKSATT 7 +PK+ATT Sbjct: 1106 IPKTATT 1112Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VPKSATT 7 VP++ATT Sbjct: 674 VPRNATT 680>XP_006724446 Length = 3019 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 PKSATTQI 9 P+SATT I Sbjct: 332 PRSATTYI 339>XP_006723004 Length = 6443 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VPKSATTQI 9 VP ATT++ Sbjct: 354 VPSGATTEV 362>XP_006722284 Length = 689 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VPKSATTQI 9 +P S TTQ+ Sbjct: 45 LPNSCTTQV 53>XP_006722283 Length = 742 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VPKSATTQI 9 +P S TTQ+ Sbjct: 98 LPNSCTTQV 106>XP_006722282 Length = 763 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VPKSATTQI 9 +P S TTQ+ Sbjct: 119 LPNSCTTQV 127>XP_005257952 Length = 763 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VPKSATTQI 9 +P S TTQ+ Sbjct: 119 LPNSCTTQV 127>XP_006722281 Length = 769 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VPKSATTQI 9 +P S TTQ+ Sbjct: 180 LPNSCTTQV 188>XP_006722280 Length = 799 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VPKSATTQI 9 +P S TTQ+ Sbjct: 180 LPNSCTTQV 188>XP_005257949 Length = 823 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VPKSATTQI 9 +P S TTQ+ Sbjct: 180 LPNSCTTQV 188>XP_005272329 Length = 1175 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VPKSATT 7 +PK+ATT Sbjct: 970 IPKTATT 976Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VPKSATT 7 VP++ATT Sbjct: 538 VPRNATT 544>XP_006713937 Length = 1249 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VPKSATT 7 +PK+ATT Sbjct: 1044 IPKTATT 1050Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VPKSATT 7 VP++ATT Sbjct: 612 VPRNATT 618>XP_005272326 Length = 1262 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VPKSATT 7 +PK+ATT Sbjct: 1057 IPKTATT 1063Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VPKSATT 7 VP++ATT Sbjct: 674 VPRNATT 680>XP_005272325 Length = 1300 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VPKSATT 7 +PK+ATT Sbjct: 1095 IPKTATT 1101Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VPKSATT 7 VP++ATT Sbjct: 674 VPRNATT 680>NP_000740 Length = 458 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 VPKSATT 7 +P SATT Sbjct: 14 IPSSATT 20>NP_001276987 Length = 351 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VPKSATTQI 9 VPK+ TQ+ Sbjct: 87 VPKNLATQL 95>NP_001154945 Length = 468 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VPKSATTQI 9 VPK+ TQ+ Sbjct: 87 VPKNLATQL 95>NP_000685 Length = 468 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VPKSATTQI 9 VPK+ TQ+ Sbjct: 87 VPKNLATQL 95>NP_001034230 Length = 2365 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 VPKSATTQ 8 +P+S++TQ Sbjct: 823 IPRSSSTQ 830>NP_061916 Length = 666 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 PKSATTQ 8 PK+ TTQ Sbjct: 458 PKTGTTQ 464>XP_006717514 Length = 666 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 PKSATTQ 8 PK+ TTQ Sbjct: 458 PKTGTTQ 464>XP_005272330 Length = 1140 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VPKSATT 7 VP++ATT Sbjct: 674 VPRNATT 680>XP_005272327 Length = 1236 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VPKSATT 7 VP++ATT Sbjct: 674 VPRNATT 680Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.303 0.112 0.283 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 433,830 Number of extensions: 616 Number of successful extensions: 57 Number of sequences better than 10000.0: 51 Number of HSP's gapped: 57 Number of HSP's successfully gapped: 57 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.4 bits) S2: 28 (15.4 bits)
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |